LOCUS       NM_001277396            1887 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus APEX nuclease (apurinic/apyrimidinic
            endonuclease) 2-like 1 (Apex2l1), mRNA.
ACCESSION   NM_001277396 XM_001059968 XM_223499
VERSION     NM_001277396.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Nishikawa,T. and Nishimura,M.
  TITLE     A rapid and easy electrophoretic method for detecting biochemical
            loci of rat (Rattus norvegices)
  JOURNAL   Exp Anim 45 (2), 189-194 (1996)
   PUBMED   8726146
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000014.1.
            
            On Sep 30, 2022 this sequence version replaced NM_001277396.1.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360181.807185.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1887              JAXUCZ010000014.1  71378722-71380608   c
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14q21"
     gene            1..1887
                     /gene="Apex2l1"
                     /note="APEX nuclease (apurinic/apyrimidinic endonuclease)
                     2-like 1"
                     /db_xref="GeneID:289662"
                     /db_xref="RGD:1586200"
     exon            1..1887
                     /gene="Apex2l1"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..1609
                     /gene="Apex2l1"
                     /EC_number="4.2.99.18"
                     /codon_start=1
                     /product="DNA-(apurinic or apyrimidinic site) lyase
                     2-like"
                     /protein_id="NP_001264325.1"
                     /db_xref="GeneID:289662"
                     /db_xref="RGD:1586200"
                     /translation="MLRVVSWNINGIRRPLQGLGCEVTSNCPTALRHILRELDADIVC
                     LQETKVSRDALTEPLAVVEGYNSYFSFSRSRSGYSGVATFCKDSVTPVAAEEGLSGQF
                     ATLSGHVGCYGNMNEFTQEQLRALDSEGRALLTQHKICTQEGKEKPLTLINVYCPHAS
                     PGNHERLTFKMRFYRLLQIRAEALLAAGSHVIILGDINTAHHPIDHCNAGNLECFEED
                     LGRRWMDGLLSNLEYPAGSHIGPFMDSYRYFYPKQERAFTCWSMISGARSLNYGTRLD
                     YILGNRDLIIDTLQDAFLLPEVMGSDHCPVGAVLNVSCVPAKQCPALCTRFLPEFAGT
                     QLKILGFLVPCEQEPMCGQSVLQSSKQIQPQKQRKSQAHRHSSRPRKPGSRRPQKNLR
                     SYFQPSVSLSQTSPAVELPQLPLVGTLVTPTTLEGDVIATGTDKQVKVSEVRDEEEAQ
                     ASFWKSVLSGPSPMPLCGGHREPCVMRIVKKPGPNLGRHFYTCAKPQGPPNDLSSSCN
                     FFLWSKPR"
ORIGIN      
        1 acttccggca atttgcctat gcctgtacat tcttcccgaa gcagtgcagt ttatcaaaat
       61 gttgcgcgtg gtaagctgga acatcaatgg gatccggaga cccctgcaag gtctgggatg
      121 cgaggtaacc agcaactgtc ccacagcctt gagacatatt ttaagggaac tggatgccga
      181 tatagtctgt ctccaggaga ccaaagtgag cagagatgcg ctgacagagc ccctggctgt
      241 tgttgagggc tataactcct atttcagctt cagccgcagc cggagtggct attctggtgt
      301 agctactttc tgtaaggaca gtgttacacc agtggctgct gaagaaggcc tgagtggtca
      361 gtttgccacc ctgagtgggc atgtcggttg ctatggaaac atgaacgagt tcacccaaga
      421 gcaactccgg gctctggata gcgagggccg ggctctcctt acacagcaca agatctgtac
      481 acaggaaggg aaggagaagc ctttgaccct gatcaatgtg tactgcccgc atgccagtcc
      541 tgggaaccat gagcggctga cctttaagat gcgtttctat cgcctgctgc agatccgagc
      601 agaagcactc ctggcagccg gaagtcatgt gataatcctg ggggacataa atacagccca
      661 ccatcccatt gaccactgta atgctggcaa tctggagtgc tttgaagaag acctgggacg
      721 tagatggatg gatggcttgc tcagtaacct ggaatacccg gctgggtccc atatagggcc
      781 tttcatggat agctaccgct atttctatcc aaaacaggag agggccttca cctgctggtc
      841 aatgatcagt ggggcacgca gtctcaacta tggtacccga cttgactaca tcctaggaaa
      901 cagggatcta attatagaca ctttacaaga tgcctttctg ctccccgagg tgatgggctc
      961 tgaccactgc cctgtgggag ctgtcttgaa tgtgtcctgt gtgccagcga aacagtgtcc
     1021 agctctgtgc acccgtttcc ttcccgagtt tgcaggtacc cagctcaaga ttcttggctt
     1081 cctggtccct tgtgaacaag aacctatgtg cgggcagtca gtcctgcagt ccagcaaaca
     1141 aatccaacca cagaaacaaa gaaaatctca agcccatagg cattcatcca ggcctcgaaa
     1201 gcctggttcc agaagacccc agaaaaacct gaggagctat tttcagcctt ctgttagcct
     1261 ttcccagact tctcctgctg tggaactgcc tcagctgcct ctagtgggca ctctcgtaac
     1321 tccaacaact ctggaagggg atgtgatagc cacagggacc gataagcagg tcaaggtttc
     1381 tgaggtcaga gatgaggagg aggcacaggc ctcattctgg aagtccgtgc tgagtgggcc
     1441 atcaccaatg cccctctgtg gaggccacag ggagccgtgt gtgatgcgga tcgtgaaaaa
     1501 accaggacct aatctgggtc gccatttcta cacatgtgcc aagccacaag gtcctccaaa
     1561 tgatctctca tcaagctgca acttcttcct gtggagcaag cccagatgaa gcaactgagg
     1621 cctagtgatg tctagcctgg tcaccctaca cagtctgatg ccaggtctct acttcctaag
     1681 ttgccttttc ccttgagact tcttttcttc tgcttcctct tccctttccc tgccctagct
     1741 tcccctgagt cattctcctc acagctccct ttcttcctct ttgtccacac aggagcaagc
     1801 tgctcaggaa ggtgtaattt gaaacccctg atgcctggaa tgggcaatgt atttgttcat
     1861 aagcaaagtc tgtgtctttg tttcagt
//
