LOCUS       NM_001030036            3070 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Rattus norvegicus adaptor related protein complex 5 subunit mu 1
            (Ap5m1), mRNA.
ACCESSION   NM_001030036 XM_224011
VERSION     NM_001030036.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3070)
  AUTHORS   Hirst,J., Barlow,L.D., Francisco,G.C., Sahlender,D.A., Seaman,M.N.,
            Dacks,J.B. and Robinson,M.S.
  TITLE     The fifth adaptor protein complex
  JOURNAL   PLoS Biol 9 (10), e1001170 (2011)
   PUBMED   22022230
  REMARK    Erratum:[PLoS Biol. 2012 Mar;10(3). doi:
            10.1371/annotation/89dff893-c156-44bb-a731-bfcc91843583]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC099829.1.
            
            On Aug 5, 2005 this sequence version replaced XM_224011.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC099829.1, SRR8487227.41243.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132273, SAMD00132274
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3070
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p14"
     gene            1..3070
                     /gene="Ap5m1"
                     /gene_synonym="Mu5; Mudeng; RGD1308087"
                     /note="adaptor related protein complex 5 subunit mu 1"
                     /db_xref="GeneID:305861"
                     /db_xref="RGD:1308087"
     exon            1..304
                     /gene="Ap5m1"
                     /gene_synonym="Mu5; Mudeng; RGD1308087"
                     /inference="alignment:Splign:2.1.0"
     CDS             231..1703
                     /gene="Ap5m1"
                     /gene_synonym="Mu5; Mudeng; RGD1308087"
                     /note="MHD domain-containing death-inducing protein;
                     MU-2/AP1M2 domain containing, death-inducing;
                     adapter-related protein complex 5 subunit mu-1; muD;
                     adapter-related protein complex 5 mu subunit;
                     adaptor-related protein complex 5, mu 1 subunit;
                     mu-2-related death-inducing protein"
                     /codon_start=1
                     /product="AP-5 complex subunit mu-1"
                     /protein_id="NP_001025207.1"
                     /db_xref="GeneID:305861"
                     /db_xref="RGD:1308087"
                     /translation="MALRAVWLIRHEPGTPLGGTVKFSRRYPTVEKRAKVFNGMNYVP
                     VPEDGPFLKALLFQLRLLDDDKDFVESRDSCSNINKTSIYGLSVGGEDLWPVIAFLRN
                     DMIYASVPLVEQALSPRPPLISISGVSQGLELLLGVHDFLYSSQKNDTDLHSRLSQLP
                     DLLLQACPLGTLLDANLQNSLNSLNFVSVTQPQKQPAWKVGTYKGKAQISISITENVK
                     SMQYGKQDIADTWQVVGTVACKCDLEGVMPNVTISLNLPTNGSPLQDIIVHPCVTSLD
                     SAILTSSSIDTVDDSAFSGPYKFPFTPPLESFNLCHYTSQVPVPPILGSYHMKEDGAQ
                     LKITVNLKLHESVRNNFEICEAHIPFYNRGPITHLEYKVSFGQLEVFREKSLLVWIIG
                     QKFPKSMEISLSGTLTFRVQGHNRQPFDHICIGSTAYVKLNFRIADYTLTGCYADQHS
                     VQVFASGKPKISAYRKLISSDYYIWNSKASAPVTYASLLP"
     exon            305..950
                     /gene="Ap5m1"
                     /gene_synonym="Mu5; Mudeng; RGD1308087"
                     /inference="alignment:Splign:2.1.0"
     exon            951..1178
                     /gene="Ap5m1"
                     /gene_synonym="Mu5; Mudeng; RGD1308087"
                     /inference="alignment:Splign:2.1.0"
     exon            1179..1318
                     /gene="Ap5m1"
                     /gene_synonym="Mu5; Mudeng; RGD1308087"
                     /inference="alignment:Splign:2.1.0"
     exon            1319..1404
                     /gene="Ap5m1"
                     /gene_synonym="Mu5; Mudeng; RGD1308087"
                     /inference="alignment:Splign:2.1.0"
     exon            1405..1523
                     /gene="Ap5m1"
                     /gene_synonym="Mu5; Mudeng; RGD1308087"
                     /inference="alignment:Splign:2.1.0"
     exon            1524..1620
                     /gene="Ap5m1"
                     /gene_synonym="Mu5; Mudeng; RGD1308087"
