LOCUS       XM_039094946            4305 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ANTXR like 1 (Antxrl1), transcript
            variant X1, mRNA.
ACCESSION   XM_039094946
VERSION     XM_039094946.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094946.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4305
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4305
                     /gene="Antxrl1"
                     /note="ANTXR like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 ESTs, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:364513"
                     /db_xref="RGD:1563190"
     CDS             1577..3493
                     /gene="Antxrl1"
                     /codon_start=1
                     /product="anthrax toxin receptor-like isoform X1"
                     /protein_id="XP_038950874.1"
                     /db_xref="GeneID:364513"
                     /db_xref="RGD:1563190"
                     /translation="MACFALILLLLLSLPPTFKTGSLRYHGPGWKLLHRLGKGFRNPY
                     QEHMRQNLPQDQLGDDCQSSFDLYLILDKSGSVAKNWIYIYSFAEGLVKKFTNPNMRL
                     SIITYSTEADVVLPLTSDRNEIHKSLLLLKNIEPQGLTHMQKGLIKANEQIQKSAARG
                     HRAVSVIVALTDGLLLLKPYLDTMEEAKKARKLGAIIYTVGVFMYSKQQLVNIANNPN
                     NNFGVDGGFAALDSVIDPLVSKSCAEVVARQPTYMCAKDAYQVNISGHEFDSISNVKQ
                     VTCRFTFSDSKVVDETPSDVSENSITCPGPSIQHEGEDISLQVSLNGGTSFIGKKIII
                     TNTNCWSPRPQGGTTKDTIIEPRIKDPDQVSTTSKQKAQSRPAFKWSWLLFLPALLVT
                     LLLLCCTWKLCIKPKEKPPLPPQQSEKEPEEESPPPTSPPAPDPVPAPSTSAPSPVPL
                     PVNTNPTVIVACCGCGNRGVQENLDTCCNYFHPSCHQMPLVWCHPKAQGGYPSFTVMK
                     PNCSQASCSQKFCLCSSRDCFHLEEPSYPTRIVLQPKEEYFNGPRARYSSKIRFQTNQ
                     ESPPATQSMYSKMCPPPKQEGYAFKSPQPPRPTRYTKSLSRMLPLLSPYTRQSVDSFS
                     HTYPYPPISKGPKF"
ORIGIN      
        1 ccggataccg ggaaagggaa taacactcga aatgtatata agaaatactc aagttaatta
       61 aaaaaaaaaa agaccactgt ctaagctatc tattccgtgg gaaaacccac aaaactatga
      121 caataagaac tatcatgaaa gatgggataa ggaatctaat gttgaaaagc cagtacccta
      181 catttgatca atttcaattc cttatttgag actgtcattt taaaaacaat aaaaaataag
      241 atttctggag actcagtgct atccctttta aaatttatct tgtagctcta ttctaacatt
      301 aataagaggg gaggttgtga ttctaaatga cttttatggg catacagaca taaaaaggaa
      361 agtgatctcc cttacagttt gggtggcttg aattcctttt gaatgcagtc gtgtggcact
      421 gtctctccac cccgtgcccc cctctgccac tctaggtagt tgatgaagaa gggtgaaggc
      481 acaggaagag cccacccaca cttctctctg aaccttgaca cgctggcaaa gctctggcca
      541 gagaacggca taaatgacat ccggtgagtg atgtcacaaa gggttccaca gcctcaagct
      601 cctcactgca gacactgtct cctcaagctc tgggcctcta cgaaggaagc ccatgccact
      661 agtgctgtga agaggcccaa gtcacaggga gagaccaccg gttaggactt tatgaccatt
      721 ccagttgagc cacgctgacg ttcctcagct ctggtgccac agcggatgga gaagcttcca
      781 aacgattcta ctctttccta gtcctggggt tttccaggtt tccctttcca gggggggacc
      841 tccccactcc accttaactg aggatctgac tcacttaacc tgagatcaca ataaaatggt
      901 tgtgttaagt catcaaggtt gggcagcctg tcactgacag tggatgaatg gactactccc
      961 acccacaggg gaccctgact gtcatacaca gccttcatgt ctttctgaag tcagacattg
     1021 cctgttgctt tcaggaccca catttagccc cccaccttcc acacacccac cccttggggc
     1081 tttggcctct tcacccacag actggtgagc tcagttacct aagttagcaa atatattggt
     1141 tccttgaggt ggtccctaag ggtgccctat gaagggccgc aatgtggaaa aggagtcctc
     1201 atctaaaact tctgcagagg tcctgtgact gtctcttggc actgtcacca tgaaggcact
     1261 gagcacaggg gcaggtcaca aagtcaccat gtcaaccttc ctgtcccatc ataaccctac
     1321 agtgttttgt cccaaggtgg gggaaggact tctcaggtag ttgagggaag gacaccccac
     1381 agcagctgcc tccccggtcc ctgtgccctg agtacgccag attgagtact acctggtggt
