LOCUS       NM_001109071            1707 bp    mRNA    linear   ROD 12-NOV-2024
DEFINITION  Rattus norvegicus ARF like GTPase 8A (Arl8a), mRNA.
ACCESSION   NM_001109071 XM_001062708 XM_573456
VERSION     NM_001109071.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Vukoja,A., Rey,U., Petzoldt,A.G., Ott,C., Vollweiter,D.,
            Quentin,C., Puchkov,D., Reynolds,E., Lehmann,M., Hohensee,S.,
            Rosa,S., Lipowsky,R., Sigrist,S.J. and Haucke,V.
  TITLE     Presynaptic Biogenesis Requires Axonal Transport of
            Lysosome-Related Vesicles
  JOURNAL   Neuron 99 (6), 1216-1232 (2018)
   PUBMED   30174114
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   3  (bases 1 to 1707)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   4  (bases 1 to 1707)
  AUTHORS   Schroder,B., Wrocklage,C., Pan,C., Jager,R., Kosters,B.,
            Schafer,H., Elsasser,H.P., Mann,M. and Hasilik,A.
  TITLE     Integral and associated lysosomal membrane proteins
  JOURNAL   Traffic 8 (12), 1676-1686 (2007)
   PUBMED   17897319
REFERENCE   5  (bases 1 to 1707)
  AUTHORS   Okai,T., Araki,Y., Tada,M., Tateno,T., Kontani,K. and Katada,T.
  TITLE     Novel small GTPase subfamily capable of associating with tubulin is
            required for chromosome segregation
  JOURNAL   J Cell Sci 117 (Pt 20), 4705-4715 (2004)
   PUBMED   15331635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473958.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001062708.1, XM_573456.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK481291.1, BF287100.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q13"
     gene            1..1707
                     /gene="Arl8a"
                     /gene_synonym="RGD1565940"
                     /note="ARF like GTPase 8A"
                     /db_xref="GeneID:498234"
                     /db_xref="RGD:1565940"
     exon            1..281
                     /gene="Arl8a"
                     /gene_synonym="RGD1565940"
                     /inference="alignment:Splign:2.1.0"
     CDS             159..719
                     /gene="Arl8a"
                     /gene_synonym="RGD1565940"
                     /note="ADP-ribosylation factor-like 8A; ADP-ribosylation
                     factor like GTPase 8A"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein 8A"
                     /protein_id="NP_001102541.1"
                     /db_xref="GeneID:498234"
                     /db_xref="RGD:1565940"
                     /translation="MIALFNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQ
                     FNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQE
                     KIEASKNELHNLLDKPQLQGIPVLVLGNKRDLAGALDEKELIEKMNLSAIQDREICCY
                     SISCKEKDNIDITLQWLIQHSKSRRS"
     exon            282..362
                     /gene="Arl8a"
                     /gene_synonym="RGD1565940"
                     /inference="alignment:Splign:2.1.0"
     exon            363..436
                     /gene="Arl8a"
                     /gene_synonym="RGD1565940"
                     /inference="alignment:Splign:2.1.0"
     exon            437..530
                     /gene="Arl8a"
                     /gene_synonym="RGD1565940"
                     /inference="alignment:Splign:2.1.0"
     exon            531..598
                     /gene="Arl8a"
                     /gene_synonym="RGD1565940"
                     /inference="alignment:Splign:2.1.0"
     exon            599..669
                     /gene="Arl8a"
                     /gene_synonym="RGD1565940"
                     /inference="alignment:Splign:2.1.0"
     exon            670..1707
                     /gene="Arl8a"
                     /gene_synonym="RGD1565940"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatccgcggg cagcgcgtcg tcggccgccg cgctctagcc tccgcccgca ccgagccgcg
       61 ggacccggcc gcaccgggga ggggccgctc cgggccgcag cgcgagggca gcgagggcgg
      121 cggggacccg gcaccgggcg cggccggcgg cagcgaccat gatcgctttg ttcaacaaac
      181 tgctggactg gttcaaggcc ctgttctgga aggaggaaat ggagctcacg ctggtggggc
      241 tgcagtactc cggcaagacc accttcgtca acgtgatcgc gtcaggacag ttcaatgagg
      301 acatgatccc caccgtgggc ttcaacatgc gcaaaatcac caaagggaat gtcaccatca
      361 agctctggga cattggggga cagccccgtt tccgaagcat gtgggagcgc tactgcagag
      421 gagtgagcgc catcgtgtat atggtggatg ctgcggacca ggagaagatc gaggcctcca
      481 agaatgagct ccacaacctg ctagacaagc cacagctgca aggcatcccg gtcttagtcc
      541 tcggtaacaa gcgagacctc gccggagcgc tagatgagaa ggagctaatc gagaaaatga
      601 atctgtccgc tatccaggac cgagagatct gctgctactc catctcctgc aaggagaagg
      661 acaacataga catcacccta cagtggctta ttcaacactc aaagtcacgg agaagctgag
      721 actgtggctc tcctaaccag ggaccacagt cacctaacct gaagccgagc tccccgccct
      781 gtttttctcc ccctaagccc actcctcctc acccagtgtg gggagggccc tctggggctc
      841 ctagagccct gttctgctga ggtttcaact cctgttttta ttgtaaaata attgccctct
      901 ccccaagtct ggtcccctaa cctctctctg tcccttcagt tacccgaccc actcccctcc
      961 ccgtcaacag ccctggcccc gcaaccccta tcctcactct ctgccccacc ctcctccctt
     1021 ttcaacactc tgttattgtc ctgtgtgtac agtatatata tgtatatata ttttaatttt
     1081 ttaatttaag cgaagactaa gatcaaccat ttgatgctgc aggggccaag tgggacctgg
     1141 gaggggcaaa ttggaaagac agaaagagat gcagggtcca tgtgggggca aattcagacg
     1201 caaaagagtg gaggctggct ctcggggcgg gcaccagcct ggccaccggt ggttgtcccc
     1261 atgtcctgta aagtgtctct gtctcccagt ggagaggctg aatacgcagg ccagcaggag
     1321 cctccttttc cccagccttg atagggccac caggtacaac caggtctaag tgggaggacc
     1381 agggtccatg acatcccagc agtccccacc ctcactgtcc ctggccccag gtcctgcctc
     1441 tacccagggt ccccacctcc acggtctatc tcattttctg ttctcatttc acagagttgt
     1501 acaaggagag aactcagcat ggcggggttg gttctttggt ttcgttggtt ggttggttta
     1561 atttaataat ttgtaaagtg acattcctct tcctttttac actttcagct catatttaac
     1621 ctctgtttgg gaaaaaacga tcctcgtaac tgtacatttt ttttgacctc ctaataatga
     1681 caagaataaa ttacaatttt gtgttgg
//
