LOCUS       NM_001399077            2052 bp    mRNA    linear   ROD 12-NOV-2024
DEFINITION  Rattus norvegicus ARF like GTPase 2 binding protein (Arl2bp),
            transcript variant 2, mRNA.
ACCESSION   NM_001399077 XM_006255120
VERSION     NM_001399077.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Muromoto,R., Sekine,Y., Imoto,S., Ikeda,O., Okayama,T., Sato,N. and
            Matsuda,T.
  TITLE     BART is essential for nuclear retention of STAT3
  JOURNAL   Int Immunol 20 (3), 395-403 (2008)
   PUBMED   18234692
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Zhou,C., Cunningham,L., Marcus,A.I., Li,Y. and Kahn,R.A.
  TITLE     Arl2 and Arl3 regulate different microtubule-dependent processes
  JOURNAL   Mol Biol Cell 17 (5), 2476-2487 (2006)
   PUBMED   16525022
REFERENCE   3  (bases 1 to 2052)
  AUTHORS   Sharer,J.D., Shern,J.F., Van Valkenburgh,H., Wallace,D.C. and
            Kahn,R.A.
  TITLE     ARL2 and BART enter mitochondria and bind the adenine nucleotide
            transporter
  JOURNAL   Mol Biol Cell 13 (1), 71-83 (2002)
   PUBMED   11809823
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Jan 4, 2022 this sequence version replaced XM_006255120.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CA340701.1, BP504153.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840107 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-223               JAXUCZ010000019.1  10352215-10352437   c
            224-285             JAXUCZ010000019.1  10350334-10350395   c
            286-392             JAXUCZ010000019.1  10347015-10347121   c
            393-478             JAXUCZ010000019.1  10345839-10345924   c
            479-575             JAXUCZ010000019.1  10345217-10345313   c
            576-2052            JAXUCZ010000019.1  10342895-10344371   c
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19p13"
     gene            1..2052
                     /gene="Arl2bp"
                     /note="ARF like GTPase 2 binding protein"
                     /db_xref="GeneID:498910"
                     /db_xref="RGD:1561471"
     exon            1..223
                     /gene="Arl2bp"
                     /inference="alignment:Splign:2.1.0"
     CDS             186..677
                     /gene="Arl2bp"
                     /note="isoform 2 is encoded by transcript variant 2;
                     ADP-ribosylation factor-like protein 2-binding protein;
                     binder of ARF2 protein 1; ARF-like 2-binding protein;
                     ADP-ribosylation factor like GTPase 2 binding protein;
                     ADP-ribosylation factor-like 2 binding protein"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein 2-binding
                     protein isoform 2"
                     /protein_id="NP_001386006.1"
                     /db_xref="GeneID:498910"
                     /db_xref="RGD:1561471"
                     /translation="MDALEEESFALSFSSASDAEFDAVVGCLEDIIMDAEFQLLQRSF
                     MDKYYQEFEDTEENKLTYTPIFNEYISLVEKYIEEQLLERIPGFNMAAFTTTLQHHKD
                     EVAGDIFDMLLTFTDFLAFKEMFLDYRAEKEGRGLDLSSGLVVTSLCKSSSTPASQNN
                     LRH"
     exon            224..285
                     /gene="Arl2bp"
                     /inference="alignment:Splign:2.1.0"
     exon            286..392
                     /gene="Arl2bp"
                     /inference="alignment:Splign:2.1.0"
     exon            393..478
                     /gene="Arl2bp"
                     /inference="alignment:Splign:2.1.0"
     exon            479..575
                     /gene="Arl2bp"
                     /inference="alignment:Splign:2.1.0"
     exon            576..2052
                     /gene="Arl2bp"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgggcccag ccaggagccg caggccgggc ctcgcgcgat cgcccggccg ggcgcgggcg
       61 cggccttctg cgggtccttg atgcggttga ggcggcgcgg gtcagagaga agcccggccc
      121 ggtggcgggc gcggtaggag gcggcggggc cgcgggcccg gcccggagac tgcggcgcct
      181 ctacgatgga cgccttagag gaagagagct tcgcgctgtc cttctcctct gcctctgatg
      241 cagaattcga tgctgtggtt ggatgtttag aggacattat tatggatgct gagttccagc
      301 tactgcagag aagcttcatg gacaagtact accaggaatt tgaagacact gaagagaata
      361 agctcaccta tactcccatt tttaatgaat atatttccct ggtagagaag tacattgaag
      421 agcagttgct ggagcgtatc ccaggcttca atatggcggc cttcaccacc acactgcagc
      481 accataaaga tgaagtggct ggcgacatct ttgacatgct gctcacattc acggatttcc
      541 tggctttcaa ggagatgttc ctggactaca gagcagaaaa ggaaggccga ggactggact
      601 taagcagcgg cttggtggtg acttctctgt gtaagtcatc ttctacgcca gcttcccaga
      661 acaacctacg gcactagatc cctccttcac acagtgggtg tgatggatat gaggtcacca
      721 gcccagcagg ctcagagaaa tatgggctaa tgacagatgc atcctgcaag acccactgtg
      781 ccacagccct tcgttcatgt gaagtattga cgagtcctgg aaaacatgac tgaccctcct
      841 ggcccttgtc agaacctcct tcctgtagtc agtaaccctc acgttccccg ctcccatcct
      901 catacagaca cctctcccag gcacttctga gaggctcctc tgaatcaagc ccaggttggc
      961 cgcctcgcct gggggtactc tttccccagc aacatggtag tgtagtgtgt caacagtgtg
     1021 gacaccacat cactatgatc ccttcatcct gcaggcttta gtgagtcttt gttttcccac
     1081 cgttttcacc tgggtccgtt tcaggcctca gcctcaatgt ggcttttgtt tgggtgtgtt
     1141 tatctaggga gatgcaggcc agctgcctgt cctggtttct gaatctcctg ggattacagc
     1201 ttgactggct gtcgggattc actgagaggg ctgtcctcta cccacaagtg aacatgaact
     1261 ccaaccttac attaacagtc ctttcaccag cgaaccctgc tggtcttgat gtagccccac
     1321 tattctactc tctaagcatt attttcaaga aacctatttt tatagatgaa aactcaggct
     1381 aacctagtga gtatgacctt ggggtgccca tgatcaacca cttaaagatc agagtattat
     1441 atgctgtgtg ctttttagtt atgagtgttg tgagtgcaaa ctgctttcca atggtgtcct
     1501 ctcgctgggc accagtacaa acaggctgtg tgctagaacg ggccacagct ctgtcgggat
     1561 agcatgctgg gtgtgtccgt gcatgtttgt gtgccatgct gtccaatggc gtgctgggtg
     1621 tgcttgtgca tgcttgcgtg cagtccttcg tgcaggccgg agagcggggg tttttactgg
     1681 ggggttggga ctttggtgtt tgttttcata cagtgtctcc tgctaagtta atgctcccct
     1741 gatccagctc gttctggtgg gaggggcagg acacagtttt tctggtcatc tgtcatcttt
     1801 ggtggacggc caccaaccag aaagcatgtg tgtcacatct ctagaaagaa gagaacactt
     1861 cagatcctaa tgtatacttt tgactttaac ttttatagta aacataagaa tccacgatga
     1921 ctttccatgt gaccattccg actttaaagg atttaagcta agctaagctc tgttttttct
     1981 gtagctgtgt gtctgtcact taggactttt gtaaaatgag taaaatttga ggtgttttag
     2041 caagaataat aa
//
