LOCUS       NM_001037767            1291 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus actin related protein 2/3 complex, subunit 5-like
            (Arpc5l), mRNA.
ACCESSION   NM_001037767 XM_216047
VERSION     NM_001037767.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1291)
  AUTHORS   Biesemann,C., Gronborg,M., Luquet,E., Wichert,S.P., Bernard,V.,
            Bungers,S.R., Cooper,B., Varoqueaux,F., Li,L., Byrne,J.A.,
            Urlaub,H., Jahn,O., Brose,N. and Herzog,E.
  TITLE     Proteomic screening of glutamatergic mouse brain synaptosomes
            isolated by fluorescence activated sorting
  JOURNAL   EMBO J 33 (2), 157-170 (2014)
   PUBMED   24413018
REFERENCE   2  (bases 1 to 1291)
  AUTHORS   Kuo,J.C., Han,X., Hsiao,C.T., Yates,J.R. 3rd and Waterman,C.M.
  TITLE     Analysis of the myosin-II-responsive focal adhesion proteome
            reveals a role for beta-Pix in negative regulation of focal
            adhesion maturation
  JOURNAL   Nat Cell Biol 13 (4), 383-393 (2011)
   PUBMED   21423176
REFERENCE   3  (bases 1 to 1291)
  AUTHORS   Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J., Wauben,M.
            and Stoorvogel,W.
  TITLE     MHC class II-associated proteins in B-cell exosomes and potential
            functional implications for exosome biogenesis
  JOURNAL   Immunol Cell Biol 88 (8), 851-856 (2010)
   PUBMED   20458337
REFERENCE   4  (bases 1 to 1291)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FM029541.1 and BC127445.1.
            
            On Mar 5, 2010 this sequence version replaced NM_001037767.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC127445.1, CO555020.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-447               FM029541.1         1-447
            448-1291            BC127445.1         377-1220
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q12"
     gene            1..1291
                     /gene="Arpc5l"
                     /gene_synonym="Arpc5l1"
                     /note="actin related protein 2/3 complex, subunit 5-like"
                     /db_xref="GeneID:296710"
                     /db_xref="RGD:1308867"
     exon            1..208
                     /gene="Arpc5l"
                     /gene_synonym="Arpc5l1"
                     /inference="alignment:Splign:2.1.0"
     CDS             60..521
                     /gene="Arpc5l"
                     /gene_synonym="Arpc5l1"
                     /note="ARC16-2; arp2/3 complex 16 kDa subunit 2; actin
                     related protein 2/3 complex, subunit 5-like 1"
                     /codon_start=1
                     /product="actin-related protein 2/3 complex subunit 5-like
                     protein"
                     /protein_id="NP_001032856.2"
                     /db_xref="GeneID:296710"
                     /db_xref="RGD:1308867"
                     /translation="MARNTLSSRFRRVDIDEFDENKFVDEHEEAAAASGEPGPDPCEV
                     DGLLRQGDMLRAFHAALRNSPINTKNQAVKERAQGIVLKVLTNFKSSEIEQAVQSLDR
                     NGIDLLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVLTARKTV"
     exon            209..281
                     /gene="Arpc5l"
                     /gene_synonym="Arpc5l1"
                     /inference="alignment:Splign:2.1.0"
     exon            282..458
                     /gene="Arpc5l"
                     /gene_synonym="Arpc5l1"
                     /inference="alignment:Splign:2.1.0"
     exon            459..1269
                     /gene="Arpc5l"
                     /gene_synonym="Arpc5l1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggagggag ccggtacgga gcgaagccta ggcggctggg cggccgccgc gctcccgcca
       61 tggcccggaa cacactgtcc tcacgcttcc gccgagtgga tatcgacgaa tttgacgaga
      121 acaaattcgt agacgagcac gaagaggcgg cggcggcgtc gggcgagcca ggccccgacc
      181 cctgcgaggt agacgggctc ctgcggcaag gggacatgct tcgggcattc catgcagcct
      241 tgcggaactc tccaatcaac accaagaatc aagctgtgaa ggaacgagcc cagggtatag
      301 tcctgaaagt actcacaaac ttcaagagca gcgagattga gcaggctgtg cagtcactgg
      361 acaggaatgg cattgacttg ctaatgaagt acatttataa agggtttgag aagcccacag
      421 aaaatagcag tgcagtgtta ctccagtggc atgaaaaggc tttagctgtt ggaggactag
      481 gctccattat aagagttctt acagcaagaa agactgttta aaaaaaaaaa aagaatcctg
      541 ttaccttgag aagaattttg gatgcccagg ctagtgaaga agggactgac aatggaccat
      601 cttcctagaa ctcccaacta aatacttcag gacacatctg ctggaatgta ttttactttt
      661 gaggtggagg gagaaattgt cttattgatt cctaaattct ttgcaggacc agagtgtctg
      721 cctttgtcta cagagtaaca cagaaccaac acttgactat ctggctgact ggccagatta
      781 tgtgaggtgt acctgtgagc actgtctgtt tggaatgggg agggactatt tgggcaggtg
      841 cagacccaag ggctgtggtg aaaaggagag cttgggttct gaagtggaaa aaacctgatg
      901 agagtttgta cagacatcct gtcttctcag agaaggcagg ctctcttggg ttcattgtaa
      961 agtgcctgct gcatcaataa agctcttggc ttattagtct attcattgaa gtgtgttctc
     1021 tgtatgttaa atggtaaaga aagggatagc aatgaatgat gacagtttgg tttggaaagc
     1081 tgatgtccct gtcctgccat ccttggggac ggggaaagcg agcatggtga taccacagct
     1141 atgccatact ttaactgcag tggtgctgga tgctaccgag agacattttg ctgagtgttt
     1201 atttttctta ctcttttgat ttgtatgtaa ttttggagct tatttaataa agtgccaaac
     1261 ctttaatgaa aaaaaaaaaa aaaaaaaaaa a
//
