LOCUS       NM_001126297            1830 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus armadillo-like helical domain containing 1
            (Armh1), mRNA.
ACCESSION   NM_001126297 XM_001071869 XM_575892
VERSION     NM_001126297.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Mar 4, 2009 this sequence version replaced NM_001126297.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-162               JAXUCZ010000005.1  135958465-135958626 c
            163-299             JAXUCZ010000005.1  135946302-135946438 c
            300-527             JAXUCZ010000005.1  135943793-135944020 c
            528-596             JAXUCZ010000005.1  135937309-135937377 c
            597-763             JAXUCZ010000005.1  135935869-135936035 c
            764-960             JAXUCZ010000005.1  135933023-135933219 c
            961-1045            JAXUCZ010000005.1  135930172-135930256 c
            1046-1168           JAXUCZ010000005.1  135921034-135921156 c
            1169-1241           JAXUCZ010000005.1  135920888-135920960 c
            1242-1371           JAXUCZ010000005.1  135919945-135920074 c
            1372-1449           JAXUCZ010000005.1  135919784-135919861 c
            1450-1531           JAXUCZ010000005.1  135919438-135919519 c
            1532-1830           JAXUCZ010000005.1  135919057-135919355 c
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1830
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /note="armadillo-like helical domain containing 1"
                     /db_xref="GeneID:500531"
                     /db_xref="RGD:1563714"
     exon            1..162
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     exon            163..299
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     exon            300..527
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     CDS             322..1647
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /note="uncharacterized protein C1orf228 homolog"
                     /codon_start=1
                     /product="armadillo-like helical domain containing protein
                     1"
                     /protein_id="NP_001119769.2"
                     /db_xref="GeneID:500531"
                     /db_xref="RGD:1563714"
                     /translation="MTSIKEQAAISRLLSFLQEWDNAGKSLRTQILTTFIETNQGKTG
                     PELELEFSQGASLFLIRVTTWLRIIYMTGLDLEMILRSIGIFLSAVSSNRYLIEFLEI
                     GGVLTLLEILGLEKIKEEDKKESIKLLQIIANTGRKYKELICESYGVRAIAEFLAKSK
                     SEETQEEVQVLLDTLVHGNPKYQNQVYKGLIALLPCGSPKAQQLALQTLKTAQSIVGA
                     THPSIVDCVLMVLSTVHLEVQYEAIELIKDLIHYDVRLPLLKGLIAMLIPPVKETSKL
                     QARIFSDSSILQITTQLPVFLQQAAAAKTIGILARSDLNLAEEMLHLRVIHSLMSAMG
                     NTDHSNSQRLASLTLEYFVQMFPLVEEHVRNSMGEELYQLFLSDAEILYTKIDSIQAD
                     ILAANKVNVTRDSCDHINNSCISFSTSSDASNQVGGISDFEKLHSESRE"
     exon            528..596
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     exon            597..763
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     exon            764..960
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     exon            961..1045
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     exon            1046..1168
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     exon            1169..1241
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     exon            1242..1371
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     exon            1372..1449
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     exon            1450..1531
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
     exon            1532..1830
                     /gene="Armh1"
                     /gene_synonym="RGD1563714"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagtcgcttc gcgcctcggg cggcacccac tagtcgggtc ctagcaaccg cgctccgccc
       61 ctactgtctt tgggccccag caattggctg actctcttga tcttggatca agcattggtc
      121 agtggggcag cgctcttgga gagtacccac cctcccgtga aggttgatcc acacttgtcc
      181 cgtcccctca ccccagcccc cagttctaga aactgattgg accttgtgat gtcttcctga
      241 agctgcgtgg gtgcccttcc caggagcaca gacccagtgt cctctgggga acagtggagt
      301 caatctcggg gctgactggc catgacctct ataaaagagc aggcagccat cagccggctt
      361 ctaagttttt tgcaagaatg ggacaacgct ggcaaaagcc tacgaaccca gattctcacc
      421 accttcatcg aaaccaacca aggcaagact ggccctgagt tggagctgga gttttcccaa
      481 ggagccagtt tgtttctcat acgagtgacc acctggctta gaatcatcta tatgactggc
      541 ttggatttag aaatgatcct gagatccatt ggcatcttct tatctgctgt gagcagcaat
      601 cggtacctga tagaatttct tgagattggc ggtgtcctaa cactcttgga aatacttggc
      661 ctagagaaga tcaaggaaga ggacaaaaag gaatccatca aactacttca gattattgca
      721 aacactggca ggaagtacaa ggagctcatc tgtgagagct atggtgtgag agccatagca
      781 gaatttctgg caaagtctaa atcagaagag acccaggagg aagtgcaggt tctgctggat
      841 acgttggtcc atggcaatcc caagtaccag aaccaagtat acaaaggcct aatagccctc
      901 ctgccctgcg ggtccccgaa agcccagcaa ctggccctgc agactctcaa gactgcccag
      961 tcgatcgttg gagcaacaca ccccagcatc gtggactgcg tgctgatggt cctgagcaca
     1021 gtgcacctgg aggtgcagta tgaagccatc gagctgataa aagacctgat ccactacgac
     1081 gtgcgcttgc ctctgctcaa gggcctcata gccatgctca tccctccagt caaggaaaca
     1141 tccaaactgc aggccaggat cttcagtgac tcttcgattc tccagatcac cacccagctg
     1201 cctgtgttcc tgcagcaggc tgcggctgcc aagactattg ggatcctggc acggagcgac
     1261 ttgaacttgg cggaggagat gctgcacctg cgcgtgattc acagcctgat gtcggccatg
     1321 ggtaacactg accacagcaa tagccagagg ctggccagcc tcacactgga gtacttcgtg
     1381 cagatgttcc cgttggtgga ggaacacgtc cgaaactcca tgggggaaga actctaccag
     1441 ctcttcctca gcgatgctga gatcttgtat acaaaaatag atagcattca agcggacatc
     1501 ttggcagcca acaaagtcaa tgttaccaga gacagctgcg accacatcaa caacagctgc
     1561 atcagcttct ccaccagctc tgacgcttcg aatcaggtgg gaggcatcag cgactttgag
     1621 aagcttcatt cagaatccag ggagtgacag agcccctgtg gcaaaccagg aaggccaagg
     1681 ttgtgcctcg tggaagcctg cctgtcggga gggtggcacc gagaggacgg tgccgtttgg
     1741 ccctggggag gaggctgagt attagaaaac gcagtgggga agggggaagc tatttctgca
     1801 gaagggtcta ataaaaggtc ttgatgttac
//
