LOCUS       XM_006257238            8158 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus armadillo repeat containing, X-linked
            4 (Armcx4), transcript variant X3, mRNA.
ACCESSION   XM_006257238
VERSION     XM_006257238.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006257238.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006257238.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8158
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8158
                     /gene="Armcx4"
                     /note="armadillo repeat containing, X-linked 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 ESTs, 3 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     63 samples with support for all annotated introns"
                     /db_xref="GeneID:100359678"
                     /db_xref="RGD:2325053"
     CDS             695..7813
                     /gene="Armcx4"
                     /codon_start=1
                     /product="armadillo repeat-containing X-linked protein 4
                     isoform X1"
                     /protein_id="XP_006257300.1"
                     /db_xref="GeneID:100359678"
                     /db_xref="RGD:2325053"
                     /translation="MGRVQDVGWATAGLVIWAGTCYCIYRLTKGRTQSVSGLARNGSR
                     IETETMVGEQNQTLATSEAMAGREAETRIKTEPESGEGGEPVAEVDFKVPVLVRPSDN
                     CQAKTMLEEEIETQSETSSLVETVVMAEAVTLTESTSQAKEVTMKEAVTQTDAEAEAV
                     GKKEAVTQTKAKAWAMAGRAEVKKEAMTQTKAEAHTLDEKETEINRVTVTQSEVLAVT
                     KEVVKIGSMNETGIVAEATMRSLEETLAVPRTQSEARLDATVATKENPNDLSVVVAGV
                     DMKSYAQSQAVTIVKNDDMAGAETDNQEDLKNMSKAGSGVDMKASGQPHTAASILAEA
                     VPGAKNDAWDNANDICEAETDIRTCIIQPETVAKIEAEATSGAMMDGGEAASVKAMTD
                     ADVTDTQPQTVTSDQTEAMPDAKVKGKGNASALAKAGAKANTKTNLQTDALSDPGDKN
                     RSDNNVMAKAETGIDMVSPTQTEPVANVQGDDLPDGKIKAKDNANTTSKEGAQATAQS
                     QGEALPNTKGKARGKAKAKCKAAAGTDTKTCAQPQAGTKAEALSDSKVDSKSDSNAVS
                     KAGAKADQKACGQPQPVVNCQNEVLPGTKNKVKGNPNPMPKTEAGTAPTSSAQTNVVS
                     SSQGETTPGAKNKAKGNRNSVPKAGAGPDTTGSAQSQTVASSHSEALPGAKNKVKSNP
                     NVPKAEAGVGACPQSVAASQGIALTGTKTKVKGNSNAVSKQDTGAGTMGSVHAKAVAN
                     SQGETLPGSKNKVKGNSNAVPKAEAGAGTTDCIQPQAEALLGARNKARGNSSSVPKAE
                     SGASTILALASSQAEALLGARNKVRGSSNATPKAEAGVGSRGCAQSQAVVSSQNETLL
                     GARNKIRSNAGTKSGARTGTRSSAQPQAVVSSQNETLLGARDKGLSSSQVEATADNRI
                     YAKPMVAAVPTSEMVTVAGTQPNIHDYYWNGIGVEDWIAAERWIKFRFQTIDGDWENS
                     VSWTEDDSGASIGPWSGANDKAGVVSSWAVACDETSIKSWTGARTDNEVALGSWVGAG
                     DQASGALWAGAQTSEGTWVGDKATAASWTGAENQITAGSWVVSGNQAIAGPWAVSQVS
                     DGSWPTVQASGVSWVVDQATGTWTVAENQTGAVSWAGAGNIVSIGYWTGAVDQTNAVS
                     WTGTSDQVGGEAKPRFEDQASEKGSWTVVQTSGESRLGSEDQSSGRSWTEAVDQTSAA
                     SRLGTVDPAAGTSWVGTGDQTVGGSTSGSAEQSGSGSWAGTRNLAGERSWTGTGDQPD
