LOCUS       XM_039094752            3318 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus anoctamin 9 (Ano9), transcript variant
            X3, mRNA.
ACCESSION   XM_039094752
VERSION     XM_039094752.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3318
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3318
                     /gene="Ano9"
                     /note="anoctamin 9; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 ESTs, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:499287"
                     /db_xref="RGD:1560565"
     CDS             801..2615
                     /gene="Ano9"
                     /codon_start=1
                     /product="anoctamin-9 isoform X3"
                     /protein_id="XP_038950680.1"
                     /db_xref="GeneID:499287"
                     /db_xref="RGD:1560565"
                     /translation="MLPASPSSHTPLPYQVLRPMGRAALTGKLFHREYFGEKVALYFT
                     WLGWYTYMLVPAAVVGLIVFLSGFALFDSSQISKEICSADDIFMCPLGDNSRRYQRLS
                     EMCTFAKLTHLFDNEGTVIFAIFMALWATVFLEIWKRKRAREVQSWELYEWDEEEEEM
                     ALELINSPHYELKKHHHSYLSSTIILILSLFMICLMIGMAHLLVVYRVLAAALFSSFL
                     EQQVTTAVVVTGAVVHYVIIVIMTKVNKCVALKLCKFEEPRTFSEQESKFTVKFFILQ
                     FFAHFSSLIYIAFILGRINGHPGKSTRLAGLWKLEECHLSGCMMDLFIQMAIIMGLKQ
                     TLSNCIEYLYPLLAHKCRSVQAYRHGRKSKDPELAEWQRNYHMNPVNTFSLFDEFMEM
                     MIQYGFTTIFVAAFPLAPLLALFSNLVEIRLDAIKMVRLQRRLVPRKAKDIGTWLQVL
                     ETIGVLAVIANGMVIAFTSEFIPRVVYKYHYGPCRKNQTFTDDCLKDYVNHSLSVFYT
                     KDFQDHGRMEGQENVTVCRYRDYRNDHDYNLSEQFWFILAIRLAFVILFEHVALCIKL
                     IAAWFVPDVPQSVKNEVLEEKYQRIRGRMCFSSRSTDV"
ORIGIN      
        1 tccacagtga cacgcctact ccaacaaggc cacacccact ccaacagggc cacacccact
       61 tcaacagggc cacacctcct aatagagaga ctgtctgggc caagcatata ccatcacaga
      121 tacctcgatg ggggcaaaac aagacagact tgtgtggggg ggggattgcc ctgtgttcac
      181 aagttgacta tctcaggcac ttaagctgta tctgagtatg gctccacaag agcctgtgtg
      241 gcctcaggca agttacccta acctctgaac atcagtttcc acagaagcag aatcactcat
      301 agacatgtaa acagaatccg aattgtgaac tttgtcgtga acagcaagaa gagactcagt
      361 ggtgagctca gatgggcagg tcggtggctg aggagggtgc tgctgtgggc tggattctcc
      421 tatcctccat tgctttctga ttgaggcacc ctataaccct agacaccttt gaggatctgg
      481 tgaaggatgg ggtttttgag accatgtttc ttctgcacaa ggtgaggggt agaccagctc
      541 agaatgggcc tgagggtggg gatctgaggt aggaagccaa gctctcattg tctgtgtccg
      601 gtacccaggg ggaagaggac ctgagcagag aatgggctca gtggagaaat gtgttccagc
      661 cacagccaat tgataaaatc aggtaatacc acaccgagca gctcacctgt gggccacaga
      721 cacatctgtg tttaaagcag ataacctggg gcccagccaa tccagtccta actcacagag
      781 acagtccccc acttacaccg atgctaccag cttcaccttc ttctcacaca cccctaccct
      841 accaggtact gaggccaatg gggagggcgg ccttgacggg gaagcttttc cacagggaat
      901 actttggaga gaaggtggct ctgtacttca cctggcttgg ctggtacacc tacatgctcg
