LOCUS       NM_001306054            3436 bp    mRNA    linear   ROD 12-NOV-2024
DEFINITION  Rattus norvegicus ARF like GTPase 4C (Arl4c), mRNA.
ACCESSION   NM_001306054 XM_003754546 XM_008767338
VERSION     NM_001306054.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3436)
  AUTHORS   Tang,N., Luo,X., Ding,Z., Shi,Y., Cao,X. and Wu,S.
  TITLE     Single-Cell Multi-Dimensional data analysis reveals the role of
            ARL4C in driving rheumatoid arthritis progression and Macrophage
            polarization dynamics
  JOURNAL   Int Immunopharmacol 141, 112987 (2024)
   PUBMED   39182267
  REMARK    GeneRIF: Single-Cell Multi-Dimensional data analysis reveals the
            role of ARL4C in driving rheumatoid arthritis progression and
            Macrophage polarization dynamics.
REFERENCE   2  (bases 1 to 3436)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   3  (bases 1 to 3436)
  AUTHORS   Matsumoto,S., Fujii,S., Sato,A., Ibuka,S., Kagawa,Y., Ishii,M. and
            Kikuchi,A.
  TITLE     A combination of Wnt and growth factor signaling induces Arl4c
            expression to form epithelial tubular structures
  JOURNAL   EMBO J 33 (7), 702-718 (2014)
   PUBMED   24562386
  REMARK    GeneRIF: Arl4c expression induced by a combination of growth factor
            signaling mechanisms is involved in tube formation.
REFERENCE   4  (bases 1 to 3436)
  AUTHORS   Wei,S.M., Xie,C.G., Abe,Y. and Cai,J.T.
  TITLE     ADP-ribosylation factor like 7 (ARL7) interacts with alpha-tubulin
            and modulates intracellular vesicular transport
  JOURNAL   Biochem Biophys Res Commun 384 (3), 352-356 (2009)
   PUBMED   19409876
REFERENCE   5  (bases 1 to 3436)
  AUTHORS   Hofmann,I., Thompson,A., Sanderson,C.M. and Munro,S.
  TITLE     The Arl4 family of small G proteins can recruit the cytohesin Arf6
            exchange factors to the plasma membrane
  JOURNAL   Curr Biol 17 (8), 711-716 (2007)
   PUBMED   17398095
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001306054.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360176.1280237.1,
                                        SRR22582416.1074815.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3436              JAXUCZ010000009.1  96748075-96751510   c
FEATURES             Location/Qualifiers
     source          1..3436
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q35"
     gene            1..3436
                     /gene="Arl4c"
                     /gene_synonym="Arl4c-ps1"
                     /note="ARF like GTPase 4C"
                     /db_xref="GeneID:103693239"
                     /db_xref="RGD:1589685"
     exon            1..3436
                     /gene="Arl4c"
                     /gene_synonym="Arl4c-ps1"
                     /inference="alignment:Splign:2.1.0"
     CDS             1..579
                     /gene="Arl4c"
                     /gene_synonym="Arl4c-ps1"
                     /note="ADP-ribosylation factor-like 4C, pseudogene 1; ADP
                     ribosylation factor like GTPase 4C"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein 4C"
                     /protein_id="NP_001292983.1"
                     /db_xref="GeneID:103693239"
                     /db_xref="RGD:1589685"
                     /translation="MGNISSNISAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPT
                     IGFNTEKIKLSNGTAKGISCHFWDVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVDRLE
                     EAKTELHKVTKFAENQGTPLLVIANKQDLPKSLPVAEIEKQLALHELIPATTYHVQPA
                     CAIIGEGLTEGMDKLYEMILKRRKSLKQKKKR"
ORIGIN      
        1 atgggcaaca tctcctccaa catctcggcc ttccagtctc tgcacatcgt tatgctgggc
       61 ttggactcgg ccggcaagac cacggtgctc taccggctca agttcaacga gttcgtgaac
      121 acggtgccca ccatcggctt taacaccgag aagatcaaac tgagcaacgg cactgccaag
      181 ggcatcagct gccacttctg ggacgtgggc ggccaggaga agctacggcc gttgtggaag
      241 tcctacagcc gctgcacgga cggcatcatc tacgtggtgg attcggtgga cgtggatcgg
