LOCUS       NM_053979               1182 bp    mRNA    linear   ROD 12-NOV-2024
DEFINITION  Rattus norvegicus ARF like GTPase 5A (Arl5a), mRNA.
ACCESSION   NM_053979
VERSION     NM_053979.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Rosa-Ferreira,C., Christis,C., Torres,I.L. and Munro,S.
  TITLE     The small G protein Arl5 contributes to endosome-to-Golgi traffic
            by aiding the recruitment of the GARP complex to the Golgi
  JOURNAL   Biol Open 4 (4), 474-481 (2015)
   PUBMED   25795912
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1182)
  AUTHORS   Breiner,M., Schurmann,A., Becker,W. and Joost,H.G.
  TITLE     Cloning of a novel member (ARL5) of the ARF-family of Ras-related
            GTPases
  JOURNAL   Biochim Biophys Acta 1308 (1), 1-6 (1996)
   PUBMED   8765741
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097294.1.
            
            On Jun 3, 2007 this sequence version replaced NM_053979.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097294.1, X78604.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760476, SAMEA5760494
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q12"
     gene            1..1182
                     /gene="Arl5a"
                     /gene_synonym="Arl5"
                     /note="ARF like GTPase 5A"
                     /db_xref="GeneID:117050"
                     /db_xref="RGD:621327"
     exon            1..237
                     /gene="Arl5a"
                     /gene_synonym="Arl5"
                     /inference="alignment:Splign:2.1.0"
     CDS             192..731
                     /gene="Arl5a"
                     /gene_synonym="Arl5"
                     /note="ADP-ribosylation factor-like 5; ADP-ribosylation
                     factor-like 5A; ADP-ribosylation factor like GTPase 5A"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein 5A"
                     /protein_id="NP_446431.1"
                     /db_xref="GeneID:117050"
                     /db_xref="RGD:621327"
                     /translation="MGILFTRIWRLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHT
                     SPTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVT
                     REELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCAL
                     TGEGLCQGLEWMMSRLKIR"
     exon            238..298
                     /gene="Arl5a"
                     /gene_synonym="Arl5"
                     /inference="alignment:Splign:2.1.0"
     exon            299..446
                     /gene="Arl5a"
                     /gene_synonym="Arl5"
                     /inference="alignment:Splign:2.1.0"
     exon            447..530
                     /gene="Arl5a"
                     /gene_synonym="Arl5"
                     /inference="alignment:Splign:2.1.0"
     exon            531..682
                     /gene="Arl5a"
                     /gene_synonym="Arl5"
                     /inference="alignment:Splign:2.1.0"
     exon            683..1149
                     /gene="Arl5a"
                     /gene_synonym="Arl5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgcgagcca ggcgagcgcc gcggcggtag cggcggggcc tcgcgcgtgg ctaggtggcc
       61 tgggctgcgg cctccccgcg ggtccctgga agcgggcgcg cggccggcgc gggagcagag
      121 gcggaggccc cggcgcgtcc ttctgccccg cagcctgagc ccgggcggct ggagggctcc
      181 gctgcccgag gatgggaatt ctcttcaccc ggatctggag actgttcaat caccaggagc
      241 acaaagttat tattgttggg ctggacaatg ccgggaagac taccatcctt taccagtttt
      301 ccatgaatga agttgtacat acatctccta caataggaag caatgtggaa gagattgtgg
      361 ttaataatac acgtttcctg atgtgggata ttggtggcca agaatccctt cgttcttcct
      421 ggaacactta ttatactaac acagagtttg taatagttgt ggtggacagc acagacagag
      481 aaagaatttc tgtaactaga gaagagctct acaaaatgct agcccacgag gacctaagga
      541 aagctgggtt gctgattttt gctaataaac aagatgttaa agaatgcatg acagtagcag
      601 aaatctccca gtttttgaag ctcacttcta taaaagacca ccaatggcat atccaagcat
      661 gctgtgctct cactggcgag gggttatgcc aaggacttga atggatgatg tcacggctga
      721 agatcagatg atctcttctg accccttctc atggactctg tataaacaaa gtgctggact
      781 ttatctgaaa gctgcaaaaa atggtttaga tatatttata ataaactgac ttaagagttt
      841 tctacaagaa gaaaattaag accatttatt tgaaaacaga tgaaatgtca ccacctcgtt
      901 tgctctctca ttccttccaa acctgtgact ggtattttct catgatgaat cctctccgga
      961 catgggagag ttctaatgaa tacaagggag aggaagacat ttgaacttgg agctttattt
     1021 cctcgacgag cccaccctgc cccaagtgaa tgttcccttt tcattacatt gaatcaaata
     1081 cggatcagca cggatactgt ttccagtttt taaaaatgta ataatattat ggaaagtatt
     1141 ttacttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//
