LOCUS       NM_001106576            1944 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus armadillo repeat containing 10 (Armc10), mRNA.
ACCESSION   NM_001106576 XM_001060587 XM_001060650 XM_231295
VERSION     NM_001106576.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1944)
  AUTHORS   Zhou,X., Yang,G., Huang,R., Chen,X. and Hu,G.
  TITLE     SVH-B interacts directly with p53 and suppresses the
            transcriptional activity of p53
  JOURNAL   FEBS Lett 581 (25), 4943-4948 (2007)
   PUBMED   17904127
REFERENCE   2  (bases 1 to 1944)
  AUTHORS   Huang,R., Xing,Z., Luan,Z., Wu,T., Wu,X. and Hu,G.
  TITLE     A specific splicing variant of SVH, a novel human armadillo repeat
            protein, is up-regulated in hepatocellular carcinomas
  JOURNAL   Cancer Res 63 (13), 3775-3782 (2003)
   PUBMED   12839973
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DY320753.1, BC079464.1 and CN541016.1.
            
            On Nov 29, 2007 this sequence version replaced NM_001106576.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161913.1, CK476007.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-96                DY320753.1         1-96
            97-1838             BC079464.1         1-1742
            1839-1944           CN541016.1         1-106               c
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q11"
     gene            1..1944
                     /gene="Armc10"
                     /gene_synonym="2810037c14rik; RGD1305915"
                     /note="armadillo repeat containing 10"
                     /db_xref="GeneID:296758"
                     /db_xref="RGD:1305915"
     exon            1..276
                     /gene="Armc10"
                     /gene_synonym="2810037c14rik; RGD1305915"
                     /inference="alignment:Splign:2.1.0"
     CDS             144..1064
                     /gene="Armc10"
                     /gene_synonym="2810037c14rik; RGD1305915"
                     /note="SVH protein"
                     /codon_start=1
                     /product="armadillo repeat-containing protein 10"
                     /protein_id="NP_001100046.2"
                     /db_xref="GeneID:296758"
                     /db_xref="RGD:1305915"
                     /translation="MGGARDVGWVAAGLVLGAGACYCIYRLTRGPRRGGRRLRPSRSA
                     EDLTEGSYDAILSAEQLEKLLYLLESTDDPIITEKALVTLGNNAAFSTNQAIIRELGG
                     IPIVGSKINSLNQSIKEKALNALNNLSVNVENQTKIKIYVRQVCEDVFADPLNSAVQL
                     AALRLLTNMTVTNDYQHLLSNYITGLLHLLLIGNGSTKVQVLKLLLNLSENPAMTEGL
                     LSAQVDSSFLSLYDGQMANEILLRALTLFQNINNCLRVEGRLANQLPFAKGSLFFLLY
                     GEECAQKMKALACHPDVDVKEKALAIKPKF"
     exon            277..425
                     /gene="Armc10"
                     /gene_synonym="2810037c14rik; RGD1305915"
                     /inference="alignment:Splign:2.1.0"
     exon            426..560
                     /gene="Armc10"
                     /gene_synonym="2810037c14rik; RGD1305915"
                     /inference="alignment:Splign:2.1.0"
     exon            561..737
                     /gene="Armc10"
                     /gene_synonym="2810037c14rik; RGD1305915"
                     /inference="alignment:Splign:2.1.0"
     exon            738..809
                     /gene="Armc10"
                     /gene_synonym="2810037c14rik; RGD1305915"
                     /inference="alignment:Splign:2.1.0"
     exon            810..1926
                     /gene="Armc10"
                     /gene_synonym="2810037c14rik; RGD1305915"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtgggaggg cttccgacct cagcagggcg gcttccggaa ggcggagctc caaccccatt
       61 tcctttctct gggctggttc tggcccagct gcacctgcgt gtggccctgg caccccggct
      121 ccctgcagct cggtggcagc agtatgggcg gcgcgcggga cgtgggctgg gtggcagccg
      181 ggctagtcct gggcgctggc gcctgctact gtatctaccg gctgactcgg ggaccgcggc
      241 gaggcgggcg ccgactgcgc ccttcgcggt ccgcagaaga cctaacggag ggctcctacg
      301 atgctatctt aagtgcggag cagcttgaga aacttctgta cctgctggag tcaaccgacg
      361 accccataat tactgagaaa gccctggtca ccttgggaaa taatgcagcc ttttccacta
      421 accaagccat cattcgtgag ttgggtggta taccaattgt cggaagcaaa atcaactccc
      481 tgaaccaaag tattaaagag aaagctttaa atgcattaaa taacctgagt gtgaacgttg
      541 aaaatcaaac taagataaag atatacgtcc gtcaagtctg tgaggacgtc tttgctgatc
      601 ccctgaactc tgcggtgcag ctggctgcac tgaggctgct gacaaacatg acggtcacca
      661 atgactacca gcacctgctc agcaactaca tcaccggcct gctccacctg ctacttatcg
      721 gaaacggaag caccaaggtt caggttttga agctgctttt gaatttgtct gagaatccag
      781 ccatgacaga aggactactg agtgcccaag tggactcttc attcctttcc ctgtacgatg
      841 gccaaatggc aaacgagatt cttcttcggg ctcttacgct gtttcagaat ataaacaact
      901 gcctcagagt ggaaggccgg ttagctaatc agcttccttt tgctaaaggg tcattgtttt
      961 tcctgttgta tggagaagag tgtgcccaga aaatgaaggc attagcttgt caccctgatg
     1021 tggatgtgaa agagaaggct ttagcaataa agccgaaatt ctgatgggtt gctcctgttt
     1081 ttatcaaaga gtcagagagt gatgtggaat taagtcaaca cacgggaact tagaccgtcc
     1141 tttaaaagga ttctttcagc tgatgtgagt taaaccataa aagtgggtgt gagcagctct
     1201 aatccaacat gatgttcaaa ctgttaggtt tgggagtggt tcagatttgg ggtttgggga
     1261 ttgaatagtc tggaaccttc agaggatgtg aaccacttct gaggcaagcg tcgagttatg
     1321 atggtggatg gattgccacg ctctaaggga ttactttgaa ggcttctact gctattcaat
     1381 gaagatgagg ggctgtgctg aagagactca ctgaggtatt taatcgtatt cctgacatga
     1441 agtgagtggc cttcctccac agtcctaact cctgggagtg atttgcggtt gctcagtgta
     1501 aggtgctgat tgaagacaga agtgccacag ccagggctgt gtgcctcaaa gcagtgagtc
     1561 cggcaagctc gaggccaccc gccaccccca ccgctctgct tgcaagtccg agttcaccat
     1621 agactctgcc ggcatcattt ctgatcagtg agactgaact tcctccaccg gtgcacagag
     1681 cgtttctaga atgatccgta tgtacaactc ctgggcgcgg gactgggacg tgggtacgtg
     1741 gattcctttg tgtgcctatt tctactgttt ggatttttac tgagcataaa ctgtataatt
     1801 tttttttaat aaaaaggaaa atggcaaggt ggacataatc tcttcccctc atggacgtga
     1861 ttttaccaaa tttcatcaca ttttacttga ctaaaactac aatacatgaa atgtgttgac
     1921 ttttttaaaa aaaaaaaaaa aaaa
//
