LOCUS       NM_024151               1603 bp    mRNA    linear   ROD 12-NOV-2024
DEFINITION  Rattus norvegicus ARF GTPase 4 (Arf4), mRNA.
ACCESSION   NM_024151
VERSION     NM_024151.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Yu,J., Chia,J., Canning,C.A., Jones,C.M., Bard,F.A. and
            Virshup,D.M.
  TITLE     WLS retrograde transport to the endoplasmic reticulum during Wnt
            secretion
  JOURNAL   Dev Cell 29 (3), 277-291 (2014)
   PUBMED   24768165
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Follit,J.A., San Agustin,J.T., Jonassen,J.A., Huang,T.,
            Rivera-Perez,J.A., Tremblay,K.D. and Pazour,G.J.
  TITLE     Arf4 is required for Mammalian development but dispensable for
            ciliary assembly
  JOURNAL   PLoS Genet 10 (2), e1004170 (2014)
   PUBMED   24586199
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1603)
  AUTHORS   Zanivan,S., Maione,F., Hein,M.Y., Hernandez-Fernaud,J.R.,
            Ostasiewicz,P., Giraudo,E. and Mann,M.
  TITLE     SILAC-based proteomics of human primary endothelial cell
            morphogenesis unveils tumor angiogenic markers
  JOURNAL   Mol Cell Proteomics 12 (12), 3599-3611 (2013)
   PUBMED   23979707
REFERENCE   4  (bases 1 to 1603)
  AUTHORS   Jang,S.Y., Jang,S.W. and Ko,J.
  TITLE     Regulation of ADP-ribosylation factor 4 expression by small leucine
            zipper protein and involvement in breast cancer cell migration
  JOURNAL   Cancer Lett 314 (2), 185-197 (2012)
   PUBMED   22004728
REFERENCE   5  (bases 1 to 1603)
  AUTHORS   Jain,S., Yoon,S.Y., Zhu,L., Brodbeck,J., Dai,J., Walker,D. and
            Huang,Y.
  TITLE     Arf4 determines dentate gyrus-mediated pattern separation by
            regulating dendritic spine development
  JOURNAL   PLoS One 7 (9), e46340 (2012)
   PUBMED   23050017
REFERENCE   6  (bases 1 to 1603)
  AUTHORS   Chen,L., Johnson,R.C. and Milgram,S.L.
  TITLE     P-CIP1, a novel protein that interacts with the cytosolic domain of
            peptidylglycine alpha-amidating monooxygenase, is associated with
            endosomes
  JOURNAL   J Biol Chem 273 (50), 33524-33532 (1998)
   PUBMED   9837933
REFERENCE   7  (bases 1 to 1603)
  AUTHORS   Hosaka,M., Toda,K., Takatsu,H., Torii,S., Murakami,K. and
            Nakayama,K.
  TITLE     Structure and intracellular localization of mouse ADP-ribosylation
            factors type 1 to type 6 (ARF1-ARF6)
  JOURNAL   J Biochem 120 (4), 813-819 (1996)
   PUBMED   8947846
REFERENCE   8  (bases 1 to 1603)
  AUTHORS   Price,S.R., Nightingale,M.S., Tsuchiya,M., Moss,J. and Vaughan,M.
  TITLE     Interspecies relationships among ADP-ribosylation factors (ARFs):
            evidence of evolutionary pressure to maintain individual identities
  JOURNAL   Mol Cell Biochem 159 (1), 15-23 (1996)
   PUBMED   8813705
REFERENCE   9  (bases 1 to 1603)
  AUTHORS   Mishima,K., Price,S.R., Nightingale,M.S., Kousvelari,E., Moss,J.
            and Vaughan,M.
  TITLE     Regulation of ADP-ribosylation factor (ARF) expression.
            Cross-species conservation of the developmental and tissue-specific
            alternative polyadenylation of ARF 4 mRNA
  JOURNAL   J Biol Chem 267 (33), 24109-24116 (1992)
   PUBMED   1358888
REFERENCE   10 (bases 1 to 1603)
  AUTHORS   Kahn,R.A., Kern,F.G., Clark,J., Gelmann,E.P. and Rulka,C.
