LOCUS       NM_001109001            3772 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus AT-rich interaction domain 3B (Arid3b), mRNA.
ACCESSION   NM_001109001 XM_001074513 XM_345945
VERSION     NM_001109001.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3772)
  AUTHORS   Herrscher,R.F., Kaplan,M.H., Lelsz,D.L., Das,C., Scheuermann,R. and
            Tucker,P.W.
  TITLE     The immunoglobulin heavy-chain matrix-associating regions are bound
            by Bright: a B cell-specific trans-activator that describes a new
            DNA-binding protein family
  JOURNAL   Genes Dev 9 (24), 3067-3082 (1995)
   PUBMED   8543152
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473975.1.
            
            [WARNING] On Oct 10, 2024 this sequence was replaced by
            NM_001109001.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_345945.3, XM_001074513.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760389
                              [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..3772
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..3772
                     /gene="Arid3b"
                     /note="AT-rich interaction domain 3B"
                     /db_xref="GeneID:367092"
                     /db_xref="RGD:1306335"
     exon            1..605
                     /gene="Arid3b"
                     /inference="alignment:Splign:2.1.0"
     CDS             78..1775
                     /gene="Arid3b"
                     /note="AT rich interactive domain 3B (Bright like)"
                     /codon_start=1
                     /product="AT-rich interactive domain-containing protein
                     3B"
                     /protein_id="NP_001102471.1"
                     /db_xref="GeneID:367092"
                     /db_xref="RGD:1306335"
                     /translation="MEPLQQQQKQPQQTPLQMDAREKQGSHTREAQFLYAPKLGTQPA
                     LLSVTPGRPSGSPVLGPLGRVLPATPAARVSEQSNVNSEPEEEEGGLEDEDGDDDVTE
                     VAEKEAQAASKYFHMQKATRQEPRAAPMSSLLPAPGLPPQGQTKEDHTKDASKAPPSV
                     PTAGQPSWNLDEQLKQNGALAWSDDADGGRGREISRDFAKLYELDGDPERKEFLDDLF
                     IFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSI
                     TSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAA
                     AAAAAAAAAAASAASAGAPALLSPPKIRFSILGLGSSSGTNTSSPRIPPASTLRKGDG
                     VPVPVPNRLAVSGPLAGQQAGNRTGTLEQLRERLESGEPPEKKASRLSEEEQRLVQQA
                     FQRNLFSMARQLPMKIRINGREDRAETSAAALNLTTSNIGSINMSVDIDGITYTGVLF
                     AQKPVVHLIAGSAPQSIGSSASSSSSSSSSSSSSHCSPSPTSSRGTPSAEPSTSWSL"
     exon            606..677
                     /gene="Arid3b"
                     /inference="alignment:Splign:2.1.0"
     exon            678..750
                     /gene="Arid3b"
                     /inference="alignment:Splign:2.1.0"
     exon            751..934
                     /gene="Arid3b"
                     /inference="alignment:Splign:2.1.0"
     exon            935..1245
                     /gene="Arid3b"
                     /inference="alignment:Splign:2.1.0"
     exon            1246..1491
                     /gene="Arid3b"
                     /inference="alignment:Splign:2.1.0"
     exon            1492..1590
                     /gene="Arid3b"
                     /inference="alignment:Splign:2.1.0"
     exon            1591..3772
                     /gene="Arid3b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atatagagcc agtgtgcctg ctgggctgtg cccaggttga gagccatgcc agtctgtggg
       61 tgaagcctga gacagtaatg gagcctctgc agcagcagca aaagcagcca cagcagactc
      121 cgctacagat ggatgccaga gagaagcagg gatcacacac aagagaagca cagttcctgt
      181 atgccccaaa actaggcacg cagcctgctc tcctttccgt cacaccgggg agaccttctg
      241 gtagtcccgt tctgggtccc ttaggcagag ttctaccagc cacaccggcg gctcgagtgt
      301 ctgagcagag caacgtgaac tctgagcctg aggaagagga aggaggtctg gaagacgaag
      361 atggagatga tgatgttaca gaggtggctg aaaaagaggc ccaggctgct tccaaatatt
      421 tccacatgca aaaagcaact cgccaagaac ccagagcagc acccatgtcc agtctgcttc
      481 cagcacctgg gctcccacca cagggacaaa ctaaagaaga ccataccaaa gatgcttcca