                     GATKPSFENQTSDEGSWTGTIGQPSGGSKSVSEDQSAARSWTDSGDQLSGGFLVGPLD
                     QASSESQPVSGEMAASGVDQSSGGGCWTGSGDQSGGESRLGPRDQSNGESWPGTGDQT
                     SGWYCTYTGTQTIGGGSWVGPGAQDVGGSKPVHMNQTSGGAWLGTGTQVSAVSWTGDQ
                     VGGCPKPGFEDQTIGGGFWAGAGDQTTGGSRPAVSEDQSSAGVSWGGTGAHVIGGSTD
                     QSSGGSWPGMGNQVSGGSWIGPVDQTSGCTKSGFEDQSCGGGSWAGAGDQTSGESWPG
                     SRASNEASGGSRLDSQDQAGGGSWIRSEDQASGRFLVSAEVEANEGFWFGPGSEAFIG
                     SWCWTEEATILPVAEMKEEASTESTSGTREETIVSSGVGDEKKTSTESWTRSEETAFT
                     GTCAGSETDTVAGAQAEVEPESKARPEAEAEAEAEAEAEAEAEAEAEAEISVEAEVRV
                     GTRADAGAAVATDSEARAETGARVEAGAAAEAGMGFWPWNGDGTTKGSRLGAEAEAGV
                     GGGAEAETETENSMGFWFWNGDAATDESKLGTEAKAEAEIGTGTGTEPETGTGVGGGA
                     EAVAETSMGFWFWDGDGGTKGSRLGTEAEAGVGAGAQAGAEAVAETSMEFWSWDGDQA
                     TKGSRLGAEAEPGAGVVAEAGAETSMGFWFWNQDSTTKGSGLGAEAGNGLGSWTLSTN
                     VNDDEDEEEDELSRESSPGIEEISLRTLFGAESEDSNDLRSTNEKDVNSESGTGDKAD
                     DSKGQFDAANGVDIRSWFYTGNESRCQNESSSQVKAKKSMESRGIYPSMVPGAGMGVW
                     DGAIVCSESKLLHKTSFPGEDGFRRQVNPGVKVHSCNCRCKRTVNLDPHDLEKLICMI
                     EMTEDPSVHEIATNALYNSADYPYPQEIDRNIGGISVIQSLLNNPYPNVRQKALNALN
                     NLSVAAENHRKVKTYLSQVCEDTVTYPLNSNVQVAGLRLIRHLTITSEYQHMVTNYIS
                     EFLRLLALGSGETKDHVLGMLVNFSKNPSMTRDLLIANAPTALINIFSKKETKENILN
                     ALLLFENINHHFKKRGKTYPQDRFSKTSLYFLFQRPKACAKKLRALAADCSDPEVKEK
                     VEVLINKL"
ORIGIN      
        1 tttgcgcacg gacgcgagga gggggttgcc tgtgcgtaca gaagggggtc ctgttgactg
       61 ccttccgacc agtggggggg ttgtgaggag gagggcgagc gatgacgcgg ggccctcacg
      121 tgacccggag ctgcagagcg acgcagcctt gggtgcagtc gtcactctcg tctggccacc
      181 aactccccgc tgccctgcgc gcggcgggct ggcatcgggc ccggggcgag cagagcagtt
      241 cggtgtggct ctatttgtgg tgaggcgagg gaaaaacgga gacagagaca agagaactgc
      301 acaggatcta tggaggttag tggctccaca tgtttgaagt agggcttttt acccctgaaa
      361 gagggggaga ctgttttgga actgtggagg ttggtataaa gatccttctg catgtctgct
      421 tcagaggctg agattcatgg aagcaaggaa gaaaagagga aattatctct gaccaggata
      481 actggtctaa aggtctcatg actctatact ttagagtgcg tcaccaagca aaagaaggat
      541 agaagtggca acttcgttca ttccaggtct acttccaggg gcagctctgc tggcctttaa
      601 gtggttaagc accattgccc agacacacca tcctctttcc tagcccgagt gagccctcct
      661 atacattgtc cgtgccttca gcaggggtga ttacatgggc cgtgttcagg atgtgggctg
      721 ggccactgca ggactggtga tctgggctgg tacctgctac tgcatttaca gattaaccaa
      781 gggaagaact cagagtgtga gcggacttgc cagaaatggg tccagaatcg agacggagac
      841 tatggttggg gaacagaacc agaccttggc cacaagtgaa gccatggctg gaagagaggc
      901 tgagactaga atcaagactg aaccagaatc tggagaagga ggtgagcctg tggctgaagt
      961 agacttcaag gtccctgttc tagttagacc cagtgacaat tgtcaggcca agacaatgct
     1021 tgaggaagag atagagaccc agtctgagac cagttcattg gtggaaactg tggtcatggc
     1081 agaggcagtg actttgactg aatccacatc ccaagccaag gaagtaacca tgaaagaggc
