LOCUS       XM_006247525            3640 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Rho GTPase activating protein 27
            (Arhgap27), transcript variant X3, mRNA.
ACCESSION   XM_006247525
VERSION     XM_006247525.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006247525.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006247525.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3640
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3640
                     /gene="Arhgap27"
                     /gene_synonym="Arhgap15; CAMGAP1"
                     /note="Rho GTPase activating protein 27; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 ESTs, 8 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     117 samples with support for all annotated introns"
                     /db_xref="GeneID:303583"
                     /db_xref="RGD:735202"
     CDS             252..2264
                     /gene="Arhgap27"
                     /gene_synonym="Arhgap15; CAMGAP1"
                     /codon_start=1
                     /product="rho GTPase-activating protein 27 isoform X2"
                     /protein_id="XP_006247587.1"
                     /db_xref="GeneID:303583"
                     /db_xref="RGD:735202"
                     /translation="MVDMISKLVRRQSRALRAQVDEPPEPVYANVERQPQVTSPRSAA
                     APPRLSPVWETHTDAGTGRPYYYNPDTGVTTWESPFEAPEGATSPTTSRASVGSGESL
                     ETEWGQYWDEESGRVFFYNPLTGETVWEDETEELEDDPEEQLEMQPSLSPRSPGQQRP
                     PTPETDYPELLTSYPEEDYSPVGSFSDLGPTSPLVAPPGWSCQITPEKQMLYTNQFTQ
                     EQWVRLEDQEGKPYFYNPEDSSVQWELPQVPVPAPRSGRKSSQDSDTPAQASPPEEKI
                     KTLDKAGVLHRTKTVDKGKRLRKKHWNASWTVLEGGVLTFFKDSKTSAASGLRQPSKL
                     STPEYTVELRGASLSWAPKDKSSKKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAEG
                     IEELSADLPQREEGEPSSADFGSSERLGSWKEEDVRPNAASPSLNPGSQESDLSRVRH
                     KLRKFLQRRPTLQSLREKGYIKDQVFGCALAQLCERERSPVPRFVQQCIRTVEARGLD
                     IDGLYRISGNLATIQKLRYKVDHDERLDLDDGRWEDVHVITGALKLFFRELPEPLFPF
                     SHFHQFIAAIKLQDPAQRSRCVRDLVRTLPAPNHDTLRLLIQHLCRVIEHGEQNRMSV
                     QNVAIVFGPTLLRPEMEEASMPMTMVFQNQVVELILHQCADIFPPH"
ORIGIN      
        1 cggaggggac agccagtggt gtccaggaaa cgtgaaagca ccccaacctg caccacccca
       61 cacccatcag gcaactttgt ctcaggcact tccgcagctg tgacaggaaa ccagctacag
      121 tcttagcctc cccgccatct cgaggcaact tcttgtttcc cagttgccct ctgccagccc
      181 ggagttgtgg tcctgggctc caccccctaa gctttcccag gctccatccc agcaactcag
      241 agggggccgg gatggtggac atgatttcaa aactggtccg gaggcagagc cgggccctgc
      301 gggcacaggt agacgagcca ccggaaccag tgtatgccaa cgtagagagg caacctcagg
      361 tcacgtcgcc gcgctctgct gcagctcctc ctcggctcag cccggtgtgg gagacgcaca
      421 cagatgcggg cactgggcgc ccctactact acaaccccga cacgggcgtg accacctggg
      481 agtcaccctt tgaagcacct gaaggcgcca ccagcccgac tacctcccgg gcctctgtgg
      541 gcagcgggga gagcctggag acagagtggg gccagtactg ggatgaggag agcggcaggg
      601 tgttcttcta caaccccttg acgggtgaga cggtctggga ggacgagact gaggagctgg
      661 aggacgatcc cgaggaacaa ctggagatgc aacccagcct gagcccgcga agcccggggc
      721 agcagaggcc cccgactcct gaaacagact accctgaatt actgaccagt tatcctgaag
      781 aggactattc tcctgtgggc tccttcagtg atctcggccc aacttctccc ttggttgcac
      841 cccctggctg gtcctgtcaa attaccccag agaagcagat gctctacacc aaccagttca
      901 ctcaagagca gtgggtaagg ttggaggacc aggaagggaa gccatatttc tacaatccag