  TITLE     Human ADP-ribosylation factors. A functionally conserved family of
            GTP-binding proteins
  JOURNAL   J Biol Chem 266 (4), 2606-2614 (1991)
   PUBMED   1899243
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Nov 26, 2020 this sequence version replaced NM_024151.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: L12383.1, FQ213804.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-283               JAXUCZ010000016.1  1903436-1903718
            284-364             JAXUCZ010000016.1  1910864-1910944
            365-474             JAXUCZ010000016.1  1911119-1911228
            475-546             JAXUCZ010000016.1  1915783-1915854
            547-672             JAXUCZ010000016.1  1916767-1916892
            673-1603            JAXUCZ010000016.1  1919082-1920012
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p16"
     gene            1..1603
                     /gene="Arf4"
                     /note="ARF GTPase 4"
                     /db_xref="GeneID:79120"
                     /db_xref="RGD:621275"
     exon            1..283
                     /gene="Arf4"
                     /inference="alignment:Splign:2.1.0"
     CDS             217..759
                     /gene="Arf4"
                     /codon_start=1
                     /product="ADP-ribosylation factor 4"
                     /protein_id="NP_077065.1"
                     /db_xref="GeneID:79120"
                     /db_xref="RGD:621275"
                     /translation="MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVT
                     TIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQE
                     GAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCA
                     TQGTGLYEGLDWLSNELSKR"
     exon            284..364
                     /gene="Arf4"
                     /inference="alignment:Splign:2.1.0"
     exon            365..474
                     /gene="Arf4"
                     /inference="alignment:Splign:2.1.0"
     exon            475..546
                     /gene="Arf4"
                     /inference="alignment:Splign:2.1.0"
     exon            547..672
                     /gene="Arf4"
                     /inference="alignment:Splign:2.1.0"
     exon            673..1603
                     /gene="Arf4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagccgaac acttaacgcc gcgccggagc caccgcacca gtcgccgagc aggtcccggt
       61 cccgctacgt cgtgtcccgc ggctctgccg acactccggc ctgagagacg ggtcttcagc
      121 cttttctctt ccgcccactc agttgtgagc cggaaccgtg aaggcccgag ggcggaccag
      181 accctctctt tttgaccatc aagtgccacc accgctatgg gcctcaccat ctcctctctc
      241 ttctcgcgcc tcttcggcaa gaagcagatg cgcattttga tggttggatt ggatgctgcg
      301 ggcaagacga cgattctgta taaactgaaa ctaggggaga tagtcaccac cattcctacc
      361 attggtttta atgtggaaac agtagaatat aagaacattt gtttcacagt ttgggatgtt
      421 ggtggtcaag ataaaattag gcctctctgg aggcattact tccagaatac ccagggtctc
      481 attttcgtgg tagatagcaa tgatcgtgaa agaattcagg aaggagcagc cgtgctgcag
      541 aaaatgcttc tggaagatga gctgcaggat gctgtgctgc tgctttttgc caacaaacag
      601 gatttgccaa atgctatggc catcagtgag atgacagaca agttaggtct tcagtctctc
      661 cggaacagaa catggtatgt ccaagccact tgtgctacac aaggaactgg tctgtacgag
      721 gggctggatt ggctgtcaaa tgaactttca aaacgctaaa tgaaactgga tatctaacca
      781 aggacatgtt tgatagaatt ggtctaggct tgttacaaca aaattagttt gcatcttggt
      841 tattaaagga tatctgagac ggtttgggca gaaattacag catttaaaac ttgttttgtt
      901 gccaattatt gtttaccaag aacaatgttg ctgtttagca atatgcttgg gtttaagaga
      961 aattctcctt gggggaaaaa agtgtccatt attatacttc ccctgaacct gaatgcctgg
     1021 atagatagcg attgtgacac ccttaaataa atctgttttg agtgtttttt gagcccacac
     1081 caataatgtt ttaaagttac ccccttggaa ctcactgata cctatcattc ctcgggcagt
     1141 ctgctgagtt aaaaatgtag cattccattt gtatttattt cccccttgcc aaaaagattt
     1201 ttctaataat gcttgtactg gccagggatg agctccacaa cactattcag ttttcttgta
     1261 ctgaggattc ccccacctcc ctcacattat tgactcctgg cttctatcag ccaaactttg
     1321 atgtagtttg gatttgatag ctaattctgg gctggtttca aagagttcat attgagataa
     1381 cttttaatac tcagcaaatt gtcttccttt atattatctt ttttatgttg catgttgctt
     1441 ttggaatcag cctgactctt tgcccagcat atgatagttc tgctggtatt ttactgttta
     1501 ctgatgaaca tatcttcatt aagaattttt tgaaaactca tcaaattcaa tgaataagtt
     1561 ttcttcataa cccatttgga attattccta ataaaatgat ttt
//
