LOCUS       XM_345867               8586 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus AT-rich interaction domain 2 (Arid2),
            mRNA.
ACCESSION   XM_345867
VERSION     XM_345867.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_345867.10.
            
            On Jan 21, 2021 this sequence version replaced XM_345867.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8586
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8586
                     /gene="Arid2"
                     /note="AT-rich interaction domain 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 55 ESTs, 4 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 184 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:366980"
                     /db_xref="RGD:1311105"
     CDS             235..5715
                     /gene="Arid2"
                     /codon_start=1
                     /product="AT-rich interactive domain-containing protein 2"
                     /protein_id="XP_345868.4"
                     /db_xref="GeneID:366980"
                     /db_xref="RGD:1311105"
                     /translation="MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKE
                     LDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEK
                     VHHFGEDDDEVPPGNPKPQLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNK
                     LVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFS
                     TVFGEEWREKTDRDFVKFWKDIVDDNEVRDLISDRNKAHEDTPGEWIWESLFHPPRKL
                     GINDIEGQRVLQIAVILRNLSFEESNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDT
                     LGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKMRGMEILGNLCKAEDNGVLIC
                     EYVDQDSYREIICHLTLPDVLLVTSTLEVLYMLTEMGDIACTKIAKVEKSIDMLVCLV
                     SMDIQMFGPDALAAVKLVEHPSSSHQVLSEMRPQAIEQVQTQSHGAPGPACRAVVAQH
                     AAPPPGIVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTG
                     FYKCLRTVFPNHTVKRVEDSSSSGQAHIHVIGVRRRALPLPIQMYYQQQPVSTPVVRV
                     DAVADVSPTPSPAGIPHGSQAVGNHFQRTPVTNQSSNLTATQMSFPVQGVHTVAQTVS
                     RIPPNPSVHTHQQQNSPVTVIQNKAPIPCEVVKATVIQNSVPQTAVPVSIAVGGPAQS
                     SLAQNHSAGPQPVTVVNSQTLLHHPSVMPQPSPLHTVVPGQIPSGTPVTVIQQTVPQS
                     HIFGRVQNIPACTSTVSQGQQLITTSPQPMHTSSQQTAAGSQPQDTVIIAPPQYVTTS
                     ASSIVSATSVQNFQVATGQVVTIAGVPSPQPSRVGFQNIAPKPLPSQHVSSTVVQQPV
                     QQPQQPAQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPTGQTVQLTGQPNITPSSS
                     PSPVPATSNQVPAAMSSSSTLQSQGPPPTVSQMLSVKRQQQQQHSPAAPAQQVQVQVQ
                     PPQVQVQVQPQQAGAGVGQPASSESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNA
                     RAPSPQVVYQVANSQAAGFGAQGQTPAQQLLVGQPNVQLVQSAMPPTGGVQTVPISNL
                     QILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNAAQLIAPAGISMSGA
                     QAGAGLQVQTLPAGQSACTSAAPPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPS
                     CRRGTTNTSNGDTSESETQVGSLLNGRKYSDSSLPPSHSGKLQSEPNPCSPLSNGPSL
                     ELGENGASGKQNSEPVDMQDVKSDLKKTLVNGICDFDKGDGSHLSKNIPNHKTCNHVG
                     NGEVSPVEPQGTLGATQQETAKGDQLERVPNGPALTLGGSPATSSVQEASSVATQPFS
                     GTDLPNGPLASGLTSDVPHQRPSVVVSPRPTAPVIQGHPVIAAPHSGSRGPASALSSD
                     ARSTNGTAECKTVKRPAEDGDREAAPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
                     DPSTVAKVAIGSAAQQKPPPPPAYAQSALPQNTPMPPSPAVQVQGQPSSSQPSPVSAS
                     SQHADPVRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQ
                     RQRFSFITHLQDKHCSKDALLAGLKQDEPGQAANQKSSTKQPTVGSTGSAPRAQKAIA
                     SHPSAALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKR
                     HENNLSVLAISNMEASSTLAKCLYELNFTVQSKEQEQDSEML"
ORIGIN      
        1 tccccctggc ctcccgctcc ctccttcccc tcctcctcgc ctcctccccc tccctcctcc
       61 ctccctgcgc cgccgccgcc gccgccgccg ccgccgccgc caccgccggc ccatgactga
      121 gccccgccac cgccggccga ggaatgggct ccgggcgctg gtagggagcg cggggagcgg
      181 gggccgcgtt tgaaccgcga tctgggtttt cgggagacct cctttggcaa aataatggca
      241 aactcgacgg ggaaggcgcc tccggacgag cggaggaagg gactggcttt cctggacgag
      301 ctgcggcagt tccaccacag cagagggtcg ccgtttaaga agatccctgc ggtgggtggg
      361 aaggagctgg atcttcacgg gctctacacc agagtcacta ctttaggcgg attcgcgaag
      421 gtttctgaga agaatcagtg gggagaaatt gttgaagagt tcaactttcc cagaagttgt
      481 tctaacgctg cctttgcttt aaaacagtat tacttgcgtt atctagaaaa gtacgagaaa
      541 gttcaccatt tcggggaaga tgatgatgag gtaccaccgg gcaatccaaa gccacagctc
      601 cctattggtg cgattccgtc ttcctacaac taccagcagc acagcgtgtc agattatcta
      661 cgtcaaagtt atgggttatc tatggatttt aattcgccaa atgattataa taaactggtg
      721 ctttcactgt tatctggact cccaaacgaa gtggacttcg ccattaatgt gtgcactctc
      781 ctctcaaacg aaagcaagca cgtcatgcag cttgaaaaag atcccaaaat catcacttta
      841 ttacttgcta atgctggggt gtttgatgac actttaggct cgttctctac tgtctttgga
      901 gaagaatggc gagagaagac tgacagagac tttgttaagt tttggaaaga cattgtggat
      961 gacaatgaag tgcgagatct catttctgac agaaacaagg ctcatgaaga tacaccagga
     1021 gaatggattt gggaatcttt atttcatcca cctcgaaagc tgggcattaa cgacatcgaa
     1081 ggacagcggg ttcttcagat tgcagtgatt ttgcgaaacc tttcctttga ggagagcaat
     1141 gttaagctct tggcagctaa tcgcacctgt cttcgtttcc tattactctc tgcacatagt
     1201 cattttattt cattaaggca attaggcctt gacacgttag gaaatattgc agctgagctt
     1261 ttactggacc ctgttgattt caaaaccact catctgatgt ttcatactgt tacgaaatgc
     1321 ctgatgtcaa gggataggtt tttaaagatg aggggcatgg aaattttggg aaatctttgc
     1381 aaagcagagg ataatggtgt tttgatttgt gaatatgtgg atcaagattc atatagagag
     1441 ataatttgtc acctcacttt gcccgatgtg ctgcttgtaa cctcaactct agaggtgctc
     1501 tacatgctca ccgaaatggg ggacattgcc tgcacaaaga tcgcaaaagt agaaaagagc
     1561 atagacatgc tcgtgtgtct ggtttccatg gacattcaga tgtttggccc tgatgcacta