     1141 ggttacacaa actgatgccg aggctgaggc agtaggcaag aaagaggcag tgactcagac
     1201 caaagctaaa gcttgggcaa tggctggcag ggcagaggtc aagaaagaag cgatgaccca
     1261 gaccaaagca gaagctcata cattggatga aaaagagaca gagattaaca gagtgacagt
     1321 gacacagagt gaggtcttgg cagtgaccaa ggaagtagtc aagatcggaa gcatgaatga
     1381 gactggaatt gtggctgaag ccacgatgag gtccctggaa gagactctgg ctgtgcctag
     1441 gactcagtct gaggctaggc ttgatgccac agttgctact aaggagaatc ctaatgattt
     1501 gtctgttgta gtggctggag tggacatgaa gtcctatgca cagtctcagg ctgtgaccat
     1561 agtcaaaaat gatgatatgg ctggtgccga gactgacaac caggaggatc tcaaaaacat
     1621 gtctaaggca gggtctgggg tagatatgaa ggcttctggt cagcctcata ctgctgccag
     1681 cattctggct gaagctgtgc caggggcaaa gaatgatgct tgggacaatg caaatgacat
     1741 ttgtgaagca gagacagata taagaacttg tataatacaa cctgagactg tggccaagat
     1801 agaggctgag gcaacgtctg gtgccatgat ggacggtggg gaagctgcca gtgttaaggc
     1861 aatgactgat gctgacgtaa cagatactca gcctcaaact gtaaccagtg atcagactga
     1921 agccatgcct gatgccaagg ttaagggtaa aggtaatgcc agtgcactgg ctaaagcagg
     1981 ggccaaggca aacaccaaaa ccaatttgca gactgatgcc ttgtctgatc ccggggataa
     2041 aaaccgaagt gataacaatg tcatggctaa ggcagagact ggtatagaca tggtttcccc
     2101 tacccaaact gagcctgtgg ccaatgtcca gggtgatgac ttgccagatg gcaaaatcaa
     2161 ggctaaggac aatgccaata ccacatctaa ggaaggagct caggctacgg cccagagcca
     2221 gggtgaagcc ttacctaata ctaaaggtaa ggctagaggt aaagccaaag ccaagtgtaa
     2281 ggcagcggct gggacggaca cgaaaacgtg tgcacagcct caggctggga ccaaagctga
     2341 ggccttgtct gattccaagg ttgatagcaa aagtgactct aatgctgttt ctaaagcagg
     2401 ggcaaaggca gaccagaaag cctgtggtca gccacagcct gtggtcaatt gccagaatga
     2461 ggtcttgcct ggtactaaga ataaggtcaa gggcaatccg aatcctatgc ctaagacaga
     2521 ggctgggaca gctccaacaa gctctgccca gactaatgtt gtgagcagtt cccaaggtga
     2581 gaccacccct ggagccaaga ataaggccaa gggtaatcgg aattctgtgc ctaaagcagg
     2641 ggctgggcca gatacaacgg gttctgccca gtcccagact gtagccagtt cccacagtga
     2701 ggccttacct ggtgccaaga ataaagttaa gagcaatccc aatgtgccta aggcagaggc
     2761 tggggtcggt gcctgtcccc agtctgtggc tgcttcccag ggtattgcct tgactggtac
     2821 caagactaag gtcaagggca attctaatgc tgtgtctaaa caagatactg gggcaggtac
     2881 aatgggctct gtccatgcca aggctgtggc aaattcccag ggtgagacct tacctggttc
     2941 caagaataag gtcaagggta attccaatgc tgtgcctaag gcagaagctg gggcaggtac
     3001 aacagactgt attcagcccc aggctgaggc cttgcttggt gccagaaata aggctagggg
     3061 taattccagt tctgtgccta aggcagagtc tggggcgagt acaatactgg ctttggcttc
     3121 ttcccaggct gaggccttgc ttggtgccag aaataaggtc aggggtagtt ccaatgctac
     3181 acctaaggca gaggctgggg taggttcaag gggctgtgcc cagtcccagg ctgtggtcag
     3241 ttcacagaat gaaaccttgc ttggtgccag gaataagatt aggtccaatg ctggtactaa
     3301 atcaggagca agaacaggta caaggagctc tgctcagccc caggctgtag tcagttctca
     3361 gaatgaaact ttgcttgggg caagggataa aggtctgtcc agctcgcagg tagaagccac
     3421 tgcagacaat aggatctacg caaagcccat ggtagcggct gtgcccactt ctgaaatggt