      301 ctggaggagg ccaaaacgga gctgcacaag gtgaccaagt ttgccgagaa ccagggcaca
      361 ccgctgctgg tcatcgccaa caagcaggac ctgcccaagt ctctgccggt ggccgagatt
      421 gagaagcaac tggcgctaca cgagctcatc ccggccacca cctaccatgt ccagccggcg
      481 tgcgccatca tcggcgaggg cctcaccgag ggtatggaca agctctatga gatgatcctg
      541 aaacgcagga agtctctcaa gcagaagaag aaacggtaat gctctcaagc agcgatctgg
      601 agcgaggctg agcgagcgag ccagtgagtg aatgaatgga cgtctgggtt gagcgagaac
      661 ccgcgaacaa agacaacgaa ccaaagcgat gattcgaatt tttaaaacac gatctctgta
      721 tccaaataca ggacttggag acttagcccg ggtgtggagg ctgcataacc acccatctcg
      781 tcacctgccc caccccccac cccagctcag aggacctttt gtctaaatgc ttgagctacg
      841 ggtggggtgg gtagggggac tggtggggag tggacgcgag ggtcccgtgg tgtgccctct
      901 ggccccaggt ggcaagcttg gatgtcagag agacaaaagc gatttcttct tgctccagca
      961 gggccagaag ttcaggctgc ccagccccca ctgcgggggg gaatcacgtg tgagttacct
     1021 gaggtatgca gttcacacag aaccctgggg atacccggga gggaacggat tggcactggg
     1081 gtgtactgat ggggggtggg gatgaccgct cctttcattc tggagctgtg ggaactgagt
     1141 aattttatgt cacagggcag gtccctgttg caatttcatt tgtcctgctc tgggcccaaa
     1201 ggaggtggtg gtttggggcc agccagagga ctgtctcgga ccgtgcggca gctggagggc
     1261 ccaggatgct gtgcttctgg acttggctgg gaatggcctg gaagacgcca cttttcaggg
     1321 gtgggtgtgt gtggttttgt tgagaactgc ttttcagcct gggatgagac ctcttccaga
     1381 tggcccagtc catgtgtagg tcattctccc ataaagagac caataaaaca aagaacagaa
     1441 aaccattgga ggtggtggca gtacaggtgt ttaaagggtg aggttctcga cattaatgct
     1501 gtgcgtgcgt gtgcgtgtgt gtgtgtgcac ttggtactgt ataatctgca taagaactgg
     1561 accctctgga tggaatttca aaatctctca gccaactgat tggtttggag gaccacacca
     1621 gctacagatg tgtgctgaat tgcaaaatgg tcttcttaac aagggggagg gggagtctga
     1681 taataataac cacgtggtga taggtttcgg gctttttttt tttttttttt ttaataaaac
     1741 cacctccaca aatgaattct cttcacctta ggagaaaaag actctgccct tttgtggccc
     1801 tcgacactgc aagtgcagac ctgttcagat ttctgagctg ggtctttgta gcctatctgg
     1861 tttcagtatt ttactcaaaa tgtgtcctta gaatatttga tgtcattcac cggaagaata
     1921 aaaccccacc ttgttaaagc tgaccccatt tgcatggaat cgaagagagg aaaagtctga
     1981 aggatagtcc tttggaaatc acccttgcgg gagcgggcct ggcctcaggg ccagccagca
     2041 ctttggttaa aggcaaacaa caatgagtgc ttgagaagga agcgggcgtg tgacgtcatg
     2101 gtcactggta ctcaggcact tcacagttta cttgaaagag gctttggaaa aatagataaa
     2161 gtgaaagatt aaatacatat ttttaataag gtaattttaa aaaatccttt ataatcagga
     2221 gtgagtcttg gcttgttaaa agctgtcatt tatcttgaaa cacagtatcg aaagagaaat
     2281 ttacgattga ctttgtttct ttttttcttt gaagctctcc tctgaaccca tgttttagga
     2341 taggattctt tcgtttccct ccatggcaac gcaatgctgt gtcaagggag ccatggctgt
     2401 gagtgagcac ggagttggtc acaatatgag cccatcccta ttgtccttga tactcttagg
     2461 agtatattta agaaccatag gcagaaatca tggcttcctg cttgaaacct gatccttaga
     2521 agattgtttt gaaagctgaa gtctagcggc cccatgctct ttcttgtgtg tttggtagcc
     2581 ctccaactga ctggtctttt tgtacacaga gctaagcagt ggttagcagc ctgcaggatc
     2641 tgtttacaca gcaactgtgg attattggca tctccgtggg ctggtcccat gggctgaaga
     2701 ttctgtatag aattattaaa aaaaaaattc caccttcttt ttattttctt catagtttct
     2761 taagcacttt gacattttgg tagttccacg atatggagag aataatatat ttattttgtg
     2821 acattgcata tgccaaatac tgtagctttc ctgtgctcac gatacctgcg ttccaggtca
     2881 gtgtttcgat cctggcctgc cggaacaatg gctcgggatg gttttgtgat gttttttccc
     2941 ccctcagcca ccattatcaa tatttaaagg tgcagttgac tgttagtagt tgtgtggtaa
     3001 agtcaagccc tgtggtgtat cagcaaatag ttaagagtct cagttgattt ctgtaatgtt
     3061 tgacctaata aatgcccatt tcatctgtga caagacatag cccagtgaac gtcactgtgg
     3121 tggtgccatg ggggagttcc catcacatgc cagccagacc tagtgacact tctgcccttt
     3181 gggttcccat agaggaattt ggcctcccca agtgaggttt ggaatggttt ctgacagaca
     3241 cacggggagg ccagtgtgga ttgagagctg ttctcctcac acattctgtg aaagtgttgg
     3301 aacccctggc ttccggtttt ggttttcctg taattctgtc ttcacatcag acacttttct
     3361 ctgtttccat tccctccccc cttttataat gcatatctga tgctgtgaac agaaataaac
     3421 tatttataca atcaaa
//
