LOCUS       NM_001025066            1600 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus apolipoprotein L 9a (Apol9a), mRNA.
ACCESSION   NM_001025066 XM_578688
VERSION     NM_001025066.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083768.1.
            
            [WARNING] On Apr 23, 2024 this sequence was replaced by
            NM_001025066.2.
            
            On Jun 25, 2005 this sequence version replaced XM_578688.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083768.1, CK603040.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMEA5760476
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..1600
                     /gene="Apol9a"
                     /note="apolipoprotein L 9a"
                     /db_xref="GeneID:503164"
                     /db_xref="RGD:1562332"
     exon            1..145
                     /gene="Apol9a"
                     /inference="alignment:Splign:2.1.0"
     exon            146..271
                     /gene="Apol9a"
                     /inference="alignment:Splign:2.1.0"
     CDS             189..1130
                     /gene="Apol9a"
                     /codon_start=1
                     /product="apolipoprotein L 9a"
                     /protein_id="NP_001020237.1"
                     /db_xref="GeneID:503164"
                     /db_xref="RGD:1562332"
                     /translation="MASRGYLHHLLTAEGAWEEFVSKAKLPRDRAVALHKALRDLTAL
                     LAIAERGRSRKGWKGKEKFVKAFPCLKADLEEHISQLYALADHAEELHRGCTVSNMVA
                     DSFSVASDILNLFGLFLAPESAEGSLVLSAAGLGLGVAATVTNVATSIMKETSRVLDG
                     VEAGHHGSTAMDILEEAGTSVARIASEIPQATRDITRDLEALEQHMNALSLVRANPRL
                     EEDARALINAGSIPAQRAKQVRASLKGTPLAMSKEDRIRSATTTGVTLLRDVGSLVNE
                     SKQLYEGSASESAAALRKLAQELEEKLGELMKFYETI"
     exon            272..1568
                     /gene="Apol9a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccagctgct tctacacagc cacggccatc tgatcctgct caagctcagt aagttgagcc
       61 tcttcacccc tctgcctctg catcctcata aagctacctc aagacagagc gtaactgcct
      121 cattctagga gtggactcgg ggaagacagc agacacacca tcagggagcc cctgggtatc
      181 tccagaacat ggcaagccgt ggatacctgc atcacctgct gactgcagag ggagcctggg
      241 aggagtttgt atcaaaggcc aagttgccca gggatagggc agtggccctc cacaaagcac
      301 tgagggatct gacagcactc ttggccatag cagaaagagg cagatctcgg aaaggctgga
      361 aaggcaagga gaagtttgtg aaagcatttc cttgcttgaa agcagacttg gaggagcaca
      421 tcagccagct ctatgcccta gccgaccatg ctgaggaact gcacaggggc tgcaccgtct
      481 ccaacatggt ggctgactcc ttcagtgttg cctccgacat cctgaacctc tttggtctct
      541 ttctggcacc tgagtcagca gagggaagtc tggtgctctc ggcagcaggc ttggggctgg
      601 gggtagcagc tactgtgact aatgttgcta cttcaatcat gaaggaaaca agcagggttt
      661 tggatggagt cgaagctggt caccatggtt caaccgccat ggatatactg gaggaagctg
      721 gcacaagtgt ggctaggatt gccagcgaga tccctcaggc taccagagat atcaccagag
      781 acctggaagc ccttgagcag cacatgaatg ccctcagtct ggtcagagcc aaccctcgcc
      841 tagaagaaga tgccagggcc ctcatcaatg caggtagcat ccctgcccaa cgggctaaac
      901 aggtgcgggc cagtctgaaa ggaacccctc tggcaatgag caaggaagac cggatccgca
      961 gtgccaccac cactggggtc accctcttgc gtgatgtggg gagccttgtg aacgagtcga
     1021 agcagttgta cgaagggtct gcttccgaat cggcagcagc actaaggaag ctggctcagg
     1081 agctggagga gaagctaggg gagctcatga aattctacga gacaatctga tcaggttcca
     1141 gccagtcacc ccatccccaa gacatgcaga catcagggga gaggatctgg acagaggtag
     1201 ggaccatgga ggtgctgtta gaaggagagc aagactacag tcaggtccga gggacatagt
     1261 gtggaggcct gttgatgaac acagcaggtt agaggatgga gcagtggatc aagtgagatc
     1321 cactggagcc tgagacgagg gaccagagga tgtgctgcaa gagggactgg gaaaattgaa
     1381 atctagacta aacatggaaa aaaggcagtt tcgaaagact agaaaaccct ccccatctga
     1441 gccattggaa accccacaaa acacaaacca gagagaaaag tgtgtgctct ctaaacaagt
     1501 cgtggccccc agttccccag cccactccca ccctcagggg tggcatcaaa taaattgttt
     1561 ccatttcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
