LOCUS       XM_039096020            2590 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus acyloxyacyl hydrolase (Aoah),
            transcript variant X6, mRNA.
ACCESSION   XM_039096020
VERSION     XM_039096020.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096020.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2590
                     /gene="Aoah"
                     /gene_synonym="RGD1560514"
                     /note="acyloxyacyl hydrolase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     and 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 24 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:498757"
                     /db_xref="RGD:1560514"
     CDS             331..1479
                     /gene="Aoah"
                     /gene_synonym="RGD1560514"
                     /codon_start=1
                     /product="acyloxyacyl hydrolase isoform X5"
                     /protein_id="XP_038951948.1"
                     /db_xref="GeneID:498757"
                     /db_xref="RGD:1560514"
                     /translation="MKPPRKVFKTTLLFLLLSHSLASVPYESQPGASSSHGQNCVGCV
                     VVISLIEQLAEVHNSSVQVAMERLCSYLPEKLFLKPSCYFLVQTFGSDIIKLLGEAMK
                     ADVVCYALEFCKQDAVQSQCHLYSLPQEAWKSSLEKARQVLRKSSTMKYSRSGHNICS
                     LPFFTKICQKIELSMKKAVPFKDGDSDKYSVFPTLRGYHWRGRDCNDKDKTVYPGRRP
                     DNWDIHQDSNCNGIWGIDPKDGIPYEKKFCEGSQPKGIILLGDSAGAHFHIPPEWLTA
                     SQMSVKSFSNLPSALTDELNWPQLSGVTGFLDSTSGIEEKSIYHHLRKRNHCNHRDYQ
                     SISKNDISAVSSWREKLSEEDSRDWTEERCGGESGQSIAEMKTEKMRE"
ORIGIN      
        1 aacttgggta tttctttttc ctgaaggctt tactcagagg gactgtccac caaggacttc
       61 tctagctctt cccagatctg gacatctgag cctttctcca acatctcaga attgcctcag
      121 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgcg cgcgcgcgca
      181 catatgcaca tgctcacttg catcatactt gctgcacagt gtgttcatgg cagtgtgtat
      241 cagggtgtgg taactacaga ggggccaggc agggttgaga agtagcgtca tcttgtagcc
      301 aagatcatag ctccttgtac acagctcagg atgaagcccc ccaggaaagt cttcaagacc
      361 acccttctgt ttcttctgct ctctcactca ttggcctctg tgccctatga gagccagccg
      421 ggtgccagct cctcccacgg ccaaaactgt gtagggtgtg tggtggtgat atcattgatt
      481 gagcaactgg ctgaagttca caactcttca gttcaagtgg caatggagag gctctgcagc
      541 tacctacctg aaaagctgtt cttgaagccc tcctgctatt tcttggttca aacatttggc
      601 tcagacatca taaaactact cggtgaagct atgaaggctg atgtggtgtg ctatgctctg
      661 gaattttgca agcaggatgc tgtccaatca cagtgtcatc tctactcact tccccaggag
      721 gcctggaagt cctcactgga gaaggcgaga caagtcctca ggaagtcctc taccatgaaa
      781 tattctagaa gtggtcataa tatttgttcg ctaccatttt tcaccaagat ctgccagaaa
      841 attgaattat ctatgaagaa agctgtgcca ttcaaggatg gagattcaga caaatacagt
      901 gttttcccaa ctctgcgagg ctaccactgg cgagggcggg actgtaatga caaagacaag
      961 acagtgtacc cgggcagaag gccagacaac tgggatatcc atcaggattc caactgtaat
     1021 ggcatctggg gtattgatcc aaaagatgga attccatatg agaagaaatt ctgtgaaggt
     1081 tcacagccca agggaatcat tttgctggga gactcagctg gggctcattt tcacatcccc
     1141 cctgaatggc tgacagcttc gcagatgtct gtgaaatcct tctccaactt gccatcagca
     1201 cttactgatg agctcaactg gccccaactc tctggcgtta ctggatttct ggactccacg
     1261 agtggaattg aagaaaaatc catttaccat catttgagaa aaagaaacca ttgcaatcac
     1321 agagactacc agagtatctc aaaaaatgac atatcagcag tgagcagctg gagagagaaa
     1381 ctttcagaag aagacagtag agattggaca gaagaaagat gtggaggtga atctggccaa
     1441 agcatagcag aaatgaaaac tgagaagatg agagagtaga gaaggaaaaa tacaaaccac
     1501 ttaggtaaat ttgtaaaact gagattccac aggaaatgaa gaggatgaaa aataatgagg
     1561 actttgtacc agagagaatt ctgtacagga aaaaaaatag gcattaaaag aaagaacaag
     1621 taattccttg tttctttttt gtggttattt tgggttttgt gggggcttgt tattgtttat
     1681 tcgtttgtgt gttgagacag gacttcacta cccaggccag actggccctg aactctttac
     1741 tctgcttcca ggatgctggt atattacagg tgacaaccac ctccagctgt ggtgaatttt
     1801 taaatctact atgactactt tcatacaacg gcttggcaat ccttgtcctg aatagacaag
     1861 ggacttagat aatattgcct ctgactactt ttcactctta ttctcctgag gttgtgtggt
     1921 ggccagaaca tcaagttccc atatgtactc aaggttggct ggacctggtc ctataatttt
     1981 aggataacaa aagtttgagc tttccttgat ttttatttat cattatgaaa aacatttaag
     2041 aatgataaca cttcttgatt attatcctaa aaatgagaga ttaagagtct tggagaagaa
     2101 ttgaatgaag ggcctagcag atatgtcagc ttccataaca caacatcagc actgggttgg
     2161 caagagcttg ggcatttctt ccctctagaa gccagcagag agcaattgac tgcccagaga
     2221 gagtctctat tttaaggact cattattctg aatgtaagga tcttaaatgg gggcttccag
     2281 gaagatgtct ctcccagaga atccttttct ctgtctctct gatccttttg ggatagtttg
     2341 tctctttaga gacagataga tacttttccc tcacatctac taaattattt actcatctat
     2401 gacaacacac caatccaagg ggtcttgggt tctgttagta caacgccaag gaagcagaga
     2461 acccaggaag gtgagatcca agataacaca ccacagaaaa tcaccagaaa caagcaatcc
     2521 ccatcaccag tgtgacttgg acatccagtc atactcttgc atcaatggtg tcactgaaac
     2581 acattaacaa
//
