LOCUS       NM_001107306            1438 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus armadillo repeat containing 6 (Armc6), mRNA.
ACCESSION   NM_001107306 XM_001071122 XM_224735
VERSION     NM_001107306.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1438)
  AUTHORS   Nagamachi A, Matsui H, Asou H, Ozaki Y, Aki D, Kanai A, Takubo K,
            Suda T, Nakamura T, Wolff L, Honda H and Inaba T.
  TITLE     Haploinsufficiency of SAMD9L, an endosome fusion facilitator,
            causes myeloid malignancies in mice mimicking human diseases with
            monosomy 7
  JOURNAL   Cancer Cell 24 (3), 305-317 (2013)
   PUBMED   24029230
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474031.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001071122.1, XM_224735.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ137162.1, DY316878.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1438
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..1438
                     /gene="Armc6"
                     /gene_synonym="RGD1306691"
                     /note="armadillo repeat containing 6"
                     /db_xref="GeneID:306352"
                     /db_xref="RGD:1306691"
     exon            1..362
                     /gene="Armc6"
                     /gene_synonym="RGD1306691"
                     /inference="alignment:Splign:2.1.0"
     exon            363..489
                     /gene="Armc6"
                     /gene_synonym="RGD1306691"
                     /inference="alignment:Splign:2.1.0"
     CDS             369..1193
                     /gene="Armc6"
                     /gene_synonym="RGD1306691"
                     /codon_start=1
                     /product="armadillo repeat-containing protein 6"
                     /protein_id="NP_001100776.1"
                     /db_xref="GeneID:306352"
                     /db_xref="RGD:1306691"
                     /translation="MASKRITQETFDAAVRENIEEFEMGAEEAIREAVEQFESQGVDL
                     SNIVKTVPKVSLDGLQEPTHDVLQALNDLQQALTGSQLQEVSAHLVRFCDQCKQQKAS
                     RYLAAQKGAYPILLAAWQLAATSDQGLLLQALNALAVLTDGQPDLLDTQGLHLLVATL
                     ARNAANTELTCCGIRCVRHVCLKHEQNRQGLVKAGVLPLLTAAITQHGQHADVVREAC
                     WALRVMTFDDDIRVPFGHAHEHAKMIVQENRGLKVLIEAARGRSSTGKRRVGLLLS"
     exon            490..572
                     /gene="Armc6"
                     /gene_synonym="RGD1306691"
                     /inference="alignment:Splign:2.1.0"
     exon            573..1438
                     /gene="Armc6"
                     /gene_synonym="RGD1306691"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tacgcaagcg tcgaaagtag ccatgttggc tctttcacgc aggcgcgttg ctgaattctc
       61 agggcagatt atacctaggt gaaaactatc tcttttaagg ggaagcgaca cctagaagga
      121 gcattgagaa gactgcaagg gtttcaggcc cacacgtact ctgtgtctcc ctttgcttta
      181 cctgtgcttg cggtcgccct cgttgccccg ggaaggagcc tttcagctga aggagggacg
      241 ccgagccgag gcgacgcctc tgcgcttgcg cgtgtacagt ggccggaagg agccaaagta
      301 aagtcaagtc tccggtgaca gctgcgagcc ccaccctttc cccacgtggc tgcgtagacc
      361 tggcagccat ggcttccaag cgcatcaccc aggaaacctt tgatgctgca gtgagggaga
      421 acattgagga gtttgagatg ggcgctgagg aggccattcg agaggctgtg gagcagtttg
      481 aatcgcaagg ggttgatctg agcaacattg tgaagacagt accgaaagta tccttggatg
      541 gcctccagga gcccacacat gatgtcctac aggctctcaa tgatctgcag caggccctga
      601 ctggctctca gctccaggag gtgtctgccc atcttgtccg tttctgtgac cagtgcaagc
      661 agcagaaagc cagccgctac ctggcagccc agaagggggc ctacccaatc ctcctggctg
      721 cttggcagct ggctgccact agcgaccagg gtcttctgct ccaggctctc aatgccctgg
      781 cagtgctgac tgatggccaa cctgacctcc tggatactca gggcttgcat cttctcgtgg
      841 ccacgctggc acggaatgct gccaacactg aactcacatg ctgtgggatt cgctgtgtgc
      901 gccatgtctg cctaaagcat gaacagaatc ggcagggctt ggtgaaagcc ggtgtgctgc
      961 ccctgctcac ggctgctatt acacagcatg gtcaacacgc cgatgtggtc agggaggcct
     1021 gctgggcctt gcgggtcatg accttcgatg atgatatcag agtgcccttt ggccatgccc
     1081 acgagcatgc caagatgatt gttcaggaga acagaggcct gaaggtgctc attgaggctg
     1141 ccagaggtag gagcagcact ggtaagagga gggtaggcct gcttctcagc tagaagaatg
     1201 agctcccagc ctgccctgtg gttccacctc catagggggc ctgtgcatgg gatctccact
     1261 cctctgggag atgggaaaac ctttctcagt ccctgttctg taccccaaca gtggctgagg
     1321 aatgaggccc gcctgaccat ctgtaaagcc ggccagcttc ttaattgttt gcacttctgt
     1381 gcttgtttat ggcagcttga aattggctaa ttaggggtag agcaggagtg caaacttc
//
