LOCUS       NM_001107374            5163 bp    mRNA    linear   ROD 26-APR-2024
DEFINITION  Rattus norvegicus arkadia (RNF111) N-terminal like PKA signaling
            regulator 2N (Ark2n), mRNA.
ACCESSION   NM_001107374 XM_001055958 XM_039096775 XM_225699
VERSION     NM_001107374.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5163)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On or before Apr 7, 2023 this sequence version replaced
            XM_039096775.1, NM_001107374.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR21887620.1212358.1,
                                           SRR21887622.632060.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-271               JAXUCZ010000018.1  73517874-73518144   c
            272-1055            JAXUCZ010000018.1  73477058-73477841   c
            1056-1223           JAXUCZ010000018.1  73455436-73455603   c
            1224-1350           JAXUCZ010000018.1  73444022-73444148   c
            1351-5163           JAXUCZ010000018.1  73431104-73434916   c
FEATURES             Location/Qualifiers
     source          1..5163
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q12.3"
     gene            1..5163
                     /gene="Ark2n"
                     /gene_synonym="RGD1308601"
                     /note="arkadia (RNF111) N-terminal like PKA signaling
                     regulator 2N"
                     /db_xref="GeneID:307249"
                     /db_xref="RGD:1308601"
     exon            1..271
                     /gene="Ark2n"
                     /gene_synonym="RGD1308601"
                     /inference="alignment:Splign:2.1.0"
     exon            272..1055
                     /gene="Ark2n"
                     /gene_synonym="RGD1308601"
                     /inference="alignment:Splign:2.1.0"
     CDS             341..1540
                     /gene="Ark2n"
                     /gene_synonym="RGD1308601"
                     /note="uncharacterized protein C18orf25 homolog; arkadia
                     N-terminal like PKA signaling regulator 2N"
                     /codon_start=1
                     /product="protein ARK2N"
                     /protein_id="NP_001100844.1"
                     /db_xref="GeneID:307249"
                     /db_xref="RGD:1308601"
                     /translation="MKMEEAVGKVEELTESAAPPKASEQETVKEEDGSVELESQVPKD
                     GGAGSTVLSSMPCLLMELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGH
                     LADSDTLSSVEENEPSQAETTVEGDTSGVPGATVGRKSRRSRSESETSTMAAKKNRQS
                     SDKQNGRVTKVKGHRSQKHKERIRLLRQKREAAARKKYSLLQDSSTSDSDLTCDSSTS
                     SSDDEEEVSGSSKTITAEIPDGPPVVAHYDMSDTSSDPEVINVDNLLAAAVVQEHSNS
                     VGGQDTGATWRTSELLEAGHLDPGFLASDKTSVGSAPLNEEINIASSDSEVEIVGVQE
                     HARCAHPRGGVIQSVSSWKHGSGTQYVGSRPTQSWTAVTPQQTWASPAEVVDLTLDED
                     GRRKYLL"
     exon            1056..1223
                     /gene="Ark2n"
                     /gene_synonym="RGD1308601"
                     /inference="alignment:Splign:2.1.0"
     exon            1224..1350
                     /gene="Ark2n"
                     /gene_synonym="RGD1308601"
                     /inference="alignment:Splign:2.1.0"
     exon            1351..5163
                     /gene="Ark2n"
