LOCUS       XM_002728280            2603 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus adaptor related protein complex 1
            subunit gamma 2 (Ap1g2), transcript variant X1, mRNA.
ACCESSION   XM_002728280
VERSION     XM_002728280.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 16, 2024 this sequence was replaced by
            NM_001427245.1.
            
            On Jan 21, 2021 this sequence version replaced XM_002728280.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2603
                     /gene="Ap1g2"
                     /note="adaptor related protein complex 1 subunit gamma 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 ESTs, 14 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 205 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:100362547"
                     /db_xref="RGD:2324507"
     CDS             154..2511
                     /gene="Ap1g2"
                     /codon_start=1
                     /product="AP-1 complex subunit gamma-like 2 isoform X1"
                     /protein_id="XP_002728326.1"
                     /db_xref="GeneID:100362547"
                     /db_xref="RGD:2324507"
                     /translation="MVPSLKLQDLIEEIRGAKTQAQEREVIQKECAQIRASFRDGDPL
                     QRHRQLAKLLYVHMLGYPAHFGQMECLKLIASPRFTDKRVGYLGAMLLLDERHDAHLL
                     ITNSIKNDLSQGIQPVQGLALCTLSTMGSAEMCRDLATEVEKLFQQPSPYVRKKAILA
                     AVHMIRKDPELSNIFLPPCTKLLRERHHGTLLGTITLITELCERNPAALRHFRKVVPQ
                     LVQILRTLVTTGYSTEHSISGVSDPFLQVQILRLLRILGRNHEESSETMNDLLAQVAT
                     NTDTSRNAGNAVLLETVLTIMAIHSAAGLRVLAVNILGRFLLNNDKNIRYVALTSLLQ
                     LVQSDHSAVQRHRSTVVECLQEKDASLSRRALELSLALVNSSNVRAMMQELQAFLESC
                     PPDLRADCASGILLAAERFAPSKRWHIDTILHVLTTAGTHVRDDAVANLTQLIGEAEE
                     LHTYSVRRLYSALAEDISQQPLVQVAAWCIGEYGDLLLEGNCEETEPFQVEEEDVLAL
                     LEKVLQSHMSLPATRGYAITALMKLSTRLQGDNNRIRQVVSIYGSCMDIELQQRAVEY
                     NVLFQKYDHMRAAILEKMPLVERSDPQVNEEGKEKQTGAQPLEATAPVPTQPQATKLL
                     DLLDLLDDTSGHAQRLPPLDPSPGEALINLLDLPCAPPTPAPIPSVRVFERKGLQLDL
                     SFMRPSETPALLLVTATTTNSSEEAVTHFVCQAAVPKSFQLQLQAPSGNTIPAQGGPP
                     ITQVFRILNPNKAPLRLKLRLTYNHSGQPVQEIFEVDNLPVETWQ"
ORIGIN      
        1 aagtaggctc agcaaggagg ccctagaggg gcgggtcccg tggtagaggc ggggaagagg
       61 gaagggcccg agcagcgcac caaccccagc tctgtcccat accaggaagt cctgggtagg
      121 gggtagaaga gcaaagctga caccggagcc aggatggtgc cttcgttgaa acttcaggac
      181 ctaatcgaag agattcgtgg ggccaagacg caggcccagg aacgggaggt gatccagaag
      241 gagtgcgccc aaattcgggc ctccttccgc gatggggatc ccctgcagag acatcgccag
      301 ctagccaaac ttctctacgt ccatatgttg ggctaccccg cccactttgg acagatggag
      361 tgcctgaaac tgatcgcctc ccccagattc acagacaaga gggtgggcta ccttggggcc