     1621 gctgcagtga agcttgttga acatccaagc tccagtcacc aagttttatc tgaaatgagg
     1681 ccacaggcta tagagcaggt ccaaacccag agccacgggg cacctggccc agcttgcaga
     1741 gcagttgtag cacagcacgc cgctccccct ccaggcatcg tggaaataga cagtgagaag
     1801 ttcgcttgtc agtggctaaa tgctcatttt gaagtaaatc cagattgttc agtctctcgg
     1861 gcagaaatgt attccgagta tctctcaact tgtagtaaat tagctcgtgg tggcatcctc
     1921 acatcgactg ggttttacaa gtgtcttaga acagtttttc caaatcacac agtgaagaga
     1981 gtggaagact ccagtagcag cgggcaggca catatccacg tcataggtgt gagacggagg
     2041 gctctgccgc tgcccattca gatgtactat cagcagcagc cggtttcaac tcccgttgtt
     2101 cgagtcgatg ctgttgctga cgtgtctcca actccttcac ctgcaggaat ccctcacgga
     2161 tcacaagctg tgggaaatca ttttcagagg actcctgtca ccaatcaatc ttcaaatttg
     2221 actgcaacac aaatgtcttt tccagtacaa ggcgttcata ctgtggcaca gactgtttct
     2281 agaattccac cgaatccttc agttcatacc caccagcaac aaaattctcc agtgactgtc
     2341 attcagaata aagctccaat tccctgtgaa gtcgttaagg caacagtaat ccagaactct
     2401 gtcccccaga cagcagttcc tgtgagtatc gctgttggag gacctgcaca gagctcttta
     2461 gctcagaatc atagtgcagg gccacagcct gttacagttg taaattctca gacattgctt
     2521 caccatccct ctgtgatgcc acagccatct ccactacaca cagtggtgcc aggacagatc
     2581 ccgtcaggaa ctcctgtcac agtaatccag caaactgtac cacagagtca tatatttgga
     2641 cgagtacaga acataccagc atgtacgtcc acagtttcac agggtcagca gttaatcacc
     2701 acgtcaccac agcctatgca cacgtcatct caacagacag cagctggtag ccagccacag
     2761 gacactgtca tcatagcacc tccacagtac gtaacaactt ctgcatccag tatcgtctca
     2821 gcaacttcag tacagaattt ccaggtagct acgggacagg tagttaccat agctggtgtt
     2881 ccaagtccac aaccctccag ggtgggattc cagaacattg cacccaagcc gcttccttct
     2941 cagcacgttt catcgacagt ggtacagcag cctgttcaac aaccacagca gccagcccag
     3001 caaagcgtag tgatcgtaag ccagccagct cagcaaggcc agacttacgc accagccatt
     3061 caccaaattg ttcttgctaa cccggcagct ctcccaactg gtcagacagt tcagctgact
     3121 ggacaaccaa acataactcc atcttcttca ccatcacctg tcccagctac tagtaaccaa
     3181 gtccctgcgg ccatgtcatc ttcttccacc cttcagtcac agggaccccc tcctactgtc
     3241 agtcagatgc tgtctgtgaa gaggcagcag cagcagcagc attcaccagc ggcgccagca
     3301 cagcaggtcc aggtccaggt gcagccgccg caagtccagg tgcaagtgca gccccagcag
     3361 gcgggtgcag gagttggtca gcccgcttcc agcgagtcta gtctgataaa acagctgctg
     3421 ctcccaaagc ggggcccttc caccccaggg ggtaagctta tcctcccagc cccacagatt
     3481 cctcccccta acaatgccag agcccccagc ccccaggtgg tctatcaggt ggccaatagc
     3541 caagcagctg gctttggcgc gcaggggcag acccctgctc agcagctgct ggttggacag
     3601 ccaaatgttc agttggtcca aagtgcaatg ccacccacgg ggggagtgca aactgtgccc
     3661 atttccaact tacaaatact gccgggtcca ctgatctcaa acagcccagc aaccattttc
     3721 caagggactt ccggcaacca ggtaactata acagttgtgc caaataccag ttttgcaact
     3781 gcgactgtga gtcagggaaa cgcagctcag ctcatcgctc cagccggtat tagcatgagt
     3841 ggggcgcagg ccggagctgg acttcaggtg cagacgcttc cagccggaca gtcagcgtgt
     3901 accagcgctg cccccccatt caaaggcgat aagatcattt gccaaaagga ggaggaggca