     3481 gactgtggca ggtacccagc ctaacattca tgattactac tggaatggga ttggtgttga
     3541 ggattggatt gctgctgagc ggtggatcaa atttaggttt cagactatag atggagactg
     3601 ggagaatagt gtatcctgga ctgaggatga cagtggagcc agtattgggc cctggagtgg
     3661 ggctaatgac aaggctggcg ttgttagctc ctgggctgtg gcttgtgatg aaactagcat
     3721 taagtcctgg actggggcta ggacggacaa tgaggttgct cttgggtcct gggtaggtgc
     3781 tggtgaccag gccagtggag cactctgggc aggagctcag acgagtgagg ggacctgggt
     3841 tggagacaaa gccactgcag cttcctggac tggggctgag aaccagatca ctgcaggttc
     3901 ttgggttgtc tctggaaacc aggccattgc tgggccctgg gctgtgagtc aggttagtga
     3961 tgggtcgtgg cctacagtcc aggccagtgg agtgtcctgg gttgtggacc aggctactgg
     4021 gacctggact gtggctgaga accagactgg tgcagtgtct tgggctggag ctggcaatat
     4081 agttagtatt ggatactgga ctggggctgt agaccagacc aatgcagtgt cctggacagg
     4141 gactagtgat caggttggtg gtgaggctaa gccaaggttt gaagatcagg ccagtgaaaa
     4201 ggggtcttgg actgtagttc agactagtgg agagtccagg ttgggatctg aggatcagtc
     4261 cagtggaagg tcttggactg aggctgtaga ccaaaccagt gcagcatcca ggcttggaac
     4321 tgtagatcca gctgctggta catcctgggt tggaactggg gaccagactg ttggaggatc
     4381 tacatcaggg tctgcagagc agtctggtag tggctcatgg gctggcacta ggaatctggc
     4441 tggggaaaga tcttggactg ggactggtga tcagccagat ggtgcaacca aacctagttt
     4501 tgagaatcag actagtgatg aagggtcttg gactggcact attggccagc ctagtggagg
     4561 ttccaagtca gtgtctgagg accagtctgc tgcgagatcc tggacagatt ctggagacca
     4621 actcagtgga ggattcttgg ttgggccttt ggaccaggct agctcagagt ctcagcctgt
     4681 ctctggagaa atggctgcta gtggagtaga tcagtctagt ggaggaggat gctggactgg
     4741 atctggggac cagtctggcg gagaatctag gctgggtccc agggaccaat cgaatggaga
     4801 gtcttggcct ggcactggag atcagaccag tggatggtac tgtacttaca ctgggactca
     4861 gactattgga ggtggctctt gggttgggcc cggggctcag gatgttggag ggtcaaagcc
     4921 agtgcacatg aaccagacta gtggtggggc ctggcttggc actgggactc aggtcagtgc
     4981 agtgtcctgg actggtgatc aagttggtgg ctgtcccaaa cctggatttg aggatcagac
     5041 cattggagga ggattctggg ctggtgctgg ggaccagacc actggaggat ccaggccagc
     5101 tgtgtctgag gatcagtcta gtgcaggagt ttcctggggt ggcactggtg ctcatgttat
     5161 tggagggtcc actgatcagt ccagtggtgg gtcctggcct ggtatgggga atcaggtcag
     5221 tggagggtct tggattgggc ctgtggatca gactagtggc tgtactaaat ctggatttga
     5281 agatcagtca tgtggaggag gctcctgggc tggcgctggg gaccagacta gtggagaatc
     5341 ctggcctggg tctagggcta gtaatgaagc cagtggagga tctaggctag attctcaaga
     5401 ccaggccggt ggagggtcct ggattaggtc tgaggatcag gccagtggaa gattccttgt
     5461 cagtgctgag gtggaggcta atgaaggatt ttggtttggg cctgggagtg aggcctttat
     5521 agggtcttgg tgctggacag aagaggctac tattttgcct gtagctgaga tgaaagagga
     5581 ggccagtact gaatccacat cagggactag ggaagaaacc atcgttagtt ctggcgtagg
     5641 ggatgaaaag aagaccagta ctgaatcctg gaccagatct gaagagacag catttacagg
     5701 cacctgtgct gggagtgaga ctgacactgt ggctggagct caggctgaag ttgagcctga
     5761 atcaaaggct agacctgagg ctgaggctga ggctgaggct gaggctgagg ctgaggctga