      961 tgcctgctgc tgtggtgggc ctcatcgtct ttctgagtgg ctttgccctg tttgattcca
     1021 gccagatcag caaagagatc tgtagtgccg atgacatctt catgtgccct ctcggcgaca
     1081 acagtcgcag ataccagcgg ctctcagaga tgtgcacttt tgcaaagctc acgcatctct
     1141 tcgacaacga gggcactgtg atatttgcca tctttatggc tctgtgggct acggtcttcc
     1201 tggagatctg gaagcgaaag cgtgcccgtg aggtccagag ctgggaactg tatgagtggg
     1261 atgaggaaga ggaagagatg gccctggagc tcatcaactc tccgcattat gagctgaaaa
     1321 agcaccatca ttcctatctg agcagcacta tcatcctgat cctgtccctg ttcatgattt
     1381 gtttgatgat tggcatggct catttgctgg ttgtctaccg agtgctggct gctgccctct
     1441 tcagcagctt cctggagcag caggtgacca ccgctgtggt ggtgacaggg gcggtggtac
     1501 attatgtaat catcgtcatt atgactaagg tcaacaaatg tgtagccctg aagctttgta
     1561 aattcgagga acccaggacc ttttcagagc aagagagcaa gttcactgtc aagttcttca
     1621 tcctgcagtt cttcgcccac ttctcctcgc tcatttacat tgccttcatt ctgggcagga
     1681 tcaatggtca ccctgggaaa tccacgcgcc tggctggcct gtggaagctg gaggagtgcc
     1741 atctcagtgg ctgcatgatg gacctgttca tccagatggc catcatcatg ggcctgaagc
     1801 agacgctgag caactgcatt gagtacctgt acccgttgtt ggcccataaa tgccgctcag
     1861 tgcaggctta cagacatggt cgcaagtcca aagacccaga actggcggag tggcagcgga
     1921 actaccacat gaatccggtc aacaccttca gcctctttga tgagttcatg gagatgatga
     1981 tccagtatgg cttcaccacc atctttgtgg ccgcgttccc gctcgcgccc ctgttggcgc
     2041 tcttcagcaa ccttgtggag atccgcctgg atgccatcaa gatggtcaga ctacagcggc
     2101 gcctggttcc tcgcaaggct aaggacatag ggacctggct gcaggtactg gagaccattg
     2161 gagtgctggc agtcattgcc aatggaatgg tcattgcctt cacctccgag ttcatcccca
     2221 gagtagtcta caagtaccat tatggcccgt gcagaaagaa tcagaccttc acagatgact
     2281 gcctcaagga ctatgttaac cacagcttat ctgtcttcta caccaaagac ttccaggacc
     2341 atggcaggat ggaaggccaa gagaatgtga ctgtgtgcag gtaccgggac taccgaaatg
     2401 accacgacta caacctctct gagcagttct ggttcatttt ggccatccgg ctggcttttg
     2461 tcatcctctt tgagcatgtc gccctgtgca tcaagctcat tgctgcctgg tttgtgcctg
     2521 atgtgcccca gtcagtgaag aatgaggttc tggaggagaa gtatcagagg attcgtggaa
     2581 ggatgtgctt cagttccagg agcacggatg tatagacaac ccggggcagg tggagaaatg
     2641 ccgctttcca ggagcctgga ctaagaagaa gtccccacct ctacagtttg cctctgtcca
     2701 tagcaatgca tacgcatgtt ttgagggagg ctgtaaaatg gtccgtgtat atgtagggtc
     2761 ctggatggtc tacataaatg ttcgtgaatg aaggccatag gagggccttg aatatatgta
     2821 gatgtatata ggcatcctag gaagcccatg tatatgtgtt aatcacagga gactcttgta
     2881 tatgtcgggg gtccctgaaa tgccatgtat atttaggtta tttatgaaca gcacagatgt
     2941 gcctgtgggg tttgcttcaa cttttctggg gttcagattg gtacagacct gacttgaagc
     3001 tcctgagtga ccctagtacc catagaattg ctggctgctc ataaaaccct cgtgcagtga
     3061 aattagccca agttccatgg acctcctggc tcttgggcct cagatcttgc ctgctctgtg
     3121 gcctcttgct tggtagaagg tagagactaa cttccggccc ctccctcccc cacattaacc
     3181 tggatcccca cagccggcaa aacttttttt tttttttaaa gattttattt atttactgta
     3241 tgtatgtgag tacactgtca ctgtcttcag acacaccaga agagggcatc agatctcatt
     3301 acagatggtt gtgagcca
//
