LOCUS       XM_039093893            4507 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Rho GTPase activating protein 33
            (Arhgap33), transcript variant X1, mRNA.
ACCESSION   XM_039093893
VERSION     XM_039093893.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093893.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4507
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4507
                     /gene="Arhgap33"
                     /note="Rho GTPase activating protein 33; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 3 long SRA reads, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 133 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100362311"
                     /db_xref="RGD:2318374"
     CDS             77..4141
                     /gene="Arhgap33"
                     /codon_start=1
                     /product="rho GTPase-activating protein 33 isoform X1"
                     /protein_id="XP_038949821.1"
                     /db_xref="GeneID:100362311"
                     /db_xref="RGD:2318374"
                     /translation="MGRASACPLARPSWGARQSPPAAVRGGACGRPRAPHALPFVSPW
                     RRRRRQRGLRTRARKPSGSEEATATMVARSTDSLDGPGESSVQPVPPTGGPGTKGKPG
                     KRLSAPRGPFPRLADCAHFHYENVDFGHIQLLLSPEREGPSLSGENELVFGVQVTCQG
                     RSWPVLRSYDDFRSLDAHLHRCIFDRRFSCLPELPPPPEGARAAQMLVPLLLQYLETL
                     SGLVDSNLNCGPVLTWMELDNHGRRLLLSEEASLNIPAVAAAHVVKRYTAQAPDELSF
                     EVGDIVSVIDMPPTEDRSWWRGKRGFQVGFFPSECVELFTERPGPGLKADAEGPLCGI
                     PAPQGISSLTSAVPRPRGKLAGLLRTFMRSRPSRQRLRQRGILRQRVFGCDLGEHLSN
                     SGQDVPQVLRCCSEFIEAHGVVDGIYRLSGVSSNIQRLRHEFDSERIPELSGPAFLQD
                     IHSVSSLCKLYFRELPNPLLTYQLYGKFSEAMSVPGEEERLVRVHDVIQQLPPPHYRT
                     LEYLLRHLARMARHSANTSMHARNLAIVWAPNLLRSMELESVGLGGAAAFREVRVQSV
                     VVEFLLTHVEVLFSDTFTSAGLDPAGRCLLPRPKSLAGSSPSTRLLTLEEAQARTQGR
                     LGTPTEPTTPKTPASPVERRKRERVEKQRKPGGSSWKTFFALGRGPSIPRKKPLPWLS
                     GSRAPPQPSGSRPDTVTLRSAKSEESLSSQASGAGLQRLHRLRRPHSSSDAFPVGPAP
                     AGSCESLSSSSSSSSSSSSSSSSESSAAGLGPLSGSPSHRTSAWLDDGDELDFSPPRC
                     LEGLRGLDFDPLTFRCSSPTPGDPAPPASPAPPASASAFPPRATPQALSPHGPKPASP
                     TALDISEPLAVSVPPAVLELLGAGGAPASATPTPALSPNPGLRPHLIPLLLHGAEAQL
                     SDTCQQEISSKLAPTRGAPGQHSPGGMDSPLLPPALSLLRPGGAPPPPPKNPARLMAL
                     ALAERAQQVAEQQSQQGQGGTPPAPLSPFRRSLSLEVGGEPVGTSGSGLHPPSLAHPG
                     AWAPGPTPYLPRQQSDGSLVRSQRPLGTSRRGPRGPSQVSAHLRASGAYRDTPEMAAQ
                     SPCSIPSQGSNPSFLSTPRECLPSFLGVPKQGLYSLGPPSFPPNSPAPVWRNSLGAPP
                     ALDRGENLYYEIGVGEGTYSGPSRSWSPFHSMPPDRLNASYGMLGQSPPLHRSPDFLL
                     NYPPPPSCFPPDPLTHSVSQHLARRPTRPEPLYVNLALGPRGPSPASSSSSSPPAHPR
                     SRSDPGPPVPRLPQKQRAPWGPHNPHRVPGPWGSPEPFLLYRAAPPSYGRGGEVRGSL
