LOCUS       NM_001107709            2921 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus adaptor related protein complex 4 subunit beta 1
            (Ap4b1), mRNA.
ACCESSION   NM_001107709 XM_001065231 XM_227538
VERSION     NM_001107709.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2921)
  AUTHORS   Matsuda,S., Miura,E., Matsuda,K., Kakegawa,W., Kohda,K.,
            Watanabe,M. and Yuzaki,M.
  TITLE     Accumulation of AMPA receptors in autophagosomes in neuronal axons
            lacking adaptor protein AP-4
  JOURNAL   Neuron 57 (5), 730-745 (2008)
   PUBMED   18341993
REFERENCE   2  (bases 1 to 2921)
  AUTHORS   Hirst,J., Bright,N.A., Rous,B. and Robinson,M.S.
  TITLE     Characterization of a fourth adaptor-related protein complex
  JOURNAL   Mol Biol Cell 10 (8), 2787-2802 (1999)
   PUBMED   10436028
REFERENCE   3  (bases 1 to 2921)
  AUTHORS   Dell'Angelica,E.C., Mullins,C. and Bonifacino,J.S.
  TITLE     AP-4, a novel protein complex related to clathrin adaptors
  JOURNAL   J Biol Chem 274 (11), 7278-7285 (1999)
   PUBMED   10066790
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474015.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_227538.4, XM_001065231.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2921
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..2921
                     /gene="Ap4b1"
                     /note="adaptor related protein complex 4 subunit beta 1"
                     /db_xref="GeneID:310746"
                     /db_xref="RGD:1310529"
     exon            1..513
                     /gene="Ap4b1"
                     /inference="alignment:Splign:2.1.0"
     CDS             401..2620
                     /gene="Ap4b1"
                     /note="adaptor-related protein complex AP-4, beta 1;
                     adaptor-related protein complex 4, beta 1 subunit"
                     /codon_start=1
                     /product="AP-4 complex subunit beta-1"
                     /protein_id="NP_001101179.1"
                     /db_xref="GeneID:310746"
                     /db_xref="RGD:1310529"
                     /translation="MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRHMTQGL
                     DMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCSDPNPMVR
                     GLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGAL
                     VNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEV
                     LNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFPHVQTDVLVR
                     VKGPLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE
                     VLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGNIAKTYTDQCVQILTELLGL
                     RQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLLGVHGEKI
                     PNAPYVLEDFVESVKSETFPAVKMELLTALMRLFLSRPAECQDVLGRLLLYCIEEEKD
                     MAVRDRGLFYYRLLLVGIDKTKQILCSPKSDPSLGLLEDQPERPVNSWASDFNTLAPV
                     YGKAHWATISKCQKIEPHRLELPHNASFATSGHLIAEENKEGAQEPPDSGALVLVPNL
                     QLTAECFEKTWLSLTVSYHQVLPWQGEVQPDTLQMALKVVNIQTIAMSKPGAQPWKAY
                     LSAQDGTGGLFLTELLLKPENSEVQISVKQSEARTEALRGFVSVLETVIGTVGDIKS"
     exon            514..738
                     /gene="Ap4b1"
                     /inference="alignment:Splign:2.1.0"
     exon            739..869
                     /gene="Ap4b1"
                     /inference="alignment:Splign:2.1.0"
     exon            870..1017
                     /gene="Ap4b1"
                     /inference="alignment:Splign:2.1.0"
     exon            1018..1514
                     /gene="Ap4b1"
                     /inference="alignment:Splign:2.1.0"
     exon            1515..1598
                     /gene="Ap4b1"
                     /inference="alignment:Splign:2.1.0"
     exon            1599..1702
                     /gene="Ap4b1"
                     /inference="alignment:Splign:2.1.0"
     exon            1703..1910
                     /gene="Ap4b1"
