LOCUS       XM_017595750            3736 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cAMP regulated phosphoprotein 21
            (Arpp21), transcript variant X6, mRNA.
ACCESSION   XM_017595750
VERSION     XM_017595750.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017595750.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017595750.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3736
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3736
                     /gene="Arpp21"
                     /gene_synonym="Arpp-21; Ppp1r1c; Ppp1r1cl; RGD1307208;
                     RGD1307215"
                     /note="cAMP regulated phosphoprotein 21; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 8 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     45 samples with support for all annotated introns"
                     /db_xref="GeneID:363153"
                     /db_xref="RGD:1593239"
     CDS             681..3215
                     /gene="Arpp21"
                     /gene_synonym="Arpp-21; Ppp1r1c; Ppp1r1cl; RGD1307208;
                     RGD1307215"
                     /codon_start=1
                     /product="cAMP-regulated phosphoprotein 21 isoform X1"
                     /protein_id="XP_017451239.1"
                     /db_xref="GeneID:363153"
                     /db_xref="RGD:1593239"
                     /translation="MSEQGELTPTILEEGRTEPESAPENGILKSESLDEEEKLELQRR
                     LAAQNQERRKSKSGAGKGKLTRSLAVCEESSARPGGESHQDQESIHLQLSSFPSLQEE
                     DKSRKDDSEREKEKDKNREKLSERPKIRMLSKDCSQEYTDSTGIDLHEFLINTLKNNS
                     RDRMILLKMEQEMIDFIADSNNHYKKFPQMSSYQRMLVHRVAAYFGLDHNVDQTGKSV
                     IINKTSSTRIPEQRFCEHLKDEKSEESQKRFILKRDNSSIDKEDNQQNRMHPFRDDRR
                     SKSIEEREEEYQRVRERIFAHDSVCSQESLFLDNSRLQEDMHICNETYKKRQLFRAHR
                     DSSGRTSGSRQSSSETELRWPDHQRAWSSTDSDSSNRNLKPTMTKTASFGGITVLTRG
                     DSTSSTRSAGKLSKTGSESSSSAGSSGSLSRTHPPLQSTALTSSVAAGSPGCMAYSEN
                     GMGGQVPPSSTSYILLPLESATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPGSQQTL
                     RGTVSGQPQQPPPQQPSPQPQQQVQASQPQMTGPLVTQSVQGLQPSSQSVQYPAVSFP
                     PQHLLPVSPTQHFPLREEMAAQFSQLSMSRQSSGDTPEPPSGPVYPASLMQAAQPPSY
                     VITSAGQQLSTGGFSDSGPPISQQVLQAPPSPQGFVQQPPPAQMSVYYYPSGQYPTST
                     TQQYRPLASVQYSAQRSQQIPQTAQQAGYQPVLSGQQSFQGLMGVQQSAHSQGVMSSQ
                     QGAPVHGVMVSYPTMSSYQVPMTQGSQAVPQQTYQPPIMLPSQTGQGSLPATGMPVYC
                     NITPPSPQNNLRLMGPHCPSSTVPVMSASCRTNCGSMNNAGWPVKF"
ORIGIN      
        1 atgatcattt ccctgtctgc cttctcaaag gaagcagctt cttcgagcaa gaatgacagc
       61 ctctaacatg aaaatgaatc tgtaaatttt tttttcaaaa tttgctccga tgcaaaatga
      121 atctaaactg tgcccacccc ttcctggtct gccttggaga ccaactctgc agtttattgc
      181 ttcaagtaag cagcgaagta gacagggcag gcaggaaggc actccttgtt ttctaattct
      241 gtgaaagtca gaaagccttg gatatgctct tcagcacgag tagacccttt cctttcttct
      301 tcaggattat gttagcatag ggcttgatgt ctgaatagcc ttttagctaa tttcattttc
      361 gtgagagaca gtcatttgga aggctcagga gctggttatg cttccttcaa atagcagagt
      421 gatcctaacg tgagagaccc tgtcttcagg gttatgtagc tcttcaaggt tgtcgaccat
      481 gtgtcaagct gtgtagggaa actgcctgga gatggacatt ctggactgct aatggggaca
      541 tgggacggca gttacctctg atcacttgcg tggattctcc tggagcagaa agacagaagc
      601 cgccagtcac tcgtccggat ctagcactgg gattctgtgc tgaagggtct aaaaactcgt
      661 tttgatttgg atctgggaga atgtctgagc aaggagaact aaccccgacc atactggaag
      721 aagggcggac agagccagaa tctgccccag aaaatggcat cctcaagtca gaaagtctgg
      781 atgaggagga gaagctggaa ctgcagcggc gactggcagc tcagaaccaa gagagaagaa
