LOCUS       NM_001398949             936 bp    mRNA    linear   ROD 12-NOV-2024
DEFINITION  Rattus norvegicus ARF like GTPase 16 (Arl16), mRNA.
ACCESSION   NM_001398949 XM_003750985
VERSION     NM_001398949.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Dec 28, 2021 this sequence version replaced XM_003750985.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BE114505.1, CB607775.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN12840109,
                                           SAMN12840111 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-150               JAXUCZ010000010.1  106237819-106237968 c
            151-209             JAXUCZ010000010.1  106237638-106237696 c
            210-323             JAXUCZ010000010.1  106237131-106237244 c
            324-439             JAXUCZ010000010.1  106236457-106236572 c
            440-936             JAXUCZ010000010.1  106235792-106236288 c
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.3"
     gene            1..936
                     /gene="Arl16"
                     /note="ARF like GTPase 16"
                     /db_xref="GeneID:688311"
                     /db_xref="RGD:1590059"
     exon            1..150
                     /gene="Arl16"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..611
                     /gene="Arl16"
                     /note="ADP-ribosylation factor-like 16; ADP-ribosylation
                     factor like GTPase 16"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein 16"
                     /protein_id="NP_001385878.1"
                     /db_xref="GeneID:688311"
                     /db_xref="RGD:1590059"
                     /translation="MCLLLGAAGVGKTLLVKRLQKLSSGDGKGDLGEPPPTRPTVGTN
                     LTDIVAHRKITIRELGGCMSPIWSSYYGNCHSLLFMMDASNPTQLSASCMQLLGLLSA
                     EELAKASVLILFNKIDLPSYMTVEEIKSLMRLPDIIACAKQNITTVEISARNGTGLAT
                     VLLWLRNQHRHSS"
     exon            151..209
                     /gene="Arl16"
                     /inference="alignment:Splign:2.1.0"
     exon            210..323
                     /gene="Arl16"
                     /inference="alignment:Splign:2.1.0"
     exon            324..439
                     /gene="Arl16"
                     /inference="alignment:Splign:2.1.0"
     exon            440..936
                     /gene="Arl16"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgaccggagg tctatccaat gaaagctaag cggaggcggg cctcacgacg tggtagctcc
       61 gaggtactag cgccttgacc aggcaaggga tgtgtctcct gctaggagct gcgggagtcg
      121 gaaagaccct gctggtgaaa cgccttcaga agctgagctc gggagatggc aaaggtgacc
      181 tgggagagcc tccaccgacg cggcccacgg tgggcacaaa cctcacggac atcgtggccc
      241 acaggaagat caccatccga gagctcggag gatgcatgag ccccatctgg tccagttact
      301 atggaaactg ccattcgctc ttgttcatga tggacgcctc taaccccacc cagctctctg
      361 catcctgcat gcagctcttg ggccttcttt ctgcagaaga actggcaaaa gcctccgtcc
      421 tcatactctt caataaaatt gacctgccct cttacatgac cgtggaggaa ataaagtcat
      481 tgatgaggct tccagacatc attgcttgtg ccaagcagaa tatcaccacg gtagagataa
      541 gtgccaggaa cggcactggt ttggcaacag tgttgctctg gctccggaat caacacaggc
      601 acagcagttg actgggagat ggagaagtat ggctgacctg aggtgtttga taggagcagg
      661 ccacccagtg tatccgtaag tgatggaggc ctgcacagtg acctgtgaac aagcacactc
      721 acacaccact gtcatctcac ttctgaacag tggacccaag gcagagagga cagactgcag
      781 gtgtcatgtc tgctgggacg cctaccaaga aactggacct gctgagggtt ctggacggca
      841 cggagcccag gtcatttttg tagtgcaggc tctgccctgc tgagttttga tatcctgacc
      901 atgttgccca gaaaaaaaat ataaagttaa taagaa
//