                     /inference="alignment:Splign:2.1.0"
     exon            1911..2192
                     /gene="Ap4b1"
                     /inference="alignment:Splign:2.1.0"
     exon            2193..2921
                     /gene="Ap4b1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcctcggaa tgtttcaggg tgacggggcg ggatttccgc aggaagctgg ctaggttgtt
       61 gtgtgatggc ctcggccact aaaactagat tccggggagc agactgtgct acgtctttgg
      121 cctttagctg gtcgagtata gaatacgtaa ctgggcccag agatacttga aaagatctgc
      181 tgggcagagc gaacggcctg cggatctagg gtcggggctt gcccaagggc ggaggggtga
      241 agtaagtgtt cggccctggg gcggggaccg cagagtgaca tcttgccttc agtgttttca
      301 ctgactacat ttcctttatt caggctccca catcgaaatt agaaggagcc cacgagttcc
      361 ctacgggtct gtggaaactg tcccgtgact gttggtgaag atgccatatc ttggctctga
      421 ggacgtggtg aaggaactga agaaggctct gtgtaaccct catattcagg ctgataggct
      481 gcgctaccgg aatgtcatcc agcgagttat taggcacatg actcagggct tggacatgtc
      541 tgatgttttc atggaaatgg tgaaggccag cgccactgta gatatcgttc agaaaaagtt
      601 ggtttatctg tatatgggca catatgcacc tttaaaacct gatctagcgc tcttggctat
      661 caatacactc tgcaaagact gctcagaccc caacccaatg gtgcgaggac tggcactacg
      721 gagcatgtgt agcctcagga tgcctggtgt acaggagtat atccagcagc ctgttgtcaa
      781 tggtctgcgg gacaaagctt catatgtcag aagagtggcc gtccttggct gtgccaagat
      841 gcataatctt catggagact ctgaagtaga tggtgctcta gtcaatgagt tatacagtct
      901 tctgcgtgac caggatccaa ttgtggttgt gaactgtctg aggtctctag aggaaatttt
      961 aaaacaggaa ggaggtgttg tcattaataa gcccattgcc caccatctct taaatagaat
     1021 gtcaaaactg gaccagtggg gccaggctga agtactgaac tttctgctcc gctaccaacc
     1081 ccgcagtgag gaggaactgt ttgatatcct caatttgttg gacagctatc tcaagagcag
     1141 cagcactggt gtggtgatgg gagccaccaa actttttctg attttggcaa aaaagttccc
     1201 ccacgtacaa actgatgtgc ttgtacgagt caagggaccc ttgctggctg cctgttcttc
     1261 agagagccga gagctctgct ttgctgctct ctgccatgtc cgccaggtct tgcatagttt
     1321 gccaggtcac tttagcagtc actacaaaaa gtttttttgc tcttactcgg agccccacta
     1381 tatcaagctg cagaaggtgg aggtgctgtg cgagctggtg aacgatgaga acgtgcagca
     1441 ggtgcttgaa gagctgcgag ggtactgcac tgatgtgtct gctgactttg cacaggctgc
     1501 catctttgct ataggtaata ttgccaagac ttacacagac caatgtgtgc agattctaac
     1561 agagttgctg ggacttcgac aagaacatat cactacagtg gtggtgcaga ctttccgaga
     1621 ccttgtctgg ttatgccctc agtgtactga agctgtgtgt caggccctgc ccggctgtga
     1681 ggagaacatt caagacagtg aggggaaaca ggcacttatc tggttacttg gggtccacgg
     1741 ggaaaaaatc cccaatgctc cttatgtgtt ggaggacttt gtagaaagtg tgaagtcgga
     1801 gacttttcct gctgttaaga tggagctgct gacggctctg atgcgccttt tcctctcacg
     1861 ccctgctgag tgccaggacg tgctgggacg tctgttgctt tactgcatag aggaagaaaa
     1921 ggatatggct gtacgagacc ggggtctctt ctattatcgc ctcctcttgg ttggcattga
     1981 taaaactaag cagatcctgt gtagtcctaa gtctgaccct tctcttggac ttttggagga
     2041 tcaaccagaa cgaccagtga atagctgggc ttcagacttc aatacgctgg cgccagtgta
     2101 tggcaaagcc cactgggcaa ctatctctaa atgccagaag atagagcctc atcgccttga
     2161 gcttccccac aatgcatcct ttgccacatc aggacacttg attgctgaag agaacaaaga
     2221 aggagcacaa gaacctccgg actctggagc tctcgtgctg gttcccaatc tccagcttac
     2281 cgctgagtgt tttgagaaaa catggcttag cctcacagtt tcttaccatc aggtgcttcc
     2341 ttggcaggga gaagtccagc ccgacactct acaaatggct ctaaaagtag tgaacattca
     2401 gaccatcgca atgagcaagc ctggggcaca gccctggaaa gcctacctca gtgctcagga
     2461 cggtactggt ggtctcttct taacggaatt gctgttgaag cctgagaact cagaagtgca
     2521 aatctctgtg aagcagagtg aggccaggac tgaagccctg cgtggtttcg tctctgtcct
     2581 ggaaactgtg attggaacgg ttggagacat aaaatcataa cagagtctgc tcttgccttg
     2641 ggtgagatgg aaagcatcag agccctcatt gtcttaaaca gctgcttgtg agtccttgga
     2701 tcagcttcga aagagaaggg aagtctggga atcccggctc ttatgtttac ccagtttcct
     2761 accttgttcc tttcaacctg tcaggaattg atcccatttt aaaaggagaa tgtatactgt
     2821 agtattggta ggggaaagat tggggtgaag atagaccggg gatatttctc tgttcatttt
     2881 aagggctgta atatttatta aataatgcct ggcatttgtg g
//