     3961 aaggaagcaa caggtctaca tgttcatgag cggaaaatcg aggtcatgga gaatccttcc
     4021 tgccgacgag gaaccacgaa caccagcaat ggggacacga gtgagagtga gacccaggtg
     4081 gggagcctgt taaacgggag aaagtacagt gactcaagtc tacctccttc acactcaggg
     4141 aaacttcaga gtgagcccaa cccgtgctca ccactcagca atgggccatc gttggaatta
     4201 ggtgagaatg gagcatctgg aaaacagaac tcagaaccag tggacatgca ggatgtcaaa
     4261 agtgatctga aaaaaaccct tgttaatgga atctgtgatt ttgataaagg agatggttct
     4321 catttaagca aaaacattcc aaatcacaaa acttgtaatc atgtaggaaa cggtgaggta
     4381 tctccagtgg agccacaggg gactttgggt gccacccagc aagagactgc caaaggcgac
     4441 cagctagaaa gagttcccaa tggacccgcg ttaactctgg gtgggtcacc ggccaccagc
     4501 agtgtgcaag aagcttcgag tgtggcgaca cagccattca gtggtactga cttgcctaac
     4561 ggacctctag cttcaggttt gacttcagat gtgcctcatc agcgcccaag tgtggttgtc
     4621 tcaccgcgtc ctacagcccc tgtcatacag gggcacccgg tcatagcagc tccccactca
     4681 ggatctagag ggcccgcctc cgctctgtca tctgacgctc ggtctacaaa cggcacagcc
     4741 gagtgcaaaa ctgtgaagag gccagcagag gatggcgata gggaagcagc cccgggaatt
     4801 ccaaataaag taggggtcag aattgtcaca atcagcgacc ccaacaatgc tggctgcagt
     4861 gccaccatgg tggctgtccc agcaggcgcc gacccgagca ctgtagctaa agtagcaata
     4921 ggaagcgcag ctcagcagaa gccgccgccg ccgccagcct acgcgcagag cgcgctccca
     4981 cagaacactc ctatgccacc ttcaccagct gttcaggtgc agggccagcc tagcagttct
     5041 cagccttctc cagtcagtgc gtccagtcag catgcagatc cagtgagaaa acctgggcag
     5101 aacttcatgt gtctgtggca gtcttgtaaa aagtggtttc agacgccgtc acaagtgttc
     5161 taccacgcgg ccactgaaca tggagggaag gatgtgtacc cggggcagtg cctctgggaa
     5221 ggctgcgagc ccttccagcg gcaaaggttc tcgttcatca cccacttaca ggacaagcac
     5281 tgttcaaagg acgctctgct tgcagggtta aaacaagatg aaccaggaca agcggcaaat
     5341 caaaaatctt ctaccaagca gcccactgtg gggagcacag gctctgctcc cagagcccag
     5401 aaggccattg caagccaccc cagtgctgca ctcatggctc tgcggagagg ctcgaggaac
     5461 cttgtcttcc gggactttac agatgaaaaa gagggaccaa taactaaaca catccgacta
     5521 acagctgcct taatattaaa aaatattggt aaatactcag agtgtgggcg cagattgtta
     5581 aaaagacatg aaaacaactt atcagtgcta gccattagta acatggaggc ttcctctacc
     5641 cttgccaaat gcctttatga acttaatttt acagttcaga gtaaagaaca agaacaagac
     5701 tcagaaatgc tgtagtgaat cctaccccac tgacacagtg ggggctcaaa gtcaaacaca
     5761 tttcactgtt actgaagaaa gcaccaagtc ttaatggagc agagaccata gaatgaatta
     5821 ttttgtgtcc tcccatgatg ctgagaggaa gcttcgtatt ctgatctctg aacgaatccc
     5881 tttcttttct gttaaaaaaa aatctaaaaa ggaaaaaaaa aaaaaacaaa caaactgctg
     5941 tgggattgac aaccagccta tctgcaggat gtctcgggtc tggccaatcc tgatggaaac
     6001 tggtgtgatc agaattctgt accatccaca ttggaatata catggaatag tgtaaaacct
     6061 acgtgagcag atgaaataga agcattaaat atttttatct atatccaaaa aggagcacat
     6121 ttttatattt acagaaccat ttaagctggt ttgaataacg acgacaaagt ttgagcacac
     6181 ctatccccca gcttcggagg ggccaccagt atctagctgt ggattgtgtg ttttgtttag
     6241 aatcagtagc ttggttttct tacttgagcc aatatatttt cacttattta ttatcataaa
