LOCUS       NM_001011918            2363 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus annexin A11 (Anxa11), mRNA.
ACCESSION   NM_001011918 XM_237959
VERSION     NM_001011918.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Lillebostad PAG, Raasakka A, Hjellbrekke SJ, Patil S, Rostbo T,
            Hollas H, Sakya SA, Szigetvari PD, Vedeler A and Kursula P.
  TITLE     Structure of the ALS Mutation Target Annexin A11 Reveals a
            Stabilising N-Terminal Segment
  JOURNAL   Biomolecules 10 (4), 660 (2020)
   PUBMED   32344647
  REMARK    GeneRIF: Structure of the ALS Mutation Target Annexin A11 Reveals a
            Stabilising N-Terminal Segment.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2363)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (bases 1 to 2363)
  AUTHORS   Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M and
            Stoorvogel W.
  TITLE     MHC class II-associated proteins in B-cell exosomes and potential
            functional implications for exosome biogenesis
  JOURNAL   Immunol Cell Biol 88 (8), 851-856 (2010)
   PUBMED   20458337
REFERENCE   4  (bases 1 to 2363)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   5  (bases 1 to 2363)
  AUTHORS   Nedjadi T, Kitteringham N, Campbell F, Jenkins RE, Park BK, Navarro
            P, Ashcroft F, Tepikin A, Neoptolemos JP and Costello E.
  TITLE     S100A6 binds to annexin 2 in pancreatic cancer cells and promotes
            pancreatic cancer cell motility
  JOURNAL   Br J Cancer 101 (7), 1145-1154 (2009)
   PUBMED   19724273
REFERENCE   6  (bases 1 to 2363)
  AUTHORS   Breen EC and Tang K.
  TITLE     Calcyclin (S100A6) regulates pulmonary fibroblast proliferation,
            morphology, and cytoskeletal organization in vitro
  JOURNAL   J Cell Biochem 88 (4), 848-854 (2003)
   PUBMED   12577318
REFERENCE   7  (bases 1 to 2363)
  AUTHORS   Satoh H, Nakano Y, Shibata H and Maki M.
  TITLE     The penta-EF-hand domain of ALG-2 interacts with amino-terminal
            domains of both annexin VII and annexin XI in a Ca2+-dependent
            manner
  JOURNAL   Biochim Biophys Acta 1600 (1-2), 61-67 (2002)
   PUBMED   12445460
REFERENCE   8  (bases 1 to 2363)
  AUTHORS   Satoh H, Shibata H, Nakano Y, Kitaura Y and Maki M.
  TITLE     ALG-2 interacts with the amino-terminal domain of annexin XI in a
            Ca(2+)-dependent manner
  JOURNAL   Biochem Biophys Res Commun 291 (5), 1166-1172 (2002)
   PUBMED   11883939
REFERENCE   9  (bases 1 to 2363)
  AUTHORS   Sjolin C, Movitz C, Lundqvist H and Dahlgren C.
  TITLE     Translocation of annexin XI to neutrophil subcellular organelles
  JOURNAL   Biochim Biophys Acta 1326 (1), 149-156 (1997)
   PUBMED   9188810
REFERENCE   10 (bases 1 to 2363)
  AUTHORS   Misaki Y, Pruijn GJ, van der Kemp AW and van Venrooij WJ.
  TITLE     The 56K autoantigen is identical to human annexin XI
  JOURNAL   J Biol Chem 269 (6), 4240-4246 (1994)
   PUBMED   7508441
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083812.1.
            
            On Feb 11, 2005 this sequence version replaced XM_237959.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083812.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p16"
     gene            1..2363
                     /gene="Anxa11"
                     /note="annexin A11"
                     /db_xref="GeneID:290527"
                     /db_xref="RGD:1309911"
     exon            1..55
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            56..118
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     CDS             64..1575
                     /gene="Anxa11"
                     /codon_start=1
                     /product="annexin A11"
                     /protein_id="NP_001011918.1"
                     /db_xref="GeneID:290527"
                     /db_xref="RGD:1309911"
                     /translation="MSYPGYPPPAGGYPPGAPGGAPWGGASYPPPSMPPIGLDNVANY
                     AGQFNQDYLSGMAANMSGTFGGANVPNMYPGAPGGGYPPVPPGGFGQPPPAQQPVPPY
                     GMYPPPGGNPPPGMPSYPAYPGAPVPGQPMPPPGQQPPGAYPGQPPMTYPGQSPMPPP
                     GQQPVPSYPGYSGSSTITPAVPPAQFGNRGTITDASGFDPLRDAEVLRKAMKGFGTDE
                     QAIIDCLGSRSNKQRQQILLSFKTAYGKDLIKDLKSELSGNFEKTILALMKTPVLFDV