      421 atgctcctat tggatgagag acacgatgcc catctgctca ttaccaacag catcaagaat
      481 gacctgagcc aagggattca gccagttcaa ggcctggccc tgtgtactct gagtaccatg
      541 ggctctgctg agatgtgccg ggacctagcc accgaggtgg aaaagctgtt tcagcaaccc
      601 agcccctatg tgcgtaagaa ggctatcttg gctgcagtgc acatgatccg gaaggacccc
      661 gagctctcca acatcttcct cccaccctgt accaaactgc ttcgtgagcg ccatcatggc
      721 accctgctgg gcaccatcac gctgatcacg gagctctgtg aaagaaaccc tgcagccctc
      781 agacactttc gcaaggtagt gccccagctg gtacagatcc tccggactct ggtgacgaca
      841 ggatactcca cagagcacag tatctctgga gtcagcgacc ccttcttgca ggtccagata
      901 ctccgcctac ttcggatcct cggacggaac catgaagaaa gcagcgagac catgaacgac
      961 ttgctggccc aggtagccac caacacagac accagccgaa atgcaggcaa cgcagtcctg
     1021 ttggagacag tactgaccat catggccatc cactctgcag ctggcctccg ggttctagct
     1081 gttaacattc tcggtcgttt cttgctcaac aatgacaaga atatcaggta tgtagctctg
     1141 acatcgttgc tgcagctggt acagtctgac cacagtgctg tgcaacgtca ccggtccacc
     1201 gtggtagagt gtctacagga aaaggacgcc tcccttagca ggcgggccct ggagctgagc
     1261 ctggccctgg tgaatagctc caatgtgcga gctatgatgc aggagctgca ggcctttctg
     1321 gagtcctgcc cccctgatct tcgggctgac tgtgcctcag gcattctgtt ggctgcagag
     1381 aggtttgctc ccagcaagcg gtggcacata gacaccattc tgcacgtgct gaccacggca
     1441 ggcacccatg tgagggatga tgcagtggcc aacttgaccc agctgattgg ggaggccgag
     1501 gagctgcata cctactccgt gcgccgcctc tacagtgcgt tagcagagga tatctcccag
     1561 caaccactgg ttcaggtggc ggcctggtgt attggcgagt atggagacct cctgctggaa
     1621 ggtaactgtg aggagacgga gccttttcag gtggaagaag aggacgtgct ggcactactg
     1681 gagaaggtgc tccagtccca catgtccctg ccagccactc gaggctatgc tatcacggct
     1741 ctcatgaaac tcagcacccg gctccaggga gacaacaatc gtatccgcca ggtggtgtcc
     1801 atctacggga gctgtatgga catagagctt caacagcggg ctgtggagta taacgtactc
     1861 ttccagaagt atgaccacat gagggctgcc atcctcgaaa agatgcctct tgtggagcgc
     1921 agtgaccctc aagttaatga ggaagggaag gaaaagcaaa ctggggccca gcccttggaa
     1981 gcaacagccc ctgtccccac acaaccccag gccaccaaac tcttagatct gcttgatctc
     2041 ctggatgaca cttctgggca tgctcagcgc cttcctcctc tggacccttc cccaggggaa
     2101 gccttaatta atctcctcga ccttccctgt gcacctccaa ccccagctcc aatccccagt
     2161 gtcagagtgt ttgagcgtaa gggcctacag ctggatcttt ccttcatgcg gccctcggaa
     2221 acccctgctt tgctcttagt cactgccacc accaccaact cctcagagga ggctgttacc
     2281 cacttcgttt gccaggcggc tgtgcccaag agtttccagc tgcagttaca ggcccccagt
     2341 gggaacacaa ttccagctca gggtggtcct cccatcaccc aggtcttcag aatcctcaat
     2401 cctaacaagg cccctttgcg actaaagctt cgcctcacct acaaccactc tggccagcca
     2461 gtgcaggaga tcttcgaggt ggacaacttg cctgtggaga cgtggcagta acttactgtg
     2521 gtcagtgtct ggcctgggtt tctccaggct cttggtgtct cgttcaagaa atagaaataa
     2581 aggcacacgt aaattgcgaa gta
//
