LOCUS       NM_198737               2139 bp    mRNA    linear   ROD 12-NOV-2024
DEFINITION  Rattus norvegicus ARL6 interacting reticulophagy regulator 1
            (Arl6ip1), mRNA.
ACCESSION   NM_198737 XM_001078034 XM_001078720
VERSION     NM_198737.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Yamamoto,Y., Yoshida,A., Miyazaki,N., Iwasaki,K. and Sakisaka,T.
  TITLE     Arl6IP1 has the ability to shape the mammalian ER membrane in a
            reticulon-like fashion
  JOURNAL   Biochem J 458 (1), 69-79 (2014)
   PUBMED   24262037
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   3  (bases 1 to 2139)
  AUTHORS   Akiduki,S. and Ikemoto,M.J.
  TITLE     Modulation of the neural glutamate transporter EAAC1 by the
            addicsin-interacting protein ARL6IP1
  JOURNAL   J Biol Chem 283 (46), 31323-31332 (2008)
   PUBMED   18684713
REFERENCE   4  (bases 1 to 2139)
  AUTHORS   Lui,H.M., Chen,J., Wang,L. and Naumovski,L.
  TITLE     ARMER, apoptotic regulator in the membrane of the endoplasmic
            reticulum, a novel inhibitor of apoptosis
  JOURNAL   Mol Cancer Res 1 (7), 508-518 (2003)
   PUBMED   12754298
REFERENCE   5  (bases 1 to 2139)
  AUTHORS   Pettersson,M., Bessonova,M., Gu,H.F., Groop,L.C. and Jonsson,J.I.
  TITLE     Characterization, chromosomal localization, and expression during
            hematopoietic differentiation of the gene encoding Arl6ip,
            ADP-ribosylation-like factor-6 interacting protein (ARL6)
  JOURNAL   Genomics 68 (3), 351-354 (2000)
   PUBMED   10995579
REFERENCE   6  (bases 1 to 2139)
  AUTHORS   Ingley,E., Williams,J.H., Walker,C.E., Tsai,S., Colley,S.,
            Sayer,M.S., Tilbrook,P.A., Sarna,M., Beaumont,J.G. and Klinken,S.P.
  TITLE     A novel ADP-ribosylation like factor (ARL-6), interacts with the
            protein-conducting channel SEC61beta subunit
  JOURNAL   FEBS Lett 459 (1), 69-74 (1999)
   PUBMED   10508919
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC099071.1.
            
            On or before Feb 12, 2007 this sequence version replaced
            XM_001078034.1, XM_001078720.1, NM_198737.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC099071.1, EV765474.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00155336, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q35"
     gene            1..2139
                     /gene="Arl6ip1"
                     /note="ARL6 interacting reticulophagy regulator 1"
                     /db_xref="GeneID:293551"
                     /db_xref="RGD:735205"
     exon            1..91
                     /gene="Arl6ip1"
                     /inference="alignment:Splign:2.1.0"
     CDS             56..667
                     /gene="Arl6ip1"
                     /note="ADP-ribosylation-like factor 6-interacting protein;
                     ADP-ribosylation factor-like 6 interacting protein 1;
                     ADP-ribosylation factor like GTPase 6 interacting protein
                     1"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein
                     6-interacting protein 1"
                     /protein_id="NP_942032.1"
                     /db_xref="GeneID:293551"
                     /db_xref="RGD:735205"
                     /translation="MAEGDNRSSNLLAVETASLEEQLQGWGEVMLMADKVLRWERAWF
                     PPAIMGVVSLLFLIIYYLDPSVLSGVSCFVMFLCLADYLVPILAPRIFGSNKWTTEQQ
