LOCUS       NM_001402549            3681 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus armadillo-like helical domain containing 3
            (Armh3), mRNA.
ACCESSION   NM_001402549 XM_574677
VERSION     NM_001402549.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3681)
  AUTHORS   Chan,C.J., Le,R., Burns,K., Ahmed,K., Coyaud,E., Laurent,E.M.N.,
            Raught,B. and Melancon,P.
  TITLE     BioID Performed on Golgi Enriched Fractions Identify C10orf76 as a
            GBF1 Binding Protein Essential for Golgi Maintenance and Secretion
  JOURNAL   Mol Cell Proteomics 18 (11), 2285-2297 (2019)
   PUBMED   31519766
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Mar 17, 2022 this sequence version replaced XM_574677.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.124612.1,
                                           SRR26360176.2461716.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                JAXUCZ010000001.1  254797487-254797572 c
            87-199              JAXUCZ010000001.1  254781203-254781315 c
            200-256             JAXUCZ010000001.1  254776371-254776427 c
            257-403             JAXUCZ010000001.1  254776120-254776266 c
            404-511             JAXUCZ010000001.1  254773584-254773691 c
            512-604             JAXUCZ010000001.1  254769438-254769530 c
            605-679             JAXUCZ010000001.1  254768724-254768798 c
            680-766             JAXUCZ010000001.1  254768526-254768612 c
            767-823             JAXUCZ010000001.1  254764583-254764639 c
            824-867             JAXUCZ010000001.1  254762832-254762875 c
            868-928             JAXUCZ010000001.1  254761314-254761374 c
            929-975             JAXUCZ010000001.1  254758177-254758223 c
            976-1051            JAXUCZ010000001.1  254757155-254757230 c
            1052-1145           JAXUCZ010000001.1  254755130-254755223 c
            1146-1247           JAXUCZ010000001.1  254750244-254750345 c
            1248-1306           JAXUCZ010000001.1  254743138-254743196 c
            1307-1372           JAXUCZ010000001.1  254739289-254739354 c
            1373-1442           JAXUCZ010000001.1  254737671-254737740 c
            1443-1503           JAXUCZ010000001.1  254736076-254736136 c
            1504-1592           JAXUCZ010000001.1  254723065-254723153 c
            1593-1675           JAXUCZ010000001.1  254694076-254694158 c
            1676-1802           JAXUCZ010000001.1  254693210-254693336 c
            1803-1878           JAXUCZ010000001.1  254687462-254687537 c
            1879-1957           JAXUCZ010000001.1  254645998-254646076 c
            1958-2074           JAXUCZ010000001.1  254618336-254618452 c
            2075-3681           JAXUCZ010000001.1  254615274-254616880 c
FEATURES             Location/Qualifiers
     source          1..3681
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q54"
     gene            1..3681
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /note="armadillo-like helical domain containing 3"
                     /db_xref="GeneID:103689959"
                     /db_xref="RGD:9299787"
     exon            1..86
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            87..199
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     CDS             98..2167
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /note="UPF0668 protein C10orf76 homolog"
                     /codon_start=1
                     /product="armadillo-like helical domain-containing protein
                     3"
                     /protein_id="NP_001389478.1"
                     /db_xref="GeneID:103689959"
                     /db_xref="RGD:9299787"
