LOCUS       NM_001024366            1678 bp    mRNA    linear   ROD 12-NOV-2024
DEFINITION  Rattus norvegicus ARF like GTPase 13A (Arl13a), mRNA.
ACCESSION   NM_001024366 XM_577016
VERSION     NM_001024366.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079325.1.
            
            On May 27, 2005 this sequence version replaced XM_577016.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079325.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq32"
     gene            1..1678
                     /gene="Arl13a"
                     /note="ARF like GTPase 13A"
                     /db_xref="GeneID:501617"
                     /db_xref="RGD:1562947"
     exon            1..132
                     /gene="Arl13a"
                     /inference="alignment:Splign:2.1.0"
     exon            133..213
                     /gene="Arl13a"
                     /inference="alignment:Splign:2.1.0"
     CDS             155..1342
                     /gene="Arl13a"
                     /note="ADP-ribosylation factor-like 13A; ADP ribosylation
                     factor like GTPase 13A"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein 13A"
                     /protein_id="NP_001019537.1"
                     /db_xref="GeneID:501617"
                     /db_xref="RGD:1562947"
                     /translation="MFRLLTACWSRQKATEGKQRNVTIIVIGLDNSGKSHLVAAFQRL
                     IPSKMHSEMRPTQTTLLLDDYQVSVYDLTGDLKGREKWPNYYAEAHGLVFVVDSSDIA
                     RIQEVKIILTRLMFDKRVSGKPILILANKQDKKDALLPCDIIEYLLLERLVNETKSMC
                     RVEPCSTIRNLPKRHQQPIVIGLRWLLAAIGDRYDELCTRHQTPSMSNISSSKNIRGC
                     GERCSSDSLSTRGVGVVRNNHRQHFEKRQHLEHRQHVEQRHFEKRQHFESRQHLIQRS
                     LDARPLKPILQKDGFRIRPKKNMSVTFALDVIMEEGECSRKIGAPNISKPCNSQCYDT
                     KTPAPSADANLFKARRPKKRIETWDTEEMFLEDPRGEAFRSCVTGHSSRSSRNTQSLY
                     FTG"
     exon            214..284
                     /gene="Arl13a"
                     /inference="alignment:Splign:2.1.0"
     exon            285..534
                     /gene="Arl13a"
                     /inference="alignment:Splign:2.1.0"
     exon            535..640
                     /gene="Arl13a"
                     /inference="alignment:Splign:2.1.0"
     exon            641..831
                     /gene="Arl13a"
                     /inference="alignment:Splign:2.1.0"
     exon            832..1015
                     /gene="Arl13a"
                     /inference="alignment:Splign:2.1.0"
     exon            1016..1196
                     /gene="Arl13a"
                     /inference="alignment:Splign:2.1.0"
     exon            1197..1283
                     /gene="Arl13a"
                     /inference="alignment:Splign:2.1.0"
     exon            1284..1654
                     /gene="Arl13a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tggacatctg ggctggttta atcgatccag aaggctaaaa agctcaacaa atctttctga
       61 aattcaacac ggcaaacatt ttttcagcca aaacaccaac ttgtcgtcag ttaaatagtt
      121 aaccacctcc agtagttaag aaccaagttg catcatgttc cgacttttga ctgcctgctg
      181 gtctcgtcag aaggccacag aaggaaaaca aaggaatgtg actatcattg tcattggctt
      241 ggacaactct ggcaaaagtc atcttgtagc ggcctttcaa agattaattc ctagcaagat
      301 gcacagtgaa atgagaccaa cacaaacaac acttctacta gatgattatc aagtatctgt
      361 ctatgaccta actggagacc taaagggccg tgaaaaatgg ccaaactact atgctgaggc
      421 acatgggctt gttttcgtcg tggattctag tgacatagca cgtatacagg aagtgaagat
      481 catcttaact cgcctaatgt ttgacaaaag ggtatcaggg aaacccatct taatcctggc
      541 aaacaaacaa gacaagaagg atgcactttt gccttgtgat atcattgagt atctccttct
      601 ggaaagacta gtgaatgaga ctaagtctat gtgccgagtg gagccatgct caaccataag
      661 aaaccttcca aagaggcacc aacagccaat agttataggg ctgcgctggc tattagctgc
      721 cattggggat cgatatgatg agctgtgcac tcgacatcaa acacctagta tgagcaacat
      781 ctcaagctcc aagaacatca gaggctgtgg agaaagatgc tcatcagaca gcttatctac
      841 cagaggagtg ggtgtggtca gaaacaacca cagacagcat tttgagaaaa gacaacacct
      901 agagcataga cagcatgtag agcaaagaca ttttgagaaa agacagcatt ttgagtcaag
      961 acagcactta attcaacgct cactggatgc taggccccta aagccaattt tgcagaaaga
     1021 tggttttcga ataagaccca aaaagaatat gtcagtaaca tttgctctgg acgtaatcat
     1081 ggaggaaggt gaatgttctc ggaagattgg agctccaaat atcagtaagc cttgcaatag
     1141 tcagtgttat gatacaaaga ctccagctcc atctgctgat gccaatcttt ttaaagcccg
     1201 gagacccaaa aagagaatag aaacctggga cactgaagaa atgtttttgg aagaccctcg
     1261 tggagaagcc ttccgttcct gtgtaactgg gcacagctcc agaagcagca ggaacaccca
     1321 gtctttgtat ttcactggat aacacctctg cagtccacga acaagttcac ctatctaaca
     1381 tcacatccct gagaaccatt gtttctgcac accagtaagt tcatccatac tcaccgagtg
     1441 cctcaggaag ttaggtgctg tccatctgag caaagaacaa cagagacttc ccatttgtaa
     1501 tgagatgctc ctgacaaagc ttatggatca agtgtcgtgc acaactgaaa atgagcctta
     1561 gacgaacagg gttactttag aatcacacgt ttctcgttac ggttctcggg tataaagggc
     1621 ctggcaaaat aaataagaat gatgctctac tcaaaaaaaa aaaaaaaaaa aaaaaaaa
//
