LOCUS       NM_001109077            3672 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus Rho GTPase activating protein 30 (Arhgap30),
            mRNA.
ACCESSION   NM_001109077 XM_001053966 XM_573507
VERSION     NM_001109077.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3672)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473985.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_573507.2, XM_001053966.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ211641.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3672
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q24"
     gene            1..3672
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /note="Rho GTPase activating protein 30"
                     /db_xref="GeneID:498282"
                     /db_xref="RGD:1561419"
     exon            1..171
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
     CDS             75..3389
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /codon_start=1
                     /product="rho GTPase-activating protein 30"
                     /protein_id="NP_001102547.1"
                     /db_xref="GeneID:498282"
                     /db_xref="RGD:1561419"
                     /translation="MKSRQKGKKKGSSKERVFGCDLREHLQQSGQEVPQVLRSCAEFV
                     QEYGVVDGIYRLSGVSSNIQKLRQEFEAERKPDLRRDVYLQDIHCVSSLCKAYFRELP
                     DPLLTYRLYDKFAEAVAVQLEPERLVKILEVLQELPVPNYRTLEFLMRHLVHMASFSA
                     QTNMHARNLAIVWAPNLLRSKDIEASGFNGTAAFMEVRVQSIVVEFILTHVDQLFRGD
                     SLSAGVDLESGWKSLPGARASGSAEDLMPTPLSYHLPSILQAGDGPPQIRPYHTIIEI
                     AEHKRKGSLKVRKWRSIFNLGRSGHETKRKLPLRTEDREEKSSKGTLRPAKSMDSLSA
                     AAGVSDEPEGLVGSSSSQPSSLMIESLENSSMDAAEGEQEPEAEALGSANSEPGTPQA
                     GRSAVRALGSSRAERCAGVHISDPYNVNLPLHITSILSVPPNIISNVSLVRLTRGLEC
                     PALQARPSPASGPGPGPGLGPGPPDEKSEARSVPGPLDDLSPMDMAPALEDSLSQEVQ
                     DSFSFLEDLSSSEPEWVGVEDREVAKAEAAEATGAAGAAGAAAFSLGEDDPGMGYLEE
                     LLRVGPQVEEFSVEPPLDDLSLDDAQYVLAPNCCSLDSASPDVEEDYGEEVFLSAYDD
                     LSPLLGPKPINWEGVGSLEEETARCGKQSPTQAEEEQACWETGQDTEAEPQSTSDNRE
                     EAESAPETEIEAGKPDEKGGEAERSQEVMGSLEEGNGEELEAKEENSKGQEAESIEEI
                     KDMGKTREQGRDEEREIERKGGAEKGEDTPVESELDPEHMPQEYLVPEESWVVIHKHE
                     AEKGREGDIRLRRKSDHKSREDQGHGEDSRSPEEGDNGKEVDNSKEQKSIDVETEGMR
                     GVGVHLEEGGLSEGPGVELLRVASTEEINETSEMEQAPVQPSEMEGMEAEGQLNPETC
                     DMYSCPCGSTGGVGMRLASTLVQVRQVRSVPVVPPKPQFAKMPSAMCSKIHIAPANPC
                     PRPGRLDGTPGEKWSSRASWRNGGSLSFDAAVALARERQRTEAQGVRRTQTCTGGGDY
                     SLNSRTSPCSMIPAHSSRPFSCLELPPDAIEGSEPRSRFSLPPRELHPAVPLVVPQRQ
                     TYAFETQTNHGKDERV"
     exon            172..274
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
     exon            275..419
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
     exon            420..502
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
     exon            503..610
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
     exon            611..738
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
     exon            739..913
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
     exon            914..1017
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
     exon            1018..1095
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
     exon            1096..1497
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
     exon            1498..1793
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
     exon            1794..3672
                     /gene="Arhgap30"
                     /gene_synonym="RGD1561419"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actactgact gggattccat gggggactgg taggtcaaag gtcttggggg acagaggtcc
       61 ggggggctct ggccatgaag tctcgacaaa aaggaaagaa gaaaggcagc tccaaggaac
      121 gggtgtttgg gtgtgaccta cgggagcatc tacaacagtc cggccaggaa gtgccccagg
      181 tgctacggag ctgtgcagag tttgtgcaag agtatggagt ggtggatgga atctaccgcc
      241 tctcaggggt ctcctctaac atccagaagc tccggcagga gtttgaggct gagaggaagc
      301 cagacctgcg gcgggacgtt tacctccagg acatccactg tgtctcctcc ttgtgcaagg