                     /translation="MAQVEKRGGLLRKSSASKKPLKEKVVLMYDEIFMTEDPSKCSPR
                     FWEELFLMKVNLEYLEGKLESLDGEELMKIKDNINCLFQHCIQALGEEHPIRVVNALQ
                     TLCALIRGVHQKNKSTSGFDIINMLMGFDKAELCMKNLMESLDSLLCAEGSESLKSLC
                     LKLLLCLVTVTDNISQNTILEYVMINSIFEAILQILSHPPSRREHGYDAVVLLALLVN
                     YRKYESVNPYIVKLSIVDDEATLNGMGLVITQALSEYNRQYKDKEEEHQSGFFSALTN
                     MVGSMFIADAHEKISVQTNEAILLALYEAVHLNRNFITVLAQSHPEMGLVTTPVSPTP
                     TTPATPLGTTPPSSDVISSVELSLDADVQTSNLLITFLKYSSIVMQDTKDEHRLHSGK
                     LCLIILTCIAEDQYANAFLHDDNMNFRVNLHRMPMRHRKKAADKNLPCRPLVCAVLDL
                     MVEFIVTHMMKEFPMDLYVRCVQVVHKLLCYQKKCRVRLHYTWRELWSALINLLKFLM
                     SNETVLLAKHNIFTLTLMIVNLFNMFITYGDTFLPTPSSYDELYYEIIRMHQSFDNLY
                     CMVLRLSTNAGQWKEAASKVTHALVNIRAIVSHFTPKIESYAAVNHISQLSEEQVLEV
                     VRANYDTLTLKLQDGLDQYERYSEQHKEAAFFKELVRSISTNVRRNLAFHTLSQEALL
                     KEFSTIS"
     exon            200..256
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            257..403
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            404..511
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            512..604
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            605..679
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            680..766
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            767..823
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            824..867
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            868..928
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            929..975
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            976..1051
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1052..1145
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1146..1247
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1248..1306
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1307..1372
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1373..1442
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1443..1503
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1504..1592
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1593..1675
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1676..1802
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1803..1878
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1879..1957
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            1958..2074
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
     exon            2075..3681
                     /gene="Armh3"
                     /gene_synonym="C1H10orf76; RGD1564887"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgattccgg agcagtggcg gcgtcgccgg agtcgggagc gagcaggcct gcgagctgct
       61 agggtgctag agaagccggg ggctcggttc tctagccatg gcacaagtag agaaacgagg
      121 aggcttgctc cggaaatcct cagcctcaaa gaaaccactg aaggagaaag tggtgctgat
      181 gtatgacgag attttcatga cggaggaccc cagtaagtgt agtcctcggt tttgggagga
      241 gctctttctc atgaaggtga atttagagta tctggaaggc aagctggagt ctctggatgg
      301 ggaggagcta atgaagatca aggacaacat taattgttta ttccagcact gtatccaggc
      361 tctgggggag gagcacccca tccgagtcgt caacgcattg cagaccttgt gtgcacttat
      421 tcgaggagtc caccagaaga ataagtctac gtctggattt gacatcatca atatgctgat
      481 gggctttgac aaggcggagc tgtgcatgaa gaacttgatg gagagtttgg attcattact
      541 ctgtgcagaa ggttctgaaa gtctgaagag tctatgtctg aaacttcttc tttgcttagt
      601 gactgttaca gataacatca gtcagaacac tatcctggag tatgtaatga tcaacagcat
      661 atttgaagca attttacaga tactatccca tcccccaagt cgtagagaac atgggtatga
      721 tgctgttgtc ctcttggctt tgctggtcaa ctacagaaaa tatgagtctg tgaatcctta