                     YRNGGHRGEGAGPPPPYPTPSWSLNSEGQTRSYC"
ORIGIN      
        1 aagtagagca gcactcaaag ccagtaagca gccgccttgt gggcggagcg taacgctcag
       61 gccaaaattg gagccaatgg gaagggcctc cgcgtgccca ctggcccgcc cctcatgggg
      121 cgcgcgccag agccccccgg cagccgttag gggcggagcc tgcggccgcc cgcgcgcgcc
      181 tcacgccctc ccctttgtgt caccatggcg gcggcggcgg cggcagcgag gactacgaac
      241 gagggctcga aagccgtcgg ggtctgagga ggctaccgcg accatggtgg cccgaagcac
      301 tgacagcctg gatggcccag gggagagctc agtgcagcct gtacccccga ctggggggcc
      361 aggtaccaag gggaagcctg ggaagaggct ctcagctcct cgaggccctt ttccccggct
      421 ggctgactgt gcccatttcc actatgagaa tgttgatttt ggccacattc agctcctact
      481 gtctccagag cgtgaaggcc ccagcctctc tggagaaaat gagctggtct ttggggtaca
      541 ggtgacctgt cagggccgct cctggccagt tctccggagc tatgatgatt tccggtctct
      601 ggatgcccat ctccaccggt gcatatttga ccggaggttt tcttgcctcc cagagctccc
      661 tccacctcca gagggtgcca gggctgccca gatgctggta ccactgctgc tgcagtacct
      721 ggagaccctg tcagggctcg tggacagcaa cctcaactgc gggcctgtac tcacttggat
      781 ggagctggac aaccacggcc ggcgcctgct cctcagtgaa gaagcctccc tcaatatccc
      841 tgccgtggct gctgcccacg tggtcaagcg gtacactgcc caggcgccag atgagctgtc
      901 ctttgaggtg ggagacatcg tctcagtgat cgacatgcca cctacggagg atcggagttg
      961 gtggcggggc aaacggggct tccaggttgg gttcttcccc agtgagtgtg tggaactctt
     1021 cacagagagg ccagggcctg gcctaaaggc agatgctgag ggtcccctgt gtggcatccc
     1081 agctccccag gggatttctt ctctgacctc agctgtgccc cggccacgtg ggaagctggc
     1141 aggactcctc cgtaccttca tgcgctctcg tccctcccgc cagcggctgc gccaacgggg
     1201 aatcctgcgc cagagggtat ttggttgtga tcttggagag cacctcagca actcaggcca
     1261 agatgtgccc caagtgctgc gctgctgctc tgagtttatt gaggcccatg gtgtggtgga
     1321 tggaatctac cgactctcag gggtatcctc caacattcag aggcttcggc atgagtttga
     1381 tagcgagagg atccctgagc tgtctggccc tgccttccta caagacatcc acagtgtgtc
     1441 ctccctctgc aagctctact tccgggaact gcccaacccc ttgctcacct atcagctcta
     1501 tgggaagttc agtgaggcta tgtcagtgcc tggggaggaa gaacgcctgg tgcgagtaca
     1561 tgacgtcatc cagcagctgc ctccaccaca ctacaggacc ctggagtacc tgctgaggca
     1621 cctggcccgc atggcaagac acagtgctaa caccagcatg cacgcccgca atctggccat
     1681 tgtctgggca cccaacctgc tacggtctat ggagctggag tcagtggggc tgggtggggc
     1741 agctgccttc cgtgaggtcc gggtgcagtc cgtggtggtg gagttcctgc tcacccacgt
     1801 ggaggtcctg ttcagcgata ccttcacctc tgctggcctg gaccctgcag gtcgctgcct
     1861 ccttcccaga cccaagtccc ttgccgggag cagtccctcc actcgcctgc tgacactgga
     1921 agaagcccag gcacgaactc agggtcgtct tggaacaccg acggagccca cgactcctaa
     1981 gactccagcc tcacccgtgg aaaggaggaa gagagagaga gtggagaaac aaaggaagcc
     2041 tgggggtagc agctggaaga cattctttgc tctggggcgg ggccccagca taccccggaa
     2101 gaagccgctg ccatggctga gtggcagccg agcccctcca cagccttcag gcagcagacc
     2161 cgacactgtc actctgagat ctgccaaaag tgaggagtct ctgtcatccc aggccagcgg