      541 aggccccacc ttctgtgccc acggctgggc agccgagctg gaatctggat gagcagctta
      601 agcagaatgg tgctttggcc tggagtgacg atgctgatgg aggccgggga agagagatct
      661 ctcgagattt cgccaagctg tatgaactgg acggcgatcc tgaaaggaaa gaatttctgg
      721 atgacctctt catcttcatg cagaagagag gcaccccaat caaccggatt cccatcatgg
      781 ccaagcagat cctggacctg tatatgctat ataaactggt cacagagaaa ggcggcttgg
      841 tggagatcat caacaagaaa atctggaggg agatcaccaa aggcctgaac ctgcccacgt
      901 ccatcaccag cgctgccttc accctgagga cccagtacat gaagtatcta tatgcctatg
      961 agtgtgagaa gaaagcgttg agctccccag ccgaactaca ggctgccatc gatggcaacc
     1021 gtagggaagg tcggaggccc agctacagct cctccctctt tggttattct cctgctgctg
     1081 ctgccgccgc cgctgccgcc gccgccgctg ctagtgctgc ctctgctggg gcccctgccc
     1141 ttctctcgcc ccccaagatc cgcttctcca tccttgggct tggctccagc agtggcacca
     1201 ataccagtag ccctcggata cccccagcat ctactctcag gaaaggtgat ggagtcccag
     1261 tgcctgtgcc aaatcgcctg gctgtgtcag gacctttggc aggccagcag gctggcaacc
     1321 ggactggcac actggagcag ctacgggagc gtctggaatc aggggagccc cctgagaaga
     1381 aggcatcgag gttgtcagag gaggagcagc gcctggtgca gcaggccttt cagcgcaacc
     1441 tcttcagcat ggcgcgacag ctccccatga agatcagaat caatggcagg gaagacagag
     1501 cagagacttc agctgcagca ctgaacctga ccacaagcaa cattgggagc atcaatatgt
     1561 ctgtggatat tgatggcatc acctatacag gtgtgctttt tgcccagaaa ccagtggtcc
     1621 acctcattgc gggctctgct ccccagagca ttggcagcag cgccagcagc agcagcagca
     1681 gcagtagcag cagcagcagc tctcactgct caccaagtcc tacctcatcc cggggtaccc
     1741 ccagtgcaga gccctccacc agctggtccc tctgatgagc agcactctgc acccactccc
     1801 tactctcctg ccaagattaa aggagattga tgcacagagt ttacctcacc tcatggagcc
     1861 cacatcagac accatctggc cacatctggc caagctccat tcaggttctg ctgtattctg
     1921 ggggcaggac agagtagcgt tgtccaatca gggattgtct tggagaactg ggtggggcat
     1981 ctgggcatcc agcttcccca gggttcccca gccacctccc atcccagagt agtatatcga
     2041 caatctgtaa ggcgacatgg ggctggaggc ttttcatttc ccttccccct taatttattt
     2101 cccttctgct gccttctgcc ttcaccccag ggtcaccaga ctcttagtct gcgcagtccc
     2161 ctgtgtttaa atcccatttg gggctctagg agttaggaac ttgtcttcct tgctcttgtt
     2221 ggcatgggat gagcatggtt tgggaatgtg tcttcccagg cctcctttac tctctgggtg
     2281 tgggcttccc atatccaagt cttaaattca ttcctcaggg ccctggaata ccttttttgt
     2341 ttttcctaag aaaaaagcat gttatggctg gctttgggtt cagggcccct ctgtgtatgg
     2401 agaggaggaa gcactcatgg tgcccaggct ctgataccta tctgacaaga ctccgttctg
     2461 atcccccagc ctcggctccc tgcctgccta tgttggccaa ctcttccaat atatcactgg
     2521 tccttggccc gtaacgtcgt ctcttggggc catttcagcc ccaccagccc aagacatgct
     2581 gatgtcaggc tcactgaaat acctcagatt tgtaattgtt gatatttgat tcttcaggaa
     2641 gtatttgcat ctctgtaata ttttttaata tgtgttttac tgactttaat ttttaaattt
     2701 ttattgttgc tgttgtagca ccaaagaaat gaaagccgat caccccagcc aggtgcagtt
     2761 tgcagccacc tccctccaac ctgcccatgc cctggccagg aggtgtagca ggtagggtga
     2821 ctcagggatc accacagcag gcgaatagga tggagggacc cattcctgct ggtggatcct
     2881 gaaaccacac tggttctttc caccaccccc taccccagct gtcagggtag ggcagagtat
     2941 ctgtctgccc ttagaaccct caccatgggg cataggcaga gatggctgtg ggccccgcct
     3001 gaggctgagc ttcagggaca agaggatgct aagagctctg tctcctgctg gcatgcagct
     3061 agatcaggcc actgtggtag agaaagggtg gtccttaaac agggctccat tctcatccca
     3121 ctgtgcctca ctctgttaca taaagcatca cccataccca ccggactact tgggttgtag
     3181 cagtggagac cacggcatgg cccagcagtc ctgactagga caagaaaggg aaaagcttat
     3241 gcacatgcat acctcagcct agcaagcaca gcactgctga cttctggctc ttatccctgc
     3301 tccagggcac acattgtcag taacacacac acacagctct tacactgagg tctgaccctc
     3361 ttctgctctc agaagcctta tccacgaggc acatgcaggg ttgggcaaag gacatttggg
     3421 gaacgatgct gtgagaagct catttgacca gtgtgtctca ggatttagtc atgaaggata
     3481 gattcttcct acccagaggt gactgggaca gggctgcaag acttttctgg tcaccaaata
     3541 ctcttccctc aggcagcttg tccacctgtc cctctcaatg cccctcactg ccctcaagcc
     3601 agcagcaggc tcctagccag aaaatgcaaa agctgggtgc cttgtatgcc cagctttagg
     3661 gctatggccc aagtggcgct tcccctacag gtatagtcct ggaggccatg tggccatgtg
     3721 gttggccagg acagcgtcct ccccttctat gtcttgtatg tattctaacc ag
//
