LOCUS       NM_001107532            3767 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus adaptor related protein complex 3 subunit beta 2
            (Ap3b2), mRNA.
ACCESSION   NM_001107532 XM_001062218 XM_003748891 XM_003753302 XM_218859
VERSION     NM_001107532.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3767)
  AUTHORS   Larimore,J., Tornieri,K., Ryder,P.V., Gokhale,A., Zlatic,S.A.,
            Craige,B., Lee,J.D., Talbot,K., Pare,J.F., Smith,Y. and Faundez,V.
  TITLE     The schizophrenia susceptibility factor dysbindin and its
            associated complex sort cargoes from cell bodies to the synapse
  JOURNAL   Mol Biol Cell 22 (24), 4854-4867 (2011)
   PUBMED   21998198
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1 and FQ085944.1.
            
            On or before Aug 8, 2019 this sequence version replaced
            XM_003748891.3, XM_003753302.3, NM_001107532.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.3631.1,
                                           SRR26643299.3110.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-375               JAXUCZ010000001.1  144854058-144854432 c
            376-451             JAXUCZ010000001.1  144845735-144845810 c
            452-526             JAXUCZ010000001.1  144845528-144845602 c
            527-622             JAXUCZ010000001.1  144845116-144845211 c
            623-783             JAXUCZ010000001.1  144838747-144838907 c
            784-850             JAXUCZ010000001.1  144838323-144838389 c
            851-1033            JAXUCZ010000001.1  144838049-144838231 c
            1034-1317           JAXUCZ010000001.1  144837681-144837964 c
            1318-1372           JAXUCZ010000001.1  144837475-144837529 c
            1373-1444           JAXUCZ010000001.1  144837039-144837110 c
            1445-1507           JAXUCZ010000001.1  144834872-144834934 c
            1508-1640           JAXUCZ010000001.1  144834422-144834554 c
            1641-1750           JAXUCZ010000001.1  144833978-144834087 c
            1751-1927           JAXUCZ010000001.1  144832755-144832931 c
            1928-2114           JAXUCZ010000001.1  144828847-144829033 c
            2115-2233           JAXUCZ010000001.1  144827553-144827671 c
            2234-2342           JAXUCZ010000001.1  144827003-144827111 c
            2343-2460           JAXUCZ010000001.1  144826543-144826660 c
            2461-2641           JAXUCZ010000001.1  144825994-144826174 c
            2642-2702           JAXUCZ010000001.1  144825806-144825866 c
            2703-2809           JAXUCZ010000001.1  144825474-144825580 c
            2810-3038           JAXUCZ010000001.1  144825058-144825286 c
            3039-3123           JAXUCZ010000001.1  144824616-144824700 c
            3124-3221           JAXUCZ010000001.1  144824281-144824378 c
            3222-3360           JAXUCZ010000001.1  144822330-144822468 c
            3361-3745           JAXUCZ010000001.1  144821820-144822204 c
            3746-3767           FQ085944.1         1-22                c
FEATURES             Location/Qualifiers
     source          1..3767
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q31"
     gene            1..3767
                     /gene="Ap3b2"
                     /note="adaptor related protein complex 3 subunit beta 2"
                     /db_xref="GeneID:308777"
                     /db_xref="RGD:1308950"
     exon            1..375
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     CDS             263..3511
                     /gene="Ap3b2"
                     /note="adaptor-related protein complex 3, beta 2 subunit"
                     /codon_start=1
                     /product="AP-3 complex subunit beta-2"
                     /protein_id="NP_001101002.2"
                     /db_xref="GeneID:308777"
                     /db_xref="RGD:1308950"
                     /translation="MSAAPAYSEDKGGSAGPGEPEYGHDPASGGIFSSDYKRHDDLKE