     1441 aggttagagg cagtaatcct tgcccctaag ttcaggcaga ggtggtggag aaagattcca
     1501 cgtgaccttc cacagcatcc caagagctag caaagtccca gggacagtca agaacgtgag
     1561 gagccacagt ccctgcatgg cttgcttcgc actcattctg ctcctgctcc tgtcgcttcc
     1621 tcccactttt aaaactggga gcctccgata ccatggtcct ggctggaaac tattgcaccg
     1681 cctgggcaag ggctttagaa atccttacca agaacatatg aggcaaaact tgccccagga
     1741 ccaattggga gatgattgtc agagttcttt cgacctctac cttatcctgg acaaatcagg
     1801 cagtgtggcc aagaactgga tctacattta ttcattcgca gagggtttgg tgaagaaatt
     1861 cacgaaccct aacatgcgac tctccatcat tacctactca acagaggctg acgttgtcct
     1921 gccactcacc tcagacagaa atgaaatcca caagagcctt ctcctgctta agaacataga
     1981 gcctcaagga ctcacacaca tgcagaaagg acttataaag gcaaacgaac agatccaaaa
     2041 atccgccgca agaggccaca gggcagtcag cgtgattgtt gctctaactg atgggctatt
     2101 gctgctaaag ccatatcttg acactatgga agaggccaaa aaagcccgga aattgggagc
     2161 gatcatctat accgtgggtg tttttatgta cagcaaacag cagttggtga atattgcaaa
     2221 caacccaaat aataattttg gggtcgacgg aggctttgct gccctggata gtgtcattga
     2281 cccacttgtg tccaagtcct gtgctgaagt agtagccagg cagcctacct acatgtgtgc
     2341 gaaagacgct tatcaagtaa acattagcgg acatgagttt gacagcataa gcaatgtgaa
     2401 gcaggttacg tgtagattca cgttcagtga ctccaaagtc gtcgatgaaa ctcccagcga
     2461 tgtgagtgaa aacagtataa cctgtcccgg accaagcata caacacgagg gagaggacat
     2521 ttctcttcaa gtcagtctga acggtggcac ctccttcatt gggaaaaaaa tcattataac
     2581 caataccaac tgctggagcc ctaggccaca gggaggtaca accaaagata caatcatcga
     2641 gccacggata aaagacccag accaagtcag cactacttcc aagcagaaag cacaaagccg
     2701 ccctgcgttc aaatggtcct ggctgctatt cctgccagcc ttgctggtga ccctgctctt
     2761 actgtgctgc acctggaagc tttgcataaa gcctaaggag aagccaccat tacctcccca
     2821 acagtcagag aaggagccag aagaagagag ccctcctcct acatcacctc ctgctcctga
     2881 tcctgttcct gctccttcta cttctgctcc ttctccagtc ccgttgcctg tcaacacaaa
     2941 ccctactgtg atcgtggcct gctgtggctg tggaaacaga ggggtgcagg aaaacctgga
     3001 cacatgctgt aactacttcc acccaagctg ccaccagatg ccattggtat ggtgtcatcc
     3061 caaagcacag ggaggctatc ccagcttcac tgtcatgaaa cccaactgct cacaggcctc
     3121 ctgcagtcaa aagttctgcc tttgctccag tagggattgt tttcacctcg aagaaccatc
     3181 ttaccctaca aggattgtcc ttcaacccaa agaggagtat ttcaatggcc cacgggcacg
     3241 ctacagctca aagatccgct ttcaaaccaa ccaagaaagt cccccggcta cacagtctat
     3301 gtactcaaag atgtgcccac ctcccaaaca ggagggctac gctttcaagt ccccacagcc
     3361 cccacgccca accaggtata ccaagtctct ctccaggatg ttacctctgc tctctcccta
     3421 tacccgacaa tctgtagact cctttagtca cacctatcct taccccccaa tctctaaagg
     3481 accaaaattc taagtttaag aggcttttgt ctattgcatt ggacacacgt atcaggtctt
     3541 acttagatct tagtgagaaa gctctggtgt gttgctgatc agagagtccc acgcctaggg
     3601 agatgctcac aatctgaggt aagctccctg gtcccacttc ctgccagtgt gttttcatct
     3661 ctctgcaaag gctgagacaa gcctgatctt tcacaaaggt ccttgtggca cagcccttcc
     3721 tgctctctaa agactctcct gaatccctct ccctaagttc tttcaaagac aagaagagtt
     3781 caagttttca tctggattgc acactcctgc tttccgtttc ttagattctt gaattttgaa
     3841 tgttttctgg gaggaaataa aacctcttct ggaagcaaga ctcctctttc tagatatgtc
     3901 atgtgcttcc ccatgcccgt gagagcctct gaacttgact ggatcaggca aacctcacct
     3961 gtgtgtcctt taaatcaggc ttccacaggc cacagtgttc aggcaaacag cacgcgtaca
     4021 ccatggctgt gtgatctcac agggaccaga tacaccaggg tgagggcata acaaggggcc
     4081 aaaggatctt ctgaagactc tgcagaaagg tcatgacaca ggttatcagt tgtaccaaat
     4141 cttgatagtt aattaaatgg cagccttcta cactccccat tatacccaga cagtgtactt
     4201 gaatttctct aaggcaaata caggcagaag tatgccacac cctgacttgt aagtggtatg
     4261 gattgaatct gtggataatt atgtgtgtat caccaccaac aacaa
//