     5821 ggctgaggct gaggctgagg ctgagatttc ggttgaggct gaggtgcgag tggggacgag
     5881 ggctgatgct ggggcagcag ttgcaactga ttctgaagcc agagctgaga caggggctag
     5941 agttgaggca ggggctgcag ctgaagctgg aatggggttt tggccctgga atggagatgg
     6001 caccactaaa gggtctaggc ttggagcgga ggctgaggct ggagttgggg gaggagcaga
     6061 ggctgaaact gagactgaga atagcatggg attttggttc tggaatggag atgcagctac
     6121 tgacgagtct aagcttggta cagaggctaa agctgaggct gaaattggaa cagggacagg
     6181 gacagagcca gagacaggga caggagtggg tgggggggca gaggctgtgg ctgagaccag
     6241 catgggattt tggttctggg atggagatgg aggcactaaa gggtctaggc ttgggactga
     6301 ggctgaggct ggagttgggg caggagctca ggctggggct gaagctgtgg ctgagactag
     6361 catggaattt tggtcctggg atggtgatca agctactaaa gggtctaggc ttggggctga
     6421 ggctgagcct ggggctggag ttgtggctga ggctggggct gagaccagta tggggttttg
     6481 gttttggaat caagactcaa ccactaaagg gtctgggctt ggggctgagg ctgggaatgg
     6541 cttagggtct tggactttat ctacaaatgt aaacgatgat gaagatgagg aggaggatga
     6601 actaagtaga gaatccagcc ctggtattga agagatcagt ctaagaaccc tattcggggc
     6661 cgagagtgag gacagtaatg accttagatc tacaaatgaa aaagatgtta attctgaatc
     6721 tgggactggg gataaggctg acgactctaa agggcagttt gatgctgcta atggagttga
     6781 cataaggtcc tggttctata ctggtaatga aagcagatgt caaaatgagt cttcatctca
     6841 ggtgaaagcc aaaaagtcaa tggaatcaag gggtatatat ccatccatgg tccctggggc
     6901 aggaatgggt gtatgggatg gagccattgt ttgttcggaa agcaagttat tacacaaaac
     6961 cagctttcca ggagaagatg gcttcagaag gcaagtcaat cctggagtca aggtgcactc
     7021 ctgcaactgc cgctgtaaac gtactgtcaa tctggatcca cacgatcttg aaaaactcat
     7081 ctgcatgatc gaaatgactg aagatccttc tgttcacgaa atagccacta atgctctgta
     7141 taacagtgct gattatcctt atccccagga aattgatcgg aatataggtg gaatttcagt
     7201 tatccaaagc ttattgaaca atccctatcc caatgtccgg caaaaggctt taaatgcact
     7261 gaataacctc tcagttgctg ctgaaaacca tagaaaggtt aagacatatt taagtcaagt
     7321 atgtgaagat actgtcacct atcccttgaa ttcaaatgtg caagtggctg gactcagatt
     7381 gataaggcac ctgactatta ctagtgagta tcagcatatg gttaccaatt atatttcaga
     7441 gtttctccgt ttgttggctc tgggaagcgg agaaactaaa gaccatgttt taggaatgct
     7501 tgtgaatttc tctaaaaatc catccatgac aagagacctg ctaattgcca acgcaccaac
     7561 agcactgatc aacattttta gcaagaaaga gacgaaagaa aatatcctta atgctctttt
     7621 actttttgaa aatataaacc atcattttaa gaaaagaggg aaaacatatc cccaagaccg
     7681 cttcagtaaa acctcccttt atttcctgtt tcaacgacct aaagcctgtg ccaagaaact
     7741 tagagcctta gcagcagatt gtagtgaccc agaggtgaaa gaaaaagttg aggtattgat
     7801 aaataaactc tgactgtcta tctgtttccc ccaaagtatg agtaatgttt tggttttacc
     7861 tcctggacat gatgcacatt gtaccttgca ttagaacttt gaaactgatg ttgcctacga
     7921 ggatctagag ctggacagtt tgatgaacac caaatgagtt cccgcttgtg ctgaaaatac
     7981 atgtgtcaat ttttatcttg tctggattga gatattttta gtatgcttca tgagcaaaag
     8041 ccaaccgatt cttcataagt aaggtaatct ttggtccttt gtgtggactt atgtttatac
     8101 atttgagact ttatttttgt gtcatcaata aacttgtgtg ttttaagaag cggaagaa
//