                     YEIKEAIKGAGTDEACLIEILASRSNEHIRELNRAYKTEFKKTLEEAIRSDTSGHFQR
                     LLISLSQGNRDESTNVDMSLVQRDVQELYAAGENRLGTDESKFNAILCSRSRAHLVAV
                     FNEYQRMTGRDIEKSICREMSGDLEQGMLAVVKCLKNTPAFFAERLNKAMRGAGTKDR
                     TLIRIMVSRSELDLLDIRAEYKRMYGKSLYHDITGDTSGDYRKILLKICGGND"
     exon            119..231
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            232..618
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            619..706
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            707..801
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            802..915
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            916..1006
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            1007..1086
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            1087..1143
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            1144..1237
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            1238..1333
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            1334..1392
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            1393..1515
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
     exon            1516..2289
                     /gene="Anxa11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgagacttg gaggtagctg ctatccgagc tcagtgtccc ggtccctggt gccagcttta
       61 cccatgagct acccaggcta cccaccacct gctggtggct accctccagg tgcaccaggt
      121 ggtgctccct ggggaggtgc tagctaccct cctcccagca tgccccctat cgggctggat
      181 aacgtggcca actatgcagg gcagttcaac caggactacc tctcgggcat ggcagccaac
      241 atgtctggaa cattcggagg agccaacgtg ccaaacatgt atcctggggc tcctggaggt
      301 ggctatcctc cagtccctcc tggtggcttt gggcagcccc ctcctgccca gcagcctgtc
      361 cctccttatg gaatgtatcc accgccagga ggaaacccac ctcctgggat gccctcatac
      421 ccagcatacc caggggcccc ggtgccaggc cagcctatgc caccccctgg gcagcagccc
      481 ccaggagcct atcctggaca gcctccaatg acctatcctg ggcagtcacc aatgccaccc
      541 cctgggcagc agccagtgcc aagttaccca ggatactcag gatccagtac catcaccccg
      601 gctgtgcctc cagctcagtt tggaaacaga ggcaccatca ccgatgcttc tggatttgac
      661 cccttgcgag atgctgaggt cctgcggaag gctatgaagg gcttcggaac ggatgaacag
      721 gccattatcg actgcctagg gagccggtcc aacaagcagc ggcagcagat cctgctgtcc
      781 ttcaagacgg cctatggcaa ggatctgatc aaagacctaa agtcagagct gtcaggaaac
      841 ttcgagaaga ctatcctggc cctgatgaag accccggtcc tgtttgatgt ctatgagata
      901 aaggaagcta tcaagggggc tggtactgat gaagcctgcc tgattgagat cctggcttcc
      961 cgaagtaacg agcacatccg ggagctaaac agagcctaca aaacagagtt caaaaagact
     1021 ttggaggagg ccattcgaag tgacacatca ggacacttcc agagactcct catctctctc
     1081 tctcagggaa accgtgatga aagcacaaac gtggacatgt cccttgtcca gagagatgtc
     1141 caggagctgt acgcagctgg ggagaaccgc ctgggaacag atgaatccaa gttcaacgca
     1201 attctgtgct cccggagccg ggcccacctc gtggcagttt tcaacgagta tcagaggatg
     1261 acaggccgag acatcgagaa gagcatctgc cgggagatgt ctggggacct ggagcagggc
     1321 atgctggctg tggtgaaatg cctcaagaac acccctgcct tctttgccga aaggctcaac
     1381 aaggctatga ggggagcagg aacaaaagac cggaccctga ttcgcatcat ggtgtctcga
     1441 agcgagcttg acctgctgga tatccgagca gagtataagc ggatgtacgg caagtcactg
     1501 taccacgata tcacgggaga cacttctggg gattatcgga agatcctgct gaagatctgt
     1561 ggtggcaacg actgagcggt ggcagtggct cacctgtgcc ccctgctggc cccctgctgg
     1621 cagtggccag gaaacgtccc gaagagcaca ccagtttccc ccaatctatc tagtacccac
     1681 aagtgcaccc cccagccatc cacccatccc caaagccatg accttttcct tctggtcccc
     1741 cctcatccac gtattgtgcc gaagggccca ggtgggccag gttctcaggt gaccatctcc
     1801 ctggccctca cagccccttg ctgtgcagaa ttgatgttta tctctcctgg ttcctacact
     1861 cattcctcgc tgcttgtggc taagactctt agctttgtta tagacgtgtg atttttgtat
     1921 ttttatttga aaactttttt taaccatcgc tgccagacag acgcatacaa gcatgcttac
     1981 tgtatacatg tttctggaga gaatggtagg tgagcgggcc acccgtcttt gcctaggaca
     2041 aaagggaggt cttgtaacgg tactgtggtg tctggtgaga atgtgtcatg agttttgttt
     2101 ttgccaaact cacactcttt tttagaagag gccagaaaat catttgttcc actttccatg
     2161 taaaaccatg caagaattaa agccaggccc cgtgccagtg gcagggatcc ttgtagtttg
     2221 gaatgtgcct taaacctgaa tgtctgtagc caaaagctgt ttccaaatta aagtcagcca
     2281 attctggaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2341 aaaaaaaaaa aaaaaaaaaa aaa
//