                     MLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAE
                     EQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPY
                     VRKTAAHAIPKLYSLDSDQKDQLIEVIEKLLADKTTLVAGSVVMAFEEVCPERIDLIH
                     KNYRKLCNLLIDVEEWGQVVIISMLTRYARTQFLSPTQNESLLEENPEKAFYGSEEDE
                     AKGPGSEEAATAALPARKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPK
                     AEVGVIAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKI
                     LKLEVLTNLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNG
                     LVQLLSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLI
                     GEYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLTQYVLSL
                     AKYDQNYDIRDRARFTRQLIAPSEQGGALSRHAKKLFLAPKPAPILESSFKDRDHFQL
                     GSLSHLLNAKATGYQELPDWPEEAPDPSVRNVEVPEWTKCSNREKRKEKEKPFYSDSE
                     GESGPTESADSEPESESESGSKSSSESGSGESSSESDNEDDDEEKGEGSESEQSEEEG
                     EKKKKTKKKKASEGHREGSSSEEGSDSSSSSESEVTSESEEEQVEPASWRKKTPPSSK
                     STPAAKEISLLDLEDFTSPSVQPVSPPMVVSTSLAADLEGLTLTDSSLVPSLLSPVSS
                     IGRQELLHRVAGEGLAVDYAFSRQPFSGDPHMVSLHIYFSNNSETPIKGLHVGTPKLP
                     AGISIQEFPEIESLAPGESTTTVMGINFCDSTQAANFQLCTQTRQFYVSIQPPVGELM
                     APVFMSENEFKKEQGKLTGMNEITEKLTLPDTCRSDHMVVQKVTATANLGRVPCGASD
                     EYRFAGRTLTSGSLVLLTLDARGTGAAQLTVNSEKMVIGTMLVKDVIQALTQ"
     exon            376..451
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            452..526
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            527..622
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            623..783
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            784..850
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            851..1033
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1034..1317
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1318..1372
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1373..1444
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1445..1507
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1508..1640
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1641..1750
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1751..1927
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1928..2114
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2115..2233
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2234..2342
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2343..2460
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2461..2641
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2642..2702
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2703..2809
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            2810..3038
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            3039..3123
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            3124..3221
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            3222..3360
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
     exon            3361..3746
                     /gene="Ap3b2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgtggaggg tgacacgggt gcctgggagt tctgagacac tggggcgggg caggcgctgt
       61 tcctccgtct tctgtccgct cactccaacc ctgcactccg cgggtggtgc cggtcccttt
      121 aagaacctta gcgctcggcc cagattgctg aatctgcgcg ctgcctccgc cgcgcagatt
      181 gcagctcagc agagctaggc gtgcatcccc ttcctcggcc caagcccaac ccggcctctc
      241 agccacccct cagcgcagat ccatgtcggc cgctcccgcc tatagcgaag ataagggcgg
      301 ctcagccggc cccggggagc cggaatatgg ccacgatccg gcgagcggcg gtatcttctc
      361 ctcggactac aagcggcatg atgacctgaa agagatgttg gacaccaaca aggattccct
      421 caagctggag gccatgaaga ggattgtggc aatgatcgcc cgggggaaga atgcctcgga
      481 cctgttccct gcagtggtga agaatgtggc ctgtaagaac atagaggtga agaagctggt
      541 ctacgtgtac ctggtccgat atgctgagga acagcaagac ctagctctac tgtccatctc
