LOCUS       NM_001399590            3316 bp    mRNA    linear   ROD 12-NOV-2024
DEFINITION  Rattus norvegicus ARF like GTPase 15 (Arl15), mRNA.
ACCESSION   NM_001399590 XM_008760741
VERSION     NM_001399590.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3316)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   2  (bases 1 to 3316)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jan 12, 2022 this sequence version replaced XM_008760741.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582416.896081.1,
                                           SRR26360194.1292060.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-149               JAXUCZ010000002.1  47171388-47171536
            150-294             JAXUCZ010000002.1  47304521-47304665
            295-354             JAXUCZ010000002.1  47316667-47316726
            355-563             JAXUCZ010000002.1  47361776-47361984
            564-3316            JAXUCZ010000002.1  47552914-47555666
FEATURES             Location/Qualifiers
     source          1..3316
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q14"
     gene            1..3316
                     /gene="Arl15"
                     /gene_synonym="Arfrp2"
                     /note="ARF like GTPase 15"
                     /db_xref="GeneID:689079"
                     /db_xref="RGD:1597407"
     exon            1..149
                     /gene="Arl15"
                     /gene_synonym="Arfrp2"
                     /inference="alignment:Splign:2.1.0"
     CDS             102..716
                     /gene="Arl15"
                     /gene_synonym="Arfrp2"
                     /note="ADP-ribosylation factor related protein 2;
                     ADP-ribosylation factor-like 15; ADP-ribosylation factor
                     like GTPase 15"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein 15"
                     /protein_id="NP_001386519.1"
                     /db_xref="GeneID:689079"
                     /db_xref="RGD:1597407"
                     /translation="MSDLRITEAFLYMDYLCFRALCCKGPPPARPEYDLVCIGLTGSG
                     KTSLLSKLCSESPENVVSTTGFSIKAVPFQNAVLNVKELGGADNIRKYWSRYYQGSQG
                     VIFVLDSASSEDDLETARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFE
                     LEPLARGKRWILQPCSLDDVDALKDSFSQLINLLEEKDHEAMRM"
     exon            150..294
                     /gene="Arl15"
                     /gene_synonym="Arfrp2"
                     /inference="alignment:Splign:2.1.0"
     exon            295..354
                     /gene="Arl15"
                     /gene_synonym="Arfrp2"
                     /inference="alignment:Splign:2.1.0"
     exon            355..563
                     /gene="Arl15"
                     /gene_synonym="Arfrp2"
                     /inference="alignment:Splign:2.1.0"
     exon            564..3316
                     /gene="Arl15"
                     /gene_synonym="Arfrp2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttcgctgttg ctggcttttt cagtagctgc tcgctcgcag cccaagacgc tgcttttttt
       61 tttccgggtt cggagccatt ccggatgctt taggctgccg gatgtctgat ctccggataa
      121 ctgaggcgtt tctgtacatg gattatctgt gttttcgagc actttgctgc aagggaccac
      181 cacctgctcg ccccgaatat gatttggttt gtataggtct cacaggctct gggaagacca
      241 gtctgttgtc caagctctgc agcgaaagcc cggagaacgt tgtgtcaacc acaggtttta
      301 gtataaaggc agtgccattc cagaacgccg ttttgaatgt aaaagaactt ggaggagctg
      361 acaatatccg gaaatactgg agtcgctact accaaggctc tcaaggggtc atattcgtat
      421 tagacagcgc ctcctcagaa gatgatctag aaactgctag aaacgagctg cactctgctc