      841 aatccaagtc aggagcaggt aaagggaagc tgaccagaag tcttgctgtc tgtgaagagt
      901 cttcagccag acctggaggg gaaagtcacc aggatcagga atcaattcac ttacagcttt
      961 ccagtttccc cagcctgcaa gaggaggata aatctaggaa ggatgactct gagagagaaa
     1021 aagaaaagga taagaacaga gagaaactct ctgagagacc caagatcaga atgttatcga
     1081 aagattgcag ccaagaatat acggattcta caggcataga cttacatgag tttctaatta
     1141 acacgctgaa gaacaactcc agggacagga tgatactctt gaaaatggag caggaaatga
     1201 ttgatttcat tgctgacagc aataaccact ataaaaagtt cccccagatg tcatcctatc
     1261 agaggatgct ggtccatcgg gtggcagcgt acttcgggtt ggaccacaat gtggatcaaa
     1321 ctggaaaatc tgtcatcatc aacaagacca gcagcaccag aataccagag caaaggtttt
     1381 gtgaacattt aaaagatgaa aagagtgaag aatcccagaa gcggtttatc ttgaagcgag
     1441 ataactctag tattgataaa gaagacaatc agcagaacag aatgcaccca tttagagatg
     1501 acagacgaag taaatcaatt gaagagagag aagaggaata tcagagagtg agggagagaa
     1561 tatttgcaca cgattcagtt tgctcccagg aaagcctatt tttggataac agtaggctcc
     1621 aggaagatat gcacatatgc aatgagacct ataagaaaag acagctcttt cgggctcacc
     1681 gagacagctc aggaagaact tccgggagcc ggcagagcag ctcagagact gagctcaggt
     1741 ggccagacca ccagcgagcc tggagcagca cagattctga cagctccaac cgcaatctga
     1801 agcccaccat gaccaagact gcaagttttg ggggcatcac ggtgctgacc aggggcgaca
     1861 gcacatccag tactaggagt gctgggaaac tgtccaaaac aggttctgag tcttccagca
     1921 gtgcaggctc ctcaggatca ctgtcccgca cccacccgcc tctgcagagc acagccctga
     1981 cctctagtgt ggcagctggc tctcctggct gtatggccta ttcagagaat ggaatggggg
     2041 gccaggttcc tcccagcagc accagctaca tcctcctccc acttgaaagc gcgactggca
     2101 tcccacctgg aagcatcctt cttaatccac acacaggtca gccctttgtg aacccggatg
     2161 gaactcctgc gatatacaac cctcccggaa gtcagcagac gctgcgtggc actgtcagtg
     2221 ggcagcctca acaaccccca ccacagcaac cgtctcctca gcctcagcag caggtccagg
     2281 catcacagcc tcagatgaca gggccactgg tcactcagtc tgtccagggc ctgcagccat
     2341 cttcccagtc tgtgcaatat ccagcggtct ctttccctcc ccagcatctc ctgcctgtgt
     2401 cgccaacgca gcacttcccc ctgagagaag agatggctgc gcagttcagt cagctgagca
     2461 tgagcaggca gtcctcggga gacactcctg aacctccctc tggtccagtc tacccagcct
     2521 ccctcatgca agcagctcag ccaccaagct acgtcatcac ttctgcaggc cagcagctct
     2581 ccacaggggg tttctcggac tctggcccgc ccatctccca gcaggtcctg caggccccgc
     2641 cctctcccca gggatttgta cagcagcctc cacctgcgca gatgtccgta tattactacc
     2701 catctggtca gtaccctacc tcaaccacac agcagtaccg acccctggcc tcagtccagt
     2761 acagcgctca gaggagtcag caaataccac agaccgcgca gcaagcaggt taccagccag
     2821 tcttgtctgg tcaacagagc tttcaaggcc tgatgggagt acagcagtca gctcacagcc
     2881 agggggtgat gagcagtcag caaggagccc cggtgcatgg tgtgatggtc tcctacccaa
     2941 ccatgtcttc ttatcaggtg ccaatgaccc aaggttctca agcagtgccc cagcagacat
     3001 accaaccgcc aatcatgctg cccagtcaga caggccaagg gtcactccca gccaccggaa
     3061 tgcctgtgta ctgtaacatc acaccgccaa gccctcagaa caacctaagg ttgatgggtc
     3121 cacactgccc ctccagcacg gttcctgtca tgtctgctag ctgcagaaca aactgtggga
     3181 gcatgaacaa cgctggctgg ccggtcaagt tctgagagtg ctcgggctgc ccgcggtaca
     3241 cttcatcata tgttaactca tggccttcaa aggaagagga gacttcgaca gctggctgag
     3301 gacttccata tacattgctg ctggtattct gtacaaacta atcaaagact aatacattag
     3361 ctggttaatg gtgcatattt ctgtcatgtc tgctaggtat gcctttctag cttagctagg
     3421 gacatgaatt catcaaggta agattttctc ctaccatgaa taccactgtg tagattacaa
     3481 tatccctgat tcggattagt tttgtacttt gtgttcagtt tgtgatgcta aaagtattta
     3541 aatatatata tatataaact aaatcacacg gtaccaaagc tgtaacggaa caaaaggaaa
     3601 gagttgagga atggaaggaa taatttatat acactataga gttttctttt ttaaatggat
     3661 atatatggta ttgtagtgtt taacgcaaat aaaagcttat ttgaccttac ggaggaaggt
     3721 catgttttta ccacca
//