      781 cattgtgaag ctgtctattg tggatgatga ggctacgctg aatggaatgg ggcttgtgat
      841 cactcaggct ttatctgagt acaacaggca gtataaagac aaggaagaag aacatcagag
      901 tggttttttt tctgctttaa caaatatggt gggcagcatg ttcatagcag acgcccatga
      961 gaaaatctca gttcaaacca atgaggccat tcttctcgca ctttatgaag ctgtccattt
     1021 aaatcgaaac ttcatcacag ttttagctca gagccatcca gagatggggt tggtgacaac
     1081 ccctgtcagc cctactccta caaccccagc cacaccactt gggactacac cgccttcctc
     1141 tgatgttata agttccgtgg agctctcact ggacgcagat gtacagacca gcaatctcct
     1201 gataaccttc ttaaagtaca gctcaatcgt catgcaggac accaaggatg aacacaggct
     1261 tcacagtggc aagctctgtc tgatcatcct cacgtgtatc gcagaggatc agtatgccaa
     1321 cgccttttta cacgatgaca acatgaactt ccgggtaaac ctacacagaa tgcctatgag
     1381 acacaggaag aaggctgctg acaagaatct tccctgccgt cccctggtgt gcgcagtcct
     1441 ggacctgatg gtggagttca ttgtaacgca catgatgaag gaattcccta tggatctcta
     1501 tgtgcggtgt gtccaagtag tgcacaaact gctgtgttac cagaagaagt gtagagttcg
     1561 cctgcattac acctggcggg aactctggtc agccttgata aacttgctga agttccttat
     1621 gtcaaatgaa actgtacttt tggccaaaca caacattttt acattgaccc ttatgattgt
     1681 gaacctattt aacatgttca tcacatacgg tgacacattc ctgccaaccc ccagcagcta
     1741 tgacgagctt tactatgaga ttatccgcat gcaccagagc tttgacaacc tctactgcat
     1801 ggtccttagg ctttccacca acgctggcca gtggaaggaa gcagcgagca aggtgacaca
     1861 cgcattggtg aatatcagag ccatcgtcag tcactttact cccaaaattg agtcctacgc
     1921 tgctgtgaac cacatctctc aactctcaga ggaacaggta ctagaggtag tgcgagccaa
     1981 ctacgacaca ctcacactga agctgcaaga tggcctggac cagtatgagc gctactctga
     2041 gcagcacaag gaggccgcct tcttcaaaga gctggttcgg tccattagta ccaacgtccg
     2101 gaggaacctc gccttccaca cactcagcca ggaagccctc ctgaaggagt tctccaccat
     2161 ctcctgaggc tgcactgcct gagagccact gactgcctta cccatgaggc tcctgggctg
     2221 gagggcgagc aaaaggagtg gggactgcct tcaaggttgg agagaagcac agaccccgag
     2281 gctcttggtg aaggccgtac ttcagtgagc ttggacagca agggcaagcc caggatggtc
     2341 ttatttggga gaaatgggag ggtaatggga gaggcaacct aaagtgtggg atttccaggc
     2401 tgcattccct ggatactgcc tcatgattcc agttgagatt ccacgttctg gcttctgatt
     2461 attcgggtgc tggttggtca gtccgcagct gatgccaaca ctctgaaggc aaacggctgt
     2521 tcttggctga tgccacatcc tgtttctttt tggacctgga gctgagcaag gcccctgccc
     2581 ccactgcagt ctgcgcagtc cttagcacct cagttctggc acagagtagg tcagggattg
     2641 gcgccttttt ctgtcttcta aattcaaagt tgacacctct gagagactgg agattggatc
     2701 tgcctggtgc tctgctgtcc gacctctcct ttctggattt tagttttggc accaggagca
     2761 cctgttcctt tccttgcctt cccacgttga ctcgtcaaca caataggccc acaactttag
     2821 ccttgccttt ttagtgtttt aaactgtctt aaaagagtct gtgtgaaata aacattgaca
     2881 ggttttctgg agccctcaag gtgcctactt tgctggttcc ctttccagca gctcccccct
     2941 ccccacccac ccctccagtg ggagcctaga tgagctcccc tccacgtgtt ccaccccctc
     3001 accctgctgt tgtttacatt cagcctgcct aagaatttcc tctggggagg aatctgttcc
     3061 tgctgtggtc tggtgctggg agagaacctg ctgggggtag agtgctgttc atccggacag
     3121 cctaggtgag catcatgcct cgagcctcca tcttgtccag ccatactgta gctgggtctc
     3181 gagcacatcc aacctccatg aagctggcct gtggattcta tcatcggaca gtctccgtgg
     3241 aaccactgta gggttctccc tgtcccacag atgcccctga aatagctgct gctcggaggt
     3301 ccctccagtc taaagctttg tgaagcccca ggatggccag ggcaagcagc aagtgagggt
     3361 ctgagggggg ctgagggtag gtctggggct ttctgagctc ctgtctgttt agcatctgtc
     3421 tctttgggat acttgcctcc ctggaagcca gagttctgat tgagcagaag tataatagtt
     3481 ctagagaatt tgtcggcaga ctgacatgca tagatgtaga accttaagcc attgtggggt
     3541 gcatcatctc tattcactgg tcaccagatg ggtaacttga cctgaggtgt ttagtgttcc
     3601 ccatggttat gaaccccaga gcagctggat ctggagctgg tggcaaatca aagctattaa
     3661 aagttgatct gtgtgtcttt a
//