      481 tccagcaccc acagttatgc actttaccct tcttgatatt ggctaatcac caggacaagc
      541 cagcagcccg ctcagtacaa gagatcaaaa agtattttga acttgaacca ctggcacgtg
      601 gaaaacgctg gattctgcag ccctgctctc tggatgatgt ggacgcactg aaggacagct
      661 tctcccagct cataaacttg ttagaagaaa aggaccacga ggccatgagg atgtgagacc
      721 tgacccagaa gttccgggaa agccttgaac ccatcacgtt ccttccccgt cctgattcca
      781 cgttggcgtc aagactgaca cggctgcagt atccattttc ctctggctgt ttcagaccgt
      841 catctctctg ttaactgact gactcttcgg cagtcatggg ttatcttcgg cattaatgtc
      901 aagtacacac tactgaggga gaattgattc tctgtttacc actaattatc ttcaccacat
      961 gtctctccct tctgttggtc taaggatctc ttctctgctt tgtgctaaag tggacggaac
     1021 tcatggctca tggaaatgaa accccttctg aagacctcag aaaggctcac tcgctttcct
     1081 ggacttggga ttggaggatt ctgactgaga ctccacccag tatatacgcc attgacattt
     1141 ccatgatctc ttaggggttc aagtttttta cattttattt tatctcgtct ggttttcata
     1201 ttattttctt gtgtgtgtgg tgtgtgtggg atattgactt tgtaggctga gtggggaaaa
     1261 aaatggccac ccaaaacttc acccaatcat cttctggtaa ggctggctct gaacaatcta
     1321 gaaagtaggt gcacaaggat tgcttgaccc tgcagcagcc tcgtcccctc ccttaagggc
     1381 atcctcactg agggagtggg agccaattta ggcaagaaca agcatcactg atttgaattc
     1441 gatcagcttc tcaaatattt cttaacggag tcattagtct gcataaaacc aagctacaac
     1501 ataaccattt gcttttccta aaaatcagaa atgtttgaat gaaatccgga aattggcttt
     1561 tcaaataata aacattaaga gccaaagtcc taactcatgg ttagttagga cttaagtcct
     1621 aactctaagt taggacttaa gctggcatgg attggatgga gctcaaagac gagccccgtt
     1681 atttattcag caaatgctaa tgccaccgag gggagtctgc tcaggccccc attttgtagt
     1741 tagaggtctg tcagtatttt tattataaac ctctattttc aggggtgtca atgtgccctt
     1801 agagtatgct gggctactca gtctttgaaa ctgatttttt tttccactta atttaaatga
     1861 taaaatttgc ctagaataaa atgtacagtt ttagtgcaat ttagcacctt tgaccttttc
     1921 taaatcagga ctaatctatg gagattcaga ttcatagatg aaatactctt tgtcatacct
     1981 tgtagacact tgaccgctca ttaaaatact aagaggtcaa atgatagaaa actgatccct
     2041 atgcccaagc aataaaaaca aaacaaaaca aaacaaaaca aaaaaaaacc acgtctgtca
     2101 tttttaggta gtgtagactg atacccagat gccacagact taatgccata tttgtcacag
     2161 ggtggcagga aaccttgtga ctctcgagag gatagtctca gactccccac agcgctcaaa
     2221 tgcagtattt gtgatttcat cttgtaaatg gattttaata aaaaaaagac cccacacttc
     2281 tttaagcctt tttaaataca cacacacaca cacacacaca cacacacaca cacacacaca
     2341 cacggcacag accagagaag gacccacaac gatgcatttt gtctaaagta tccttgaata
     2401 tttttaaaac cgtgtggtga tccacgggca gcagcacaat tcccaggacc agttacacag
     2461 ttcctgtttt cattttgtcc tctcgtgctc atcttccgcg aaaataaata aataaatgat
     2521 tttttttcca ggcttcgctc tccctgcaag ttcattaaat gtagagtgtt gtcttttgaa
     2581 gatcctgtgg ctgagatctc ctcgccatct gttaaatgac ttcccgttgt ctgtgtgtgt
     2641 tcatgtgcgc cagcgatggg ctcctttctc cacagccccg agactgtctg aggcgacaca
     2701 gccgtcagaa tgaaaacatt atcaatcagt acccaacagc agctgttttt gacaagtttc
     2761 tgtctgacgc ctaatgctta acaactgtca taaggctctg tctttgtcta gcaggtcgca
     2821 gcgcgctgtc ttactgcttc ctcttggcat cctggactct gtaaccctag aatttgctgt
     2881 gcttgggaaa cccaggtggg gggaggggag agggaagtgg aggggacttg tgtcttgttc
     2941 ttacttttgt gtaaggtgcc acaggtgtct tagtctgcat attcagagat gtaggaaaac
     3001 aatccgttgt gtagttcctc ggtgagcatc ttgttatatt tatggaagtg acccattttt
     3061 tgtaccttct tagctaaagc agttgcccct ttttatactg gcaattaatt tatagaagac
     3121 tttgtatcga ccatcgttta cagtattggt tgctggataa ctgccacgtt gctctgtctt
     3181 tttattgaga tttaactcta tctagactta aaagttggca ggttcctgtg ggcatttgct
     3241 aggtaacaag accttgccct gttcacggtt tctatgattt ccactgtctc gcaatgaaaa
     3301 taaatgctta gtagaa
//