     2221 ggctggcctc cagaggctgc accggctacg acgaccccac tccagcagcg atgcttttcc
     2281 cgtgggtcca gcacctgctg gctcctgcga gagcttgtcc tcctcttctt cttcttcctc
     2341 ttcctcttcc tcctcctcct cctcagagtc ctcagcagct ggcctggggc cactctctgg
     2401 ctccccctca caccgcacct cagcctggct agatgatggt gatgaactgg atttcagtcc
     2461 accccgctgt ctggaaggac ttcggggact tgactttgat ccccttacct ttcgctgcag
     2521 cagtcccacc ccgggggacc ctgcacctcc tgccagccca gcacctccag cctcagcctc
     2581 tgccttccca cctcgggcaa ccccacaggc cctgtcaccc catggaccca agcctgcttc
     2641 acccaccgcc ctggacatct cagagcccct ggctgtatca gtaccacctg ctgtcctgga
     2701 actgctgggg gctggaggag cacctgcctc ggccacccca acaccggctc tgagccctaa
     2761 cccgggattg cgcccccatc tcatccccct gttgctgcat ggagctgagg cccagctaag
     2821 tgacacgtgc cagcaggaga tcagcagcaa gctagcacca acccggggag ctccaggcca
     2881 gcacagtcct ggtggcatgg attcaccatt attaccccca gccttgtctc tgctgcgccc
     2941 tggaggggct ccgcccccac cccccaagaa cccagcccgt cttatggccc tggccttggc
     3001 tgagcgggct cagcaggtag cagaacaaca gagccaacaa gggcaggggg gcaccccacc
     3061 tgctcccctc tcccccttcc gacgttcact gtccctggag gtgggtgggg agcccgtggg
     3121 gacttcaggg agtgggcttc accctccgtc cttagcccac ccaggtgcct gggctccagg
     3181 tcccacccct tacctcccaa ggcaacagag tgatggcagc ctggtaagaa gccagcggcc
     3241 cttggggacc tcaaggaggg gtcccagagg gccttcccag gtcagtgccc atctcagggc
     3301 aagtggggct tacagggaca ctccagagat ggcagcccag tcaccatgtt ctatcccctc
     3361 acagggttct aaccccagct tcctctcaac cccccgagag tgtctgccat ctttccttgg
     3421 tgtccccaaa caaggcttgt actctctggg tcccccatcc ttcccaccta actctccagc
     3481 cccagtctgg aggaactctc tgggtgcgcc cccagcactg gacaggggag agaatctgta
     3541 ctatgaaatt ggggtagggg aggggaccta ctcaggcccc agccggtcct ggagtccgtt
     3601 tcattccatg cctcccgaca ggctcaatgc ctcatatggt atgcttggcc agtcaccacc
     3661 actccacagg tcccccgatt tcctgctcaa ctaccccccg cccccctcct gcttcccacc
     3721 tgaccccctt actcactcag tttcccagca ccttgcccgg cgtcccaccc gacctgagcc
     3781 cctctacgtc aacctcgccc tagggcccag gggtccttca cctgcctcct cttcctcctc
     3841 ctcgcctcct gctcaccccc gaagtcggtc agaccctggg ccccctgttc cccgcctccc
     3901 tcagaaacag cgggctccat ggggtcccca taacccccat cgggtgcctg gaccttgggg
     3961 ctcgcccgaa cctttcctgc tttatagggc agccccacca tcctacggga ggggagggga
     4021 ggtccgagga tccttgtaca gaaatggagg acatagaggg gagggggctg gcccccctcc
     4081 tccttacccc acacctagct ggtccttaaa ttcagaagga cagaccagaa gttactgctg
     4141 agataggacc aggaaaggac cctccctgca ttggatcttg gcccaagtca atcccttgtt
     4201 ttgtattttc ttgagctcac caccctaccc caggtttcta actttgtaac ttgctctgat
     4261 gtgggtccct aactccaaaa tcattgtgtc ccgatcgtgg attgcagggc atgaccatcc
     4321 cccacctccc tcttggggcc cttgcacaat ggggggcaag gctgaatcac tgtcctcctc
     4381 cctccaggag cctccagccc tgtacatggg gtggggagac agttcttgcc cacctctccc
     4441 atgcacccca cccattaagc cacctgatga cattaatgaa taaaaatggc agaaatttgt
     4501 tgctgga
//