      961 aggactcctc tgttcagtgg gaactgcccc aggtcccggt ccctgcccct cggagtggtc
     1021 gtaaatccag ccaggatagt gatactccag cccaggctag ccctccagag gagaagatca
     1081 agaccctgga caaggcagga gtgctccatc gaaccaagac agtagacaag gggaagagac
     1141 ttcggaagaa acactggaat gcttcctgga ccgtgctgga gggcggtgtc ctgaccttct
     1201 tcaaggattc aaagacctca gctgcaagcg gcctgaggca gccttccaaa ctctccaccc
     1261 ctgaatatac agtcgaactg aggggggcct cgctctcgtg ggcccccaaa gacaaatcca
     1321 gcaagaagaa tgtgctagag ctccggagcc gagatggctc agagtacctg atccagcatg
     1381 actcagaggc catcatcagc acctggcaca aggccattgc cgaaggcatc gaggagctgt
     1441 ctgcagacct gccccaaagg gaggaaggtg aacccagcag tgctgatttt gggtccagtg
     1501 agcgcctcgg aagctggaag gaggaggatg tgcggccgaa tgcagcctca ccctcgctca
     1561 accccggaag ccaggaaagc gacttgagca gggtccggca caagctccgc aaattcctac
     1621 agagacgacc cactctgcag tctttgcggg agaagggcta catcaaagac caggtgtttg
     1681 gatgtgcact ggctcaactg tgcgagcgcg agaggagccc tgtgccacgc ttcgtgcagc
     1741 aatgcatccg caccgtcgag gcccgggggc tggatattga tgggctgtac cgcatcagtg
     1801 ggaacctggc caccatccag aagctgcgct ataaggtgga tcacgatgaa cgcttggacc
     1861 tggacgatgg gcgctgggaa gacgtccacg tgatcacagg tgccctgaag ctcttcttcc
     1921 gagagctgcc ggaacccctc ttccccttct cgcacttcca ccagttcata gcagccatca
     1981 agctgcaaga cccggcccag cgcagccgct gtgtgcgtga cctggtgcgt acgctaccag
     2041 cccccaacca cgacactctc cgcctgctca tccagcatct gtgtcgggtg atcgagcatg
     2101 gcgagcagaa ccgtatgtct gtgcagaatg tggccatagt gttcgggccc acgctgctga
     2161 ggcctgagat ggaggaagcc agcatgccca tgaccatggt gttccagaac caggtggtag
     2221 agctcatcct acatcagtgc gcagacatct tcccaccgca ctgactctgg accctgggtt
     2281 agctggaggc cgcgaggctg gacttcctct gaggctctcc acttcccacc ccgctgcact
     2341 gtgacttcaa caccccctcg attcagaggg tacggtgacc cctggtgggt agttcatgaa
     2401 atgtgatttc tccctgtcac atcccctgta ggtgttcatt agggcccttt cccgattaca
     2461 actccgccta ttgcgtggat gtgataatgt ccctggggct gggaggtgaa tgtttgtttt
     2521 agagtcccat ccacccgccc accccggctg aaagaaggga tttggtgaga gccttctggt
     2581 gtcctcaggc ctgcacctgg ccaggccttg gagaccctgt aggccccgtg ctatgcaaga
     2641 ggtcatgaag cagctactga cgtcatctct gctgccagga aggggactga ccctggctgc
     2701 cagcccaggc cactgactgc tttcctcagc cttccactcc agtgtcaccc tgacacatgc
     2761 cacctgagaa cttttcctat gcttccctct ctccctgggc cacacccgtt ctccacagga
     2821 gttcttcata ctaaccccat gccaaacctg cacctactcc acatggctcc tgggatctgg
     2881 gacttgcaga agtcgaatta cttcaggggt ccataggtga tccggttccc ggcaaaggct
     2941 ctccccacag caagcccagc ttctagagga ggaagtgatc cctcaacccc cagcagcaca
     3001 gcctataggt ggaccagagt aaatctgcag gagcactttg tgtaggttag aggttggggg
     3061 accctgaagg cagcagggaa cctaccacag ctggtttttt ggggagggac agcataaata
     3121 gaagccccca gctgctgtct gtaccctggc tggatgccta cctggtaccc acttgccacg
     3181 cagagctagg agaggcctgt ccggaaggtc tcagccttag gcaaacagtt gaacctgtgt
     3241 ctgctgcccg cttcctccct catgcacaca ccacctcagt ttatgggtct gaacccctag
     3301 ctccaccccc cgccccaccc ccactgactc aacaaacaat aatagctaat atttattaaa
     3361 cattcgtact atgccagtct ttcccttggg tttctccctt ggttccatgc agtccatatt
     3421 tattgtgggt cctcacgtgc cgggcactgc gctctggggt agaggttctg cgcatgcgtt
     3481 ctggagcttg acacccagtt agtacggctg atgcgagccc agccctgacc gtggcagggc
     3541 gcagaagaga acgagtggag gcctcttgct gtacacctat atatttaaag tcccaaggca
     3601 agcgaataac taactgttaa ataaaatgtt tattctccta
//
