LOCUS       XM_006254701            3225 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADP ribosylation factor like GTPase 14
            effector protein like (Arl14epl), transcript variant X2, mRNA.
ACCESSION   XM_006254701
VERSION     XM_006254701.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006254701.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006254701.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3225
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3225
                     /gene="Arl14epl"
                     /note="ADP ribosylation factor like GTPase 14 effector
                     protein like; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:685394"
                     /db_xref="RGD:1595054"
     CDS             208..666
                     /gene="Arl14epl"
                     /codon_start=1
                     /product="ARL14 effector protein-like"
                     /protein_id="XP_006254763.1"
                     /db_xref="GeneID:685394"
                     /db_xref="RGD:1595054"
                     /translation="MTEPSHKNNSTQEERTNHVFPEKSSQIGQKQLQQIERQLKCLAF
                     QNPGPQVADFNPETRQQKKKARMSKMNEYFSVKYKVMKKYDKNGRLICNDVDLCDCLE
                     KNCLGCFYPCPKCNSNKCGPECRCNRRWVYDAIVTESGEVISTLPFSVPD"
ORIGIN      
        1 actaggcaac agagttatgt cccacactaa agcaaaggtc cagcccaagt gcacactctt
       61 ttcttgagac tctcttgcat cagtaagggt tggattagga actcagatac ctgtctgctc
      121 tctgagaact caacgtaagg gattagtaga ggagagctga aatggcaaag accaacggac
      181 gaagcgagag gataacatgt tgtcaaaatg accgaaccat cacataagaa caactctact
      241 caagaggagc gcacaaacca tgtgtttcca gagaaaagca gtcagattgg acagaagcaa
      301 ctgcaacaga tagaacggca gctaaagtgc ttggcatttc aaaaccctgg acctcaggtg
      361 gcagatttta accccgagac gaggcagcag aaaaagaaag cacgaatgtc gaagatgaat
      421 gagtattttt ctgtgaagta caaggtgatg aagaagtacg acaaaaatgg caggctgatc
      481 tgtaacgatg tggacttgtg tgactgcctg gagaagaact gcctgggatg cttctacccg
      541 tgtcccaagt gcaactccaa caagtgtggg ccggagtgcc ggtgcaaccg gcgctgggtc
      601 tatgatgcta tcgtcaccga gtctggcgag gtcatcagca ccctgccatt tagtgttcca
      661 gactaggaga tgatatgcgt agattctcat tatttctctc tcgcccctcc accccgccct
      721 gcgtgtgtgt gtacgtgtgt gtgtgtactt gtttgttttg agacagggtc ttatctgtgc
      781 tggccttgaa cttatggcaa tcctcctgcc tcagcttccc aagttgtatt catttaggta
      841 tattacatca cacctggctt ctgtttctta tacatatata catacatata taatatattg
      901 cataatatat atatatttaa gtcaaacttc tttcttttgg ataagtgtta gtgtttaggc
      961 aaaatattat ctcaggctac cgatggctgt agaatggatg atgattgtgt agaccctctc
     1021 agcttcctca gctcatggcc aaaggctgca agagtggacg accagtctcc ctcactggca
     1081 gaactctctg ccttaaagtc acctctccct tctcagggtg tctggttgag aactccatag
     1141 ttttaagatt tgcacaactc tgcatctgaa agctgttacc tagaacatac aaccaaatgt
     1201 atgtctttct tagaatgtca tatattacta agaaaagcaa gcttgtgcct ttgtactata
     1261 tatctttagt cttatttttt tattgtttat attttgaggt taaacttaaa tttggtgatg
     1321 ataatatttt tattaccaaa catttatatt ttactaaatt atatgttagt tgactaaact
     1381 gagaagcaaa gacttgaatg tgctaaaagt cagtgattaa cacatttcct tacaagatca
     1441 gtatttcagg actttttttt aaaaggaagt tagccttaaa tgatactcag tggcttgcat
     1501 gtttactagt tggatggatg gatgagcagc tgactgaaag catgatgtgg gtatctccat
     1561 tctaatatac tgtagcaggt gtctggaaag ttgaattcag ccttctatga acaaatttgt
     1621 gtctctctct gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgc
     1681 tcgagtgcgt tcatgtacct gcagaggcca gagatattgg cttctttgga gcttgagtta
     1741 ctgactttta tgaaccactt gaaatcagtg ctgggaacca aacccaggtc ctttgcaaga
     1801 gcagtgtgtg ctttaaatgt ctgaaccatt tctccaacgc caaacctgtt actttccccc
     1861 atcttaagtc agagtttctc ttatgttcat tgtctggaag gttctcaaat cctcagtcac
     1921 taacttaaga tgtgtactgt gactcaattt acatttgaaa caaattccca ggtgatgctg
     1981 atgtcacaga cctgggggcc atgtattaaa acatatatga aaagcacttc tctaaattac
     2041 attaagatat gtaatgaaaa gaagtgtcta aacactgggg cttaatgact tggtactatt
     2101 ttaaacctaa atatcttgtt ttaaataaat gtgtgaagtg ttgaaagctg gattttcagg
     2161 gtttcttttt ccctctgtaa accatcaaaa gacttatttc tgtacaatct acatttgttt
     2221 gcaattctga cagtctgttt tgacatgaaa atcccaaaga ttttactgtg gctttgaatt
     2281 cctgtccaca taacaagaat ctatatcctc ctgcactatt tcccacagtt tgccggcttt
     2341 tatgggttct agtttttttg tggctgcatg ttgaacccag ggctttgtgc atgcacagta
     2401 atgctcattg ctgagctaca ctggaaaccc tcaagtctct ttggatcgtc cacactgtga
     2461 gccaaacact atgccaagtt tctatgtttg tgacctttag ctatcacagc cctgagagga
     2521 agataaaaag tgaaatcacc caagtcacat ggtttgaaag ctcactgagc ttgttgttgc
     2581 cccaagggta gctaaaaatg tggaggccct ttccatttga tttattgtct aaatagtgga
     2641 cctgatacac tgttttatga cttattcatc tttgaactgt gtaatgtttc agctcatggg
     2701 aaaggtaaga tgggaaacac agagaaggta gttatgccag acattgagct agatgctgga
     2761 gacagagcag caaccaaaat ctaccttctc tctaccttca tggagtttat gggcttaaac
     2821 caagccattt tcatttttgt ttcttttcat tctgcctttg caactgagta aatgtggccc
     2881 caattaagtt ggccccagtg aggaatcact aaaaagctag caaccctggt attgtttgag
     2941 ttagaatttt atgtagcaca ggcagaccta gaactcccta catggctgag gatggcccca
     3001 actttcagat acttttgcct ctacctccta agagctggta ttaaaagtct gtattactat
     3061 gctgtgctaa aaatggaacc caaggccttg tgcatgctcg catgccctct tccagctatg
     3121 ctatgtatac tccaagccca gccctgatct taacaccttc cttggtaagg tgcaaagttg
     3181 gctagtctgt aattacatgt aggtactttt agtaacattc tgaaa
//