      361 cctatttcag agaactacca gatcccctcc tcacttaccg gctctatgac aaatttgctg
      421 aggcagtggc tgtgcagcta gagccagaac gcttggtcaa gatcctagaa gtacttcaag
      481 aactccctgt cccaaactac aggacgctgg agttccttat gcgccacttg gtccacatgg
      541 cctcatttag tgcccaaacc aacatgcatg cccgcaattt ggcgattgtg tgggccccca
      601 acctgctgag gtctaaggac atagaagcct cgggcttcaa tgggacagca gcattcatgg
      661 aggttcgtgt gcagtccatt gttgtggagt tcatcctcac ccatgtggac cagctcttta
      721 ggggtgattc cctctctgct ggtgtagatt tggagagtgg atggaaatca cttccagggg
      781 cccgggcctc aggcagcgct gaggacctca tgcccacacc tctttcctac cacttgccta
      841 gcatcttgca ggctggggat ggaccgccac agatccgacc gtaccatact atcattgaga
      901 ttgcagaaca caagagaaag gggtcattga aggtcaggaa atggcgctct atcttcaatt
      961 tgggtcgctc tggacacgag acaaaacgta aacttccatt gaggactgag gacagggaag
     1021 aaaaatccag taaggggaca ctgcgacctg ctaagagcat ggactcactg agtgctgctg
     1081 ctggagtcag tgacgagcca gaggggctgg tgggctccag cagttctcag ccaagctcac
     1141 tgatgattga gagcttggag aatagttcta tggatgcagc agaaggtgaa caggagcccg
     1201 aagcagaggc actgggtagt gcaaattctg agccaggaac tccacaagct gggcggtcgg
     1261 ctgttcgggc cttaggtagc agtcgagccg agcgttgtgc tggtgtccac atctcagacc
     1321 cctacaacgt caacctccct ctgcacataa cctctatcct cagtgtacct ccaaacatca
     1381 tctctaacgt ctccttggtc aggctcaccc gtggccttga gtgccctgct ctacaagccc
     1441 ggccaagccc tgcttcaggt cctggcccag gcccaggcct tggccctggc cccccagatg
     1501 agaaatcaga ggcaagatca gtcccaggcc ccctggatga cttgagccct atggacatgg
     1561 ctcctgccct ggaggactcc ttgtcccagg aggtgcagga ttccttctcc ttcctagagg
     1621 atttgagcag ctcagagcct gagtgggtgg gggtggagga tagggaggtg gccaaggcag
     1681 aagccgcaga agcaacagga gcagcaggag cagcaggagc agcagctttc tcccttgggg
     1741 aggatgaccc tgggatgggc tacctggagg agctcctgag agttgggcct caggtggaag
     1801 agttctctgt ggagccaccc ctggatgatc tgtctctgga tgatgcacaa tatgtcctgg
     1861 ctcctaactg ctgttccctt gattctgcta gtcctgacgt agaagaggac tatggggaag
     1921 aagtcttctt gagtgcctat gatgatctga gtccccttct ggggcctaaa cccatcaact
     1981 gggaaggtgt agggagtctg gaggaagaga cagcaaggtg tgggaaacaa tctccaacac
     2041 aggctgaaga agaacaggca tgctgggaaa ctgggcagga cacagaggct gagccccaaa
     2101 gcacatcaga taacagggaa gaagccgagt cagctccaga gactgagatt gaggctggaa
     2161 agcctgatga gaaaggaggg gaggctgaaa gaagccaaga ggtgatgggt agtttggaag
     2221 aagggaatgg ggaagagcta gaggccaagg aagaaaattc caaaggtcaa gaggctgaaa
     2281 gtatagagga gatcaaggat atgggcaaaa caagagaaca gggtagagat gaggagagag
     2341 agatcgagag aaaaggagga gccgagaaag gagaggacac cccagtagaa tctgagctgg
     2401 atccagagca tatgccccag gaatacctgg ttcctgagga gagctgggtt gttattcata
     2461 aacatgaggc tgagaaaggc agagagggtg atatcagact gaggaggaag agtgaccata
     2521 agtcaagaga agaccaagga cacggtgaag acagtagaag tccagaagaa ggtgataatg
     2581 ggaaggaagt ggataacagc aaggaacaaa aaagcataga tgtagaaact gaaggcatga
     2641 gaggtgttgg tgtccactta gaagaggggg gcctctctga agggccaggt gtcgagttac
     2701 tgagggttgc cagcacagaa gaaatcaatg aaacctctga aatggaacaa gcccccgtac
     2761 agccatctga aatggaaggg atggaggctg agggacagct caaccctgag acatgtgaca
     2821 tgtattcttg tccctgtggg tcaactggtg gtgtgggcat gcgtctggct tccaccctag
     2881 ttcaggtccg acaggtccgt tctgttcctg tagtgccccc caaaccacag tttgccaaga
     2941 tgcccagtgc aatgtgtagc aagatccaca tagcaccagc aaacccatgt ccaaggcctg
     3001 gtaggcttga tgggactcct ggagaaaaat ggagttctcg agcttcctgg aggaatggag
     3061 gtagtctttc ttttgatgct gctgtggccc tggcccggga acgccagagg accgaagctc
     3121 agggagttcg gcggacccag acctgtactg gaggtgggga ttatagcctc aattccagaa
     3181 cctctccttg tagcatgatc cctgcccatt cttcccggcc ctttagctgt ctggagctcc
     3241 cacctgatgc catagaaggg tctgagccca ggagtcggtt tagtctgccc cctagagagc
     3301 ttcaccctgc tgtacctctt gtggtccctc agcgccagac atatgcattt gaaacacaga
     3361 ccaatcatgg gaaagatgaa agggtgtgat gaagactgga caagaaggac caagaaatca
     3421 tcaccaatct ctggagtact tgcctaacta tctttgatgc cttagcagct gtgatgtcta
     3481 attccatagg cttgggtcct ccagttactt gttttgacct taggaggcac tgccttggtg
     3541 ggtgtacttg agtttgtgtt agacacaaaa agcacttatg tcttagcaga gtcttaagga
     3601 atataaaaga tcttgtttcc atggaactgt gttattagcc aaaacatagg gaaggtagaa
     3661 gcttacggtt tt
//