                     /gene_synonym="RGD1308601"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcggaacgg cctctggtga cattttcttg gggcggcgcg gacgactgaa gggaattggt
       61 gttggaggct gcggaggcgg cgagctctac tctgccccgc tgcaggggct ccagccgcgc
      121 tcctctgctc gccgctggga gttgtctgag gagaaagggg gcggcggggc cgccgcggcc
      181 cgaatctgcg gcccgtcagc gccgcccggg tgggcgcgtg ccccgacggg gcgcgcgggg
      241 ccggcgagga ggcacggacg gcggggcgca ggctgctttc cagtgcatct ttgatatcgt
      301 ttcctagact ctgttccatg atttaatctg gagttctgag atgaagatgg aggaggcagt
      361 gggaaaagta gaagaactca ctgagtctgc agccccacca aaagcatcgg aacaagagac
      421 agtcaaggag gaagatggct ctgtagaact ggagtctcaa gttcctaaag acggtggagc
      481 cggctctaca gttctctctt caatgccctg tttgttgatg gaactgagaa gggactcctc
      541 agagtcccag ttagcatcca cagagagtga caagcccacg actggccgag tttatgagag
      601 tgactcctct aatcattgca tgctttcccc ttcctctagt ggccacttgg ccgattcaga
      661 tacattgtct tctgttgaag agaatgagcc ctcgcaagca gaaacaacag tagaaggaga
      721 tacttcagga gtgcctggtg ccactgttgg acgaaagtct aggcggtccc gttccgaaag
      781 cgaaacatct accatggctg ccaagaagaa ccggcaatcc agtgataagc agaatggccg
      841 agtcaccaag gttaaaggtc atcggagcca aaagcacaag gaaaggatca gactactgag
      901 gcagaagcgg gaggctgctg caaggaagaa gtacagcctg ctgcaggaca gcagcaccag
      961 tgacagtgac ctgacgtgtg actccagcac cagttcgtca gatgatgagg aagaggtttc
     1021 agggagcagc aagacaatca cggcagagat accagatgga cctccagttg tagctcatta
     1081 tgatatgtct gacaccagct ctgacccaga agtgataaat gtggacaatt tattggcggc
     1141 tgcagtagtc caagagcaca gtaattcagt aggcggccag gacacaggag ctacctggag
     1201 gaccagcgag cttctagagg caggtcattt ggatccagga ttcctagcaa gtgacaaaac
     1261 gtcggttggc agcgcaccgc ttaatgaaga gattaacatc gcctcttcag acagcgaagt
     1321 ggagattgtg ggtgtccagg agcatgcaag gtgtgctcac ccccgaggag gtgtgatcca
     1381 gagcgtttct tcctggaagc atggctcggg cacacagtac gtgggctccc ggccgacaca
     1441 gtcatggact gctgtgacgc cccagcagac gtgggcttcg ccagcagagg tggtcgacct
     1501 taccttggat gaggatggca ggcgtaaata ccttctgtag tggagtgcca ctgtctctgc
     1561 actggtcctt ccagccctcc tctccgtgac atggaagttc atttcatagc ttcagcttcc
     1621 taagctgttt gtggcatttg tgggatggaa attcatggta gctccccctt tttattaaaa
     1681 taattcactt aggaaaataa cagcacagag aaataatttt ttcttttcct caataacaat
     1741 atgagaatgg tggattttat tagacagctt cattttgctt ggtgatctac cttaaagtca
     1801 ccctccattt agaataatat tttacttact agacaaaatg gatttcaggt tttgaatctc
     1861 atatttattt ttctgtataa tgaaattaat atctagatgt gaccactctc tgtcacctca
     1921 ttgtcactcc tggtctcggg catttgcaca cagattagtc aagttctcct cattggcgcc
     1981 tggtagggca tgtgcattta gaaacccctt ccttagatgt ggaggacaga agtgttataa
     2041 aatatatttt tctttagctt acttcttctg ccttctttcc tgacagctcc ttgtttgcca
     2101 caacacagat atttgaaatg ccccttttat ttccaaatac tattaagggg actcagttgg
     2161 tctctttgtt gcaataattc ctaattcttg gagatttttc tggatatctg aagagtgcat
     2221 tgagagatca gtgggaaatc tgtatcttcc aacgtttccc tcctggttta ttcaaacagt
     2281 aagcagacat ggaaatctgt tactcaagta ggaaggctgt aagaggcaga gtggcatcaa
     2341 agtctgtagg cacttgcaaa tctgagcaga cagtgccttt cctcacatct ggttgctcca
     2401 gagagggtgc gaccactgtt taactggacc ccaggctgtg tttgtaagtt ttcttctctg
     2461 cctcctaaaa gtatgtattc aagagaaatc aaaatatatt gtaaggaatc ggatgcaaag
     2521 cacatcaaca gtactgtaag tcgcacagtt taaagcatta gaacaggtaa tagaaacttc