     6301 aatttaccag tctgaataga tcttgtaaat atttgtgaat agaatgaaca ccgttcatac
     6361 cactgcagcc actggaaatc attctgtggt gtcctggaag cattatcggt aggctctaaa
     6421 gttttctaga ctttgctgtc acctgtaatt gtgatgtatt ctaggcagtg gtggacactc
     6481 ttacatttgt gtaaatactt ctgcagaggt actgatgctg taaagtcaac agttttgtgg
     6541 aactgtgatt tttttttccc cctccttttt ttggtttcct tggatcccac tcccttgggt
     6601 ggggtttttt tgggtttttt tgtttgtttt gttttgtatt atacaccttg tagaactcat
     6661 tttgctggct gaaagagtat ggaataatat atctcatgtc atttttgtag aagaaaaact
     6721 atttgaattt ttttttgttt ggttttccct cccatgtatc cactgtaagc atttgtcatg
     6781 tgcaagctca gagcttgtgc agaatttttt gtatttgtaa attggtttaa atacatggaa
     6841 ttttatacag gttttctcct gtgttatata tgcattatgt gcaggtatga tattttcttc
     6901 actacttttt ctatcttaat atagtgtgga attttattgt attattcttc cattcttaat
     6961 actgtaccac attcctgctc aaaaactgct cacttcctta aattgtcttt tttcccccta
     7021 agcgtgaaat gtatccactt ataactgcct attgcctgtt ctattagcat ccaaaaatgt
     7081 ggaaggcctc ccaacaacca tttctgctgt gtccttagga tgtgcagtaa aaaatataga
     7141 cctgacagtt tatgttatag aatggcttta tttactttgg tgactgttta tagtttttaa
     7201 ataaaagact gaacattttc ttgagtcctt tatttctgag tatgcttaag acattgtaaa
     7261 atttaaagtc tagctgaagg caaagtcaaa cggtcacctc ctttatactt tgtgataata
     7321 ttgtagagag cagaaaggtg catcagatga catacaccat ggtcatggca ggaaaaccaa
     7381 actttttgtt tacgatattt aggagcagta agcccagtga gagacagttc agagctcagc
     7441 tgccttaccc ttgtgtcagc atctgactga agcttttctt taccatttga ctgtaggttg
     7501 aattcagagg cagatttttt aatgagcttc agtctggaca tacattttca gcatcttgat
     7561 tcactaatta ttacctgaag taatttctcc ccaaggggcc tctgcctgtg tactcggctc
     7621 tatctgtaaa acgatgtgtg gaaacaccca aaactcggta ttctcaggtt gttggcattg
     7681 acttcttcac cttagactgg ggctgcccag cagacagcct gggtccagat accttattat
     7741 atcccgcaaa tatttccaga ctaaaggttc ctaagggcag atggtggcag acatttatat
     7801 tcactgtgtt tatctaaaaa atttgaggct ttctgaaata atttttgtaa catcactgtt
     7861 tgcttctctt caaggtacct tttacctttc aaagcaggaa attaccacgg tggttaactt
     7921 ttagtagcag aaacaacagg cttaaagtga tttccacagt caccatcttg tcacctcact
     7981 gaattgcatc ctgtagttgt aggttttgtg ttaaaatgta taaatgtgtc tttagtgctt
     8041 ttaagcaatg gtctcagcag aattttctca atgtacttga cctgaggaaa ccaatttcta
     8101 gcttccctct taggctttcc ctccgacagc tttacctgac tagcggacta acacggactt
     8161 ggtgggtgac gcagctgaag tgcccttgag tccaggtcct gcagaaccct cagtcatgaa
     8221 aaggtgctcc gtgctagaca gaaacttgct gacttccagt attgttattt ttgtctaaag
     8281 ttgtgtaaat acaagctttg atgttatctt tgagaaatct atgtaaataa tagtcaacaa
     8341 catagactgt acaattctgt gttatatatg tgcctagtgc tctgttggca cttaataaat
     8401 tttaagtaac aaaactgatg atcatatagt gaaggcatat ttttcttccg acttgacagg
     8461 atatgactat atattaatga gactcaataa accaagccac acatgaaaac ttgtctcatt
     8521 actttatagc catgccatgt atgtttttta aaccataaat gacaataaaa gtgatttttg
     8581 aaatga
//