      601 tactttccag cgtggcctaa aggatcccaa ccagctgatc cgggccagcg cgcttcgtgt
      661 tctctctagc atccgtgtgc ccatcatagt ccccatcatg atgctagcca tcaaggaagc
      721 tgcctcggac atgtcaccct atgttcggaa aacagctgct catgccatcc ccaaactcta
      781 cagtttggat tctgatcaga aggaccagct gatagaagtc attgagaagc ttttggcaga
      841 caagaccacg ctggtggcag gcagtgtagt gatggccttt gaagaggtct gtccggaacg
      901 catcgacctg attcacaaaa actaccggaa gctctgcaac ctgctcatcg acgtggagga
      961 gtggggccag gtggtgatca tcagcatgct cacgcgttat gcacgaacgc agttcctgag
     1021 ccctacgcag aacgagtctt tgttggagga gaatcctgag aaggccttct atggctctga
     1081 ggaggacgag gccaaaggcc ctggatcaga ggaagcggcc actgcggcgc tgcctgctcg
     1141 gaagccctat gtaatggatc cagatcaccg gctgctgctg cggaacacca agccgctact
     1201 gcagagccgc agcgccgccg tggtcatggc ggtggcacag ctttacttcc acctggcgcc
     1261 caaggcagag gtgggcgtca tcgccaaggc tctcgttcgc ctgctgcgca gccacagcga
     1321 ggtgcagtac gtagtgctcc agaatgtggc caccatgtcc atcaagcgca ggggaatgtt
     1381 tgaaccctac ttgaagagct tctacattag gtccacggat cctacccaga tcaagatcct
     1441 gaagctggaa gtgctgacca acctggccaa tgagaccaac atccccactg ttctacggga
     1501 attccagacc tacattcgca gcatggacaa agactttgtg gcggccacga tccaggccat
     1561 cggacgatgt gcaacgaaca taggccgagt ccgtgacacc tgcctcaatg gcttggtgca
     1621 gcttctgtcc aaccgtgatg agcttgtggt tgctgagtca gtggtggtca ttaagaagct
     1681 gctgcaaatg cagccagcgc agcacggcga gatcatcaaa cacttggcaa aactcacaga
     1741 caacatccag gtacccatgg cacgggccag catcctctgg ctcattggag agtactgtga
     1801 gcatgtgccc aagattgccc ctgatgttct gagaaaaatg gccaagtcct tcacagcaga
     1861 ggaggacatc gtgaagctgc aggtcataaa cctggcagcc aagctgtacc tgactaactc
     1921 aaagcagacc aagctcttga cccagtatgt gctgagtctg gccaagtacg accaaaacta
     1981 tgatatccgg gatcgagccc gcttcacccg gcagctcatc gctccttcag agcagggtgg
     2041 tgccctcagc cgccatgcca agaagctctt cctggcccct aagccagccc ctatcttgga
     2101 gtcatccttc aaagatcggg accatttcca actgggctca ctgtcccacc tactcaacgc
     2161 aaaggctaca ggctaccagg agctcccaga ctggccagag gaagccccag atccatctgt
     2221 gcgcaatgtg gaggtacctg aatggaccaa atgctcaaat cgggagaaga ggaaggagaa
     2281 ggaaaagcct ttctattctg attctgaggg ggagtctggc cccactgagt ctgcagacag
     2341 cgagcctgag tctgagagcg agtcggggag taagagcagc agtgagagtg gctctgggga
     2401 gtctagcagt gagtcggaca atgaagatga cgatgaagag aaaggcgaag gcagcgagag
     2461 tgaacagagc gaggaggaag gtgagaagaa gaagaagacg aagaagaaga aggcgtcaga
     2521 gggacacagg gaaggctcat cctcggagga gggcagtgac tccagtagta gctctgagtc
     2581 tgaggtgaca tcggagtcgg aggaagagca ggtagagcct gcctcctgga ggaagaagac
     2641 acctcccagc agcaaaagca cccctgcagc caaggagatt tccctgcttg acctagagga
     2701 cttcacctct cctagtgtcc agcctgtgtc tcctcccatg gttgtgtcca ccagtttggc
     2761 tgctgacctg gaaggtctga cacttacaga ctcgtctctg gtgccttcgc tgctgagtcc
     2821 agtgtccagc attgggaggc aggagctgct gcaccgggta gctggagagg gactggctgt
     2881 ggactatgcc ttcagccgcc agcctttctc tggggatccc cacatggtgt ctctgcatat
     2941 ctacttctcc aacaactccg agactccgat caaggggctg catgtgggca ctcccaagct
     3001 gcctgctggc atcagcattc aagaatttcc tgaaatcgag tccctggcac ctggagaatc
     3061 cactactact gtgatgggca ttaacttttg tgactcaacc caggcagcca acttccagct
     3121 gtgcacccaa acccgacagt tctatgtctc cattcagcca cctgtcgggg agctgatggc
     3181 ccctgtattt atgagtgaga atgagttcaa gaaggaacag ggaaagctga caggaatgaa
     3241 tgagatcaca gagaagctta cactgccaga cacctgtcgg agtgatcaca tggtggtgca
     3301 gaaagtgact gccactgcca acctaggtcg tgttccttgt ggggcatctg atgagtacag
     3361 gtttgcaggg aggacgctga ctagtgggag tctggtcctg ctgactctgg atgcccgggg
     3421 aactggagct gcccagctga ctgtcaacag tgagaagatg gtgattggca ccatgctggt
     3481 gaaggatgtg atacaggctc tgacacagtg actgctcagc actgttaccc actgatcttc
     3541 acccgatccc tccctgtgac atctgctcac agatctctcc cctcacctca acctagtgcg
     3601 agcacagtct ccctcccacc tgcttcctat gggtccctta gtgacttccc agaggaagac
     3661 agaagctgct ccttcatcaa cccctctcct cagttttctg tatgtactta cgtagcaaat
     3721 ctcaataaaa tgcgctctct cccttgaaaa aaaaaaaaaa aaaaaaa
//