     2581 agggaattta ggaaatgcca gcggaggaac tctgtcgcat cagtactacc ctttccctat
     2641 aatgttgtag ttactagtga agtactttta aaaagcaata cctagaatta gaacacgctg
     2701 tattgtgcac agggggagtg aagtaatatt ggcctggaag acttcacgtg tttttgtttc
     2761 tgcttctgtt ttcattgtta cgtgcggtgt tgctatgtcc ttttgcctcc ctcttcaaac
     2821 gccttggtgg ttcctcctca ttacagggtg agacccgcca ttttcattca gtgcacacac
     2881 actgaccagg gatccactct gcatccagca ctgtgcaggg tcgatgctgt ggaggcctga
     2941 gaggaatgag gcacagcctg cctgcatgct cctgcatgag tctgcctggc tccatctgcc
     3001 tggcctttct ttttccttac acaaatacaa gttcactcat tcttctcctt gttaattgag
     3061 ttcttttgta gactcctcct ggagggcgtt tttgagcgcc tgcttgttga tcctttcagg
     3121 gtgtcctgcc ctctgctcac caactgctca tttccccttc agtctatggc tttactactc
     3181 actaggtttt aaaatcatga atctccagtt gtagtgcatt gatcactctc acctggccac
     3241 aatcctagat agaaaccaaa gacccagagg ccagagctaa acagagcttc tgaaaattca
     3301 ctgctggtat atctttggac tttcacatct tgctttagga ttaatttatt gagttttact
     3361 gttacacagt tttttgtttt gttttttttt tttacttgaa ttaaaatact caacaaagga
     3421 gaaacataat ttctggtctg tgttttccag aaaatcattg gtaagagaat acagtggagg
     3481 gtatgacttg aagtttttgc agcttatctc tctcttcccc agtgtcaggg cacagcccac
     3541 tttaaagaat gtttttgcat tacttatttt catgttaata atgttttgtt caagtctata
     3601 tagcaggtgg tttcccttga cattttattt agccatcccc tgtctttggg tgcactgtgg
     3661 actggggaca gaatggagtt gcagccaaac tcttttctgg ccttttatct taggttgcac
     3721 acagatactc ctgatacatg accctgacta cttgacttgg tgcaccggaa cggagagtta
     3781 gacattaata ttcaaggaag tgaaggcatg cttgaagcag tctgctctct ctagcaagta
     3841 tgggactttc ccatctgatg cctaattaag agggcagttg aactccttgg ttattactac
     3901 atctaggaga gtggaaatgt ggtttgtggc aaggtgttac aaattctgtg acatacaact
     3961 cttagaacat ttgaaatttc tctggaagta ttgtttgcta atcaaacctt tacatttggt
     4021 accataagga gttctttatg ctttgccaag acattgtgtg agggtgacag tgggatcaca
     4081 gattacctta tgccacgaat gtgattgatt ccctcccctc cagtctgaag aagcagaagc
     4141 agaagcctgg ctgtttgtca ctgtgtcggc tctgcagtta cagagcagtg gttctcactt
     4201 gtgggtcgtg actcctttgg gggtgaatgg ctctttcaca gggctgcagc attaggaagg
     4261 ttgtagactg actggatgat gtcagtggca agggattagt cctagcatgc gtttgtcagc
     4321 acagctctta gcatgacctg cccagtttgc cagctcagtc attcgttcac ctactgttag
     4381 caaactagca ccacaaggaa tttaagacag atgttgcctg cttcttttgt cattgtgtca
     4441 caaggcttgc aaaagcctgg ggcacagttt agtcttagtt ttgactcccc cccctttttt
     4501 tttttaaaaa ggcaaagagc cgaaccccaa ttcctgttgt cccatatgtg tgtgatgtga
     4561 cttccatgtg tatataaaac tattgcaccc taaccaaact tcctcagact gtgcactgtt
     4621 tgtttaaaat aatcacgtat tttagttcaa tgctgttgta ttttttcttt ttatttaaaa
     4681 cactacttat tctctaacaa atttcaaagg gtagagatct ttaaaaaaaa tcactggaaa
     4741 cgaggaaatg cgtttgttgt tgctttgttc tttaaagagt gcaaaggtcg ttggctcttt
     4801 tgctcttctt accttgaaca tgaattgtca gccattgtgt ggctaggacc cagtgcactt
     4861 ggtgttcaca gacctgctgt tgctggcctg agcgtggact tgatgcagtg acgacaaatc
     4921 attgcgtaga agtaatgttt ccaaatgtgc aactcaagtt tgtaaatgaa atttggttct
     4981 ttacatcatt atttaggttt tgtttccatt tagtatttaa tggtctttgg agaaaaaaat
     5041 aaacagagtg ttatatatat attttttggt gcaagataag attttgtttt ttgaaacaag
     5101 tctgtagcat aaaggttaaa ctattttaag ataaaataaa aatagagtgt atttaaacaa
     5161 tga
//
