LOCUS       NM_053980                927 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus ADP-ribosylation factor related protein 1
            (Arfrp1), mRNA.
ACCESSION   NM_053980
VERSION     NM_053980.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Nishimoto-Morita,K., Shin,H.W., Mitsuhashi,H., Kitamura,M.,
            Zhang,Q., Johannes,L. and Nakayama,K.
  TITLE     Differential effects of depletion of ARL1 and ARFRP1 on membrane
            trafficking between the trans-Golgi network and endosomes
  JOURNAL   J Biol Chem 284 (16), 10583-10592 (2009)
   PUBMED   19224922
REFERENCE   2  (bases 1 to 927)
  AUTHORS   Shin,H.W., Kobayashi,H., Kitamura,M., Waguri,S., Suganuma,T.,
            Uchiyama,Y. and Nakayama,K.
  TITLE     Roles of ARFRP1 (ADP-ribosylation factor-related protein 1) in
            post-Golgi membrane trafficking
  JOURNAL   J Cell Sci 118 (Pt 17), 4039-4048 (2005)
   PUBMED   16129887
REFERENCE   3  (bases 1 to 927)
  AUTHORS   Mueller,A.G., Moser,M., Kluge,R., Leder,S., Blum,M., Buttner,R.,
            Joost,H.G. and Schurmann,A.
  TITLE     Embryonic lethality caused by apoptosis during gastrulation in mice
            lacking the gene of the ADP-ribosylation factor-related protein 1
  JOURNAL   Mol Cell Biol 22 (5), 1488-1494 (2002)
   PUBMED   11839814
REFERENCE   4  (bases 1 to 927)
  AUTHORS   Schurmann,A., Massmann,S. and Joost,H.G.
  TITLE     ARP is a plasma membrane-associated Ras-related GTPase with remote
            similarity to the family of ADP-ribosylation factors
  JOURNAL   J Biol Chem 270 (51), 30657-30663 (1995)
   PUBMED   8530503
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            [WARNING] On Apr 25, 2024 this sequence was replaced by
            NM_053980.3.
            
            On Nov 27, 2020 this sequence version replaced NM_053980.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: X78603.1, SRR26360176.2196927.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN06621351,
                                           SAMN06680416 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-123               JAXUCZ010000003.1  188851309-188851431 c
            124-229             JAXUCZ010000003.1  188850732-188850837 c
            230-317             JAXUCZ010000003.1  188850388-188850475 c
            318-400             JAXUCZ010000003.1  188850091-188850173 c
            401-482             JAXUCZ010000003.1  188847634-188847715 c
            483-553             JAXUCZ010000003.1  188847245-188847315 c
            554-654             JAXUCZ010000003.1  188845857-188845957 c
            655-927             JAXUCZ010000003.1  188845511-188845783 c
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q43"
     gene            1..927
                     /gene="Arfrp1"
                     /note="ADP-ribosylation factor related protein 1"
                     /db_xref="GeneID:117051"
                     /db_xref="RGD:621683"
     exon            1..123
                     /gene="Arfrp1"
                     /inference="alignment:Splign:2.1.0"
     exon            124..229
                     /gene="Arfrp1"
                     /inference="alignment:Splign:2.1.0"
     CDS             137..742
                     /gene="Arfrp1"
                     /note="ARP; ARF-related protein 1"
                     /codon_start=1
                     /product="ADP-ribosylation factor-related protein 1"
                     /protein_id="NP_446432.1"
                     /db_xref="GeneID:117051"
                     /db_xref="RGD:621683"
                     /translation="MYTLLSGLYKYMFQKDEYCILILGLDNAGKTTFLEQSKTRFNKN
                     YKGMSLSKITTTVGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDS
                     TDEERLSESKEAFEKVVSSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIGR
                     RDCLTQACSALTGKGVREGIEWMVKCVVRNVHRPPRQRDIT"
     exon            230..317
                     /gene="Arfrp1"
                     /inference="alignment:Splign:2.1.0"
     exon            318..400
                     /gene="Arfrp1"
                     /inference="alignment:Splign:2.1.0"
     exon            401..482
                     /gene="Arfrp1"
                     /inference="alignment:Splign:2.1.0"
     exon            483..553
                     /gene="Arfrp1"
                     /inference="alignment:Splign:2.1.0"
     exon            554..654
                     /gene="Arfrp1"
                     /inference="alignment:Splign:2.1.0"
     exon            655..927
                     /gene="Arfrp1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actccgcccg tgctgggtct gtcgatcctc gttccgtcag gcaccgtgag gggtcaacgt
       61 gaggtcggtg gggttagtaa cgcggtggcg gcggctcctc ctccaaaatt tgagcaggta
      121 cagggtgcca aacaggatgt acacgctgct ttccgggctg tacaagtaca tgttccagaa
      181 ggatgaatac tgcatcctga tcctgggcct ggacaatgct gggaagacga ccttcctgga
      241 acagtcaaaa acacgattta acaagaacta caagggaatg agtctatcca aaatcaccac
      301 taccgtgggt ctaaacattg gcactgtgga cgtaggaaag gctcgtctca tgttttggga
      361 cttaggtggg caggaagagc tgcagtcgtt gtgggacaag tactatgcag agtgccatgg
      421 tgtcatctat gtcattgatt ccactgatga ggagaggctg tcagaatcaa aagaggcatt
      481 tgagaaggtg gtttcgagtg aagcactgga cggtgttccc atcctggtgt tggccaacaa
      541 gcaggatgtg gagacttgcc tctccattcc tgacatcaag actgcattca gtgactgtac
      601 ctgcaagatt ggcaggcgag attgtttgac ccaggcctgc tctgccctca caggcaaggg
      661 agttcgagag ggcatcgaat ggatggtgaa gtgtgtcgta cggaatgttc accggccacc
      721 acggcagagg gacatcacat aagcaccttc atcctcacag tcttggactg ttcatcccct
      781 agtgttggaa gagtattctc tgctggcttc tgtcctcctg atgctggggg ttgagctggg
      841 tttgtctgtt catttttatt tgctttatgt tttctctaag acaaactttt ctctgtgtct
      901 ggaaaagtgt aggtattcag agacaaa
//
