LOCUS       NM_001024367            2157 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus armadillo repeat containing, X-linked 1 (Armcx1),
            mRNA.
ACCESSION   NM_001024367 XM_577018
VERSION     NM_001024367.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   3  (bases 1 to 2157)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085780.1.
            
            On May 27, 2005 this sequence version replaced XM_577018.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085780.1, CK480596.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq32"
     gene            1..2157
                     /gene="Armcx1"
                     /note="armadillo repeat containing, X-linked 1"
                     /db_xref="GeneID:501619"
                     /db_xref="RGD:1561629"
     exon            1..41
                     /gene="Armcx1"
                     /inference="alignment:Splign:2.1.0"
     exon            42..122
                     /gene="Armcx1"
                     /inference="alignment:Splign:2.1.0"
     exon            123..222
                     /gene="Armcx1"
                     /inference="alignment:Splign:2.1.0"
     exon            223..2127
                     /gene="Armcx1"
                     /inference="alignment:Splign:2.1.0"
     CDS             351..1736
                     /gene="Armcx1"
                     /codon_start=1
                     /product="armadillo repeat-containing X-linked protein 1"
                     /protein_id="NP_001019538.1"
                     /db_xref="GeneID:501619"
                     /db_xref="RGD:1561629"
                     /translation="MGRTREAGCVAAGMVIGAGACYCVYRLTWGKDENEKLWDDEDEE
                     EEEEEESCSGKPEIGGKTVKERKTHVGVGAGAKPQDDSKSKAEANVGPENGPDVKKEV
                     YPESHSEGGLEAKAKALFKSLKEQASAKAGRGIRFPNISRIRTLTSSLPCPGGRGGGC
                     HPGRTGSRARNRTSGKVKRKNRSKSNKAPATAWPVRRGKFSFPYKIDDILSAPDLQKV
                     LNILERTNDPFTQEVALVTLGNNAAYSFNQNAIRELGGVPIIAKLIKTRDPIIREKTY
                     NALNNLSVNSENQGKIKTYISQVCDDTMVCRLDSAVQMAGLRLLTNMTVTNHYQHLLS
                     YSFPDFFALLFLGNHFTKIQTMKLIINFTENPAMTRELVSCKVPSELISLFNKEWDRE
                     ILLNILTLFENINDNIKSEGLASSRKEFSRSSLFFLFKESGVCVKKIKALASHKDLVV
                     KVKVLKVLTKL"
ORIGIN      
        1 gccgagagca ggcaggcctg ctgcggaagg aggaggagaa ggtgcctgta tctgtggatc
       61 tcgctcccga agtccagtca aaacggagaa gcagggaagg gaggaaaagt ttccagaatc
      121 aaatctgcaa gaagctggaa aggaggaagg gactacttgg atctctgagg gtgtatgtga
      181 ccgtgtccct gtgaacctga ctcaggacat ctgcatacaa gcgtatcact gtatctgctg
      241 ttgtagctgc ccctaacctg cagaatctga agactttgct cctgatctgg gaatattctg
      301 gatcggaaca aaccagcttt gtgtctaggt taagggaccc cagctgtacc atgggtcgca
      361 cccgggaagc tggatgtgtg gctgcgggca tggtcattgg ggctggtgcc tgctactgtg
      421 tgtacagact gacctgggga aaagatgaga atgagaagtt gtgggatgat gaagatgagg
      481 aagaggaaga agaggaagag tcttgtagtg gcaaaccaga aattgggggc aaaactgtaa
      541 aagaacgtaa gactcatgtt ggagtaggtg cgggagccaa acctcaagat gactcaaagt
      601 ccaaggctga ggcgaatgtg ggacctgaga atggtccaga tgtaaagaag gaagtgtacc
      661 cagaatccca tagtgagggt ggcctagaag ctaaggccaa agcccttttc aagtccctaa
      721 aggaacaggc aagtgcaaag gcaggcagag gcataaggtt tcctaacatc tctaggatta
      781 ggaccctgac atcaagtttg ccctgcccag gaggcagagg tggaggctgc cacccaggaa
      841 ggactggctc tagggctagg aataggacaa gtgggaaagt caagagaaag aaccgaagca
      901 agagtaacaa ggctccagcc acagcatggc ctgttcgcag gggcaagttc agctttccct
      961 ataaaattga tgatattttg agtgcccctg atcttcaaaa ggtccttaac atcttggaga
     1021 gaacaaatga ccctttcact caggaagtag cactggtcac attgggtaac aatgcagcgt
     1081 attcatttaa tcaaaatgcc atccgtgaat tgggtggggt cccaattatc gcaaaactga
     1141 taaaaacaag agaccccatt attagagaaa agacttacaa tgctcttaat aacttgagtg
     1201 ttaattctga aaatcagggc aagattaaga cttatatcag tcaagtgtgt gacgatacca
     1261 tggtttgtcg attggactca gctgtccaga tggcgggact aagactcctt accaacatga
     1321 ctgtgactaa tcactaccaa catttgcttt cctattcttt cccagacttc tttgctttgt
     1381 tatttctggg aaatcacttc accaagatac aaactatgaa actaattata aactttactg
     1441 aaaacccagc catgacaaga gagctggtca gttgtaaggt accatcagaa ctgatttctc
     1501 tctttaataa agaatgggat agagagattc ttcttaacat tcttaccctc tttgaaaata
     1561 taaatgacaa cataaaaagt gaagggcttg catcatccag gaaagaattc agcagaagct
     1621 cactgttttt cttatttaaa gagtctggag tatgtgttaa gaaaatcaaa gcattagcaa
     1681 gtcataagga tctggtggtc aaagtgaaag ttctgaaagt cttaaccaaa ttataatctg
     1741 agatctgttc caagcaacac tgatgtgacg tttcttaagt ttgcacgtgg gaacaatgca
     1801 ttttgtaaat ccttaggttt tcattgttct tgtgtagcaa agggatcctt tgaactgcga
     1861 tttagggata atgaatatca taaatagtca atagccatcg atgctggctt tagactgagc
     1921 cactctcagt atgccaaata tatattagag cttgcacaaa gaaagcattt attaattcaa
     1981 cttgctatct aggttgagat atttttattg tttaactaag ctgacagtga agcaactata
     2041 tgtcataaat aagctatact tttgtattga tttaaattta ttcatctaag agttgtgctt
     2101 tatcaataaa gttatgttta agcagaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//
