LOCUS       NM_001109046            1295 bp    mRNA    linear   ROD 12-NOV-2024
DEFINITION  Rattus norvegicus ARF like GTPase 5C (Arl5c), mRNA.
ACCESSION   NM_001109046 XM_001081387 XM_006247396 XM_573187
VERSION     NM_001109046.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On or before Apr 16, 2021 this sequence version replaced
            XM_006247396.4, NM_001109046.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.1808614.1,
                                           SRR26643292.43018.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-87                JAXUCZ010000010.1  83488206-83488292   c
            88-148              JAXUCZ010000010.1  83487444-83487504   c
            149-296             JAXUCZ010000010.1  83485923-83486070   c
            297-380             JAXUCZ010000010.1  83485116-83485199   c
            381-532             JAXUCZ010000010.1  83483988-83484139   c
            533-1295            JAXUCZ010000010.1  83481540-83482302   c
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..1295
                     /gene="Arl5c"
                     /gene_synonym="RGD1563128"
                     /note="ARF like GTPase 5C"
                     /db_xref="GeneID:497990"
                     /db_xref="RGD:1563128"
     exon            1..87
                     /gene="Arl5c"
                     /gene_synonym="RGD1563128"
                     /inference="alignment:Splign:2.1.0"
     CDS             42..581
                     /gene="Arl5c"
                     /gene_synonym="RGD1563128"
                     /note="ADP-ribosylation factor like GTPase 5C;
                     ADP-ribosylation factor-like 5C"
                     /codon_start=1
                     /product="putative ADP-ribosylation factor-like protein
                     5C"
                     /protein_id="NP_001102516.1"
                     /db_xref="GeneID:497990"
                     /db_xref="RGD:1563128"
                     /translation="MGQLIAKLMRIFGSQEHKVIIVGLDNAGKTTILYQFLTNEVVHT
                     CSTIGSNVEEIVFQRTHFLMWDLGGQEALRSTWETYYSNAEFVILVIDSTDRNRLSTS
                     REELYKILAHEALQDASVLIFANKQDVKDSMTTAEISQFLTLSAIKDHPWHIQGCCAL
                     TGEGLLAGLQWMHSQATTN"
     exon            88..148
                     /gene="Arl5c"
                     /gene_synonym="RGD1563128"
                     /inference="alignment:Splign:2.1.0"
     exon            149..296
                     /gene="Arl5c"
                     /gene_synonym="RGD1563128"
                     /inference="alignment:Splign:2.1.0"
     exon            297..380
                     /gene="Arl5c"
                     /gene_synonym="RGD1563128"
                     /inference="alignment:Splign:2.1.0"
     exon            381..532
                     /gene="Arl5c"
                     /gene_synonym="RGD1563128"
                     /inference="alignment:Splign:2.1.0"
     exon            533..1295
                     /gene="Arl5c"
                     /gene_synonym="RGD1563128"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggctgctg agccccgcag gtccccagct ccgggagtgc catgggacag ctgatagcca
       61 aactgatgcg aatttttggg agccaggagc acaaagtcat catcgtggga ctggacaatg
      121 caggaaagac caccattctc taccagtttc tgaccaacga ggttgttcat acctgttcca
      181 ccattggtag caacgtggaa gaaattgttt ttcagaggac ccacttcctc atgtgggacc
      241 taggaggtca ggaggcactg cgctccacct gggagacata ctactcgaat gctgagtttg
      301 tcatccttgt gatagatagt actgaccgga atcggctgtc gacctcccgg gaggagctgt
      361 ataagatcct ggcccatgag gcacttcagg atgcctcagt gctgatcttc gccaacaagc
      421 aggatgtgaa agactccatg accacagcag agatctccca atttctcaca ctcagtgcca
      481 tcaaagacca cccgtggcat atccagggct gctgtgctct cacaggagaa gggttgctgg
      541 ctgggctcca gtggatgcac tctcaggcca ctaccaactg atgtcccagc ccaaggctaa
      601 ccggaagcca catggttagc accagtgaga agcaccagtc atttgttggt ggaacaaggg
      661 tggttataga cagagagatt actacagtcc tctcaactgt caccaagaac tggatcaaag
      721 acttcaagtt ggtgcagaca ggactacaga tgaaactgcc cctcccccca actccatcac
      781 tgcaggtgtg tggagacatc agggaactcc tgggggtact ggggacatca ggtctctccc
      841 agccctcacc ttctgtctgc ccggcaagca agagatcttc gacattgttc catatccact
      901 ggacgaagga gattctgata aaagaggcga taggacctgg ccaaaaactg ggggggtggg
      961 ggtggagagt tggtgaatgg gaagatagaa cattccagac agacgcagtc ctccacactg
     1021 cagaattcta agcccttcca cccccacccg ctcgccttcc tgctccttct tagaatccag
     1081 gactacagct ttggggggcc gtggaggggg gaggagtcac cacgtggaat ctccttccct
     1141 ctcagcatcc ttccactatg ggtgtgatgg gtttgagtcc tcttaaatgt taaagctttc
     1201 tataggacct acttagtttg tctttatgtc atattttttt taaacatctc attaagattt
     1261 aaaacttaaa ggtacataat tagtgcccct gaaaa
//