                     QRFHEICSNLVKTRRRAVGWWKRLFTLKEEKPKMYFMTMIISLAAVAWVGQQVHNLLL
                     TYLIVTFVLLLPGLNQHGIILKYIGMAKREINKLLKQKEKKNE"
     exon            92..225
                     /gene="Arl6ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            226..345
                     /gene="Arl6ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            346..463
                     /gene="Arl6ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            464..548
                     /gene="Arl6ip1"
                     /inference="alignment:Splign:2.1.0"
     exon            549..2116
                     /gene="Arl6ip1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgctggtgtt gggtttggtg tgttcgcgct cgttgataac cgtgcgtctg gaacgatggc
       61 cgagggggat aaccgcagca gcaacctgct ggccgtggag actgcaagtc ttgaagagca
      121 gctgcaaggc tggggagaag tgatgctgat ggctgacaaa gtccttcggt gggaaagagc
      181 ctggtttcca cctgccatta tgggtgtggt ctccctgctg ttcctgatta tctattatct
      241 cgatccatct gtgctgtccg gtgtttcctg ttttgtcatg tttttgtgcc tggctgacta
      301 ccttgttccc attctagcac caaggatttt tggctctaat aaatggacca ctgaacaaca
      361 gcaaagattt catgaaatct gcagtaatct agtaaaaact cgacgcagag ctgtgggctg
      421 gtggaaacgc ctctttacgc taaaggaaga aaagcctaaa atgtacttca tgaccatgat
      481 catttctctt gctgcggttg cttgggtggg acagcaagtc cacaacctgc ttctcaccta
      541 cctgattgtg acttttgtgc tgttgcttcc tggactaaac caacatggaa tcatcttgaa
      601 gtacattgga atggccaaaa gggagataaa caagcttctc aagcaaaaag aaaagaaaaa
      661 cgaatagtgt ggctgcgtgg agtgtgccct ggccctgggg acagttgtcc ggtgctggct
      721 ggacactgaa atgttgcagt ggctctttgc ttccctcatt ctgcccttgc taatagagat
      781 tctcacaggc caggctccgt gctgtgtcta gtgccaggtg tagctgggta cattcccgtc
      841 agtacgactt gttttattga gtttttattt ttgacaactt cctttaaaat actaaagtgg
      901 tgaactctac tgttctgtac agtgaactgt gactttgcat aattgtcgat gtttgcttta
      961 gctatattca aggtagtggt ctgtggctac aggaagctgg ttctactgtc tgcttccaca
     1021 gtctgcttaa cagactgtct ttgagtacag aggtcaggtt taccacttct gatgaagaga
     1081 ccacttaaga ttcattcctg attttccacc gtgggagaat acccatggaa caagataaaa
     1141 ttaattcctc acccaagtgt gtggaagctc ctctctcgta cgaaactcaa cagtttcagg
     1201 gagcaaattg cccctttgtt ccctcgagga atctgacagg ctttgactga cctcacattc
     1261 cccttgcact gcttaaggtt agtcctagtc cataatggct tttgagcaac aagcttctag
     1321 aagattgtat ttgggaattt tagcagtgtt tttgttctgg atttaagctg acttaaaatg
     1381 ttcgtgactt taagccagcc aaggataaaa gtatcctttg ttcactgagt agaaaactag
     1441 attatctatt aatatttaag accagaaaaa caaggcttta aaagcctgga aaatctgatt
     1501 tgttttcgta gtattggctg tatttcagtc actccagctt tgcacttcag agacagtgtt
     1561 tactggtgtt tgactttccc cttgatattt ctcagaaaaa tgcagggctg cagctgagag
     1621 cagactgctg atcggtgact ttggtctgca tagcttttgc aactccttaa gcttactgtg
     1681 atcatgtgcc ctctcagtag gtaggctttt agagcagtcg gaatctgcag aactcaacct
     1741 ctgagggcca aataggacac atttgggaac agctccttaa cccatgaact agctgtaaca
     1801 tggtttgtgg atccattgca ctgatgctgt gaagactgaa cctgtctgtc tgcctctgtt
     1861 cactcccctc cctagcactg tactcagtgg tgcctcttgt agcatgtatg tgtttgtttt
     1921 tcaatgtttc ctgacaccca ctttgatttt acacgttttc ttgtaaataa gcctgccttc
     1981 cttcctgtgt acatgtatat gtgtgtgtga gactaataca tgttctacta gttaactact
     2041 ttggcagttt taatcatttc ttctactttg ttttgtggta aaaggggaaa aattaaaaaa
     2101 aaaaaaacag ttggaaaaaa aaaaaaaaaa aaaaaaaaa
//