                     /inference="alignment:Splign:2.1.0"
     exon            1621..2999
                     /gene="Ap5m1"
                     /gene_synonym="Mu5; Mudeng; RGD1308087"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgagattccg ggtgcaggtt cttaagacct tctgaggagt gttttacctt cctggaggga
       61 ccaggagact tgagtcacct cacccggaag agcgagcatc tccagtgagc tcttgcggcg
      121 ccgggagaac cccgacgttg cgtggtagag tcctttcaga aggcggggtc tactctggct
      181 ggatggcgac cttagtttct gtactgctct gatacttgag tggcttaacc atggccctgc
      241 gggcagtgtg gctcatacgt cacgaaccag gaactccact tggtggcacc gtcaaattct
      301 ccagacgcta tcctactgtt gaaaagcgag cgaaggtctt caatggaatg aattatgttc
      361 ctgtacctga agacggtccc tttcttaaag cattgctctt tcaacttaga ttattggatg
      421 atgataagga cttcgtggaa agccgtgata gctgttcaaa catcaataaa acatccatct
      481 atgggctctc agtaggaggt gaagatctct ggccagtcat tgctttcctg aggaatgaca
      541 tgatctatgc aagtgttcca ttagttgaac aagctctgtc ccctcgccca cctttaatta
      601 gtattagtgg ggtgtcacaa ggcttggaac tgcttttggg agtacatgat tttctttact
      661 ccagtcagaa aaacgacact gacctccaca gcagactgag tcagttgcct gacttgcttc
      721 tgcaggcttg tcctttgggg actctattgg acgctaactt gcagaactca ctgaatagcc
      781 ttaacttcgt atctgtgact cagccacaaa aacagccagc ctggaaagtt ggaacataca
      841 aaggaaaagc acagatttct atttctatca ctgagaacgt aaaatccatg caatatggta
      901 aacaggatat agcagacaca tggcaggtcg ttgggacagt cgcttgcaag tgtgatttgg
      961 agggagtcat gccaaatgtc accatcagct tgaatctgcc caccaatggg tctccacttc
     1021 aagacattat tgttcatcct tgtgtgactt ctctggattc tgccatcctg acctccagta
     1081 gcattgacac agtagatgac tctgctttca gtgggccata taaatttcca ttcactccac
     1141 ccttagagtc cttcaactta tgccactaca cttctcaggt tcctgtccca ccaatactgg
     1201 gttcttacca catgaaagaa gatggagcac aactgaaaat aacagttaat ttaaaactac
     1261 acgaaagtgt gcggaataat tttgaaatct gtgaagctca catacctttt tacaacagag
     1321 gtccaattac ccatttggaa tacaaagtta gttttggtca acttgaggtg tttcgagaaa
     1381 aaagcttatt ggtctggatt attggccaga agttccccaa atcaatggag attagccttt
     1441 caggaactct aactttcaga gttcagggcc ataacaggca gccgtttgac cacatttgta
     1501 ttggaagcac agcatatgta aagcttaatt ttaggattgc agattataca ctcaccggat
     1561 gttacgcaga tcagcattcg gttcaagtgt ttgcttcagg aaaaccaaaa ataagtgcat
     1621 atcggaaact aatttcttct gattattaca tctggaattc taaagcatct gctccagtaa
     1681 catatgcatc attgttacca tgactttttt catattcaaa gggatttata tgatggtaac
     1741 attctgtagt agaatcatag tattttaatt ttttacatgc gttcacacca cccatgactg
     1801 aaaaattaga gtgatttctt tatgaaaaca ttcacatttt atgttttcag tctggtgcag
     1861 tgtgaaagaa tattttcaag gctaacgtct ccctggtttt tgttaccctc taatttcagg
     1921 ccaccacgac tcagaatgta taaaagcagt ggttggcttt ggcctaagac tagtcctgag
     1981 tctgccacgc actccttcct tttccatggc aagacagtgc ttcagtcaga gccccttcct
     2041 tgaggaagag ctcggccttt cctggtgcag gttcaggcag ccatcctatg ggctgtagtc
     2101 gatttacaag gaaaatgtgt gcttacccaa acctcagtac agacagtgct gaatacccat
     2161 ggtctggtta agtaatcata aacggcttct ttcaaagcat ttgggaaaac gttcaaatag
     2221 taacctgctc ttcatctcat cccctaccgg ccaataggcc tccatagttc tgttttacgt
     2281 tctagagcta ctgtctttct gaaataggct ctcatgaagc ctgggctggc ctgggcctca
     2341 ctgtgtagct caggatgatc cctctcaagt gctggggtta cagtggtaaa ccaccatgtc
     2401 cagtgccctt ctagggatcg aactcagggc ctcatgcttg ccagaccagg acccaagagc
     2461 tgagccatga ctccactgct ctagggctgc cgtaaccaag gcagtagggt gacagaacag
     2521 ctgtccagga tgccagtaga cctaaggctg ccgcaatgag cctcgtgatc tgtgattacg
     2581 tagtgtccct ggacactttt agataattgt taagtattac agtgtttgtt tgtttgtttg
     2641 tttgcttaat taaactgtta atgaatgaac ttaggtaaac acccagaagc cttcctgtgg
     2701 gtatcattta gacttattta atatagcact tttttcttta agtctgtccc catcatttct
     2761 ttttatcatt ttcttgattc cttaaaaact gtcttcccat gctccttatc ctctcccatt
     2821 tccgcaattc cacaacatat ctttgttcaa agcagcatgc tgtcctcaaa tttggcttta
     2881 agtgactatt ttaaaaagtc tgaagatccc aggaacttaa ctgatgccaa atttagaagc
     2941 ctgacaaaaa tatgaattac agaataatat ttaattaaac ttactcgggg ttctgtttca
     3001 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     3061 aaaaaaaaaa
//
