LOCUS       XM_039094997            3792 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus anoctamin 8 (Ano8), transcript variant
            X1, mRNA.
ACCESSION   XM_039094997
VERSION     XM_039094997.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094997.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3792
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3792
                     /gene="Ano8"
                     /note="anoctamin 8; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 17 ESTs, 4 long SRA
                     reads, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 66 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:306340"
                     /db_xref="RGD:1563946"
     CDS             194..3619
                     /gene="Ano8"
                     /codon_start=1
                     /product="anoctamin-8 isoform X1"
                     /protein_id="XP_038950925.1"
                     /db_xref="GeneID:306340"
                     /db_xref="RGD:1563946"
                     /translation="MAEAASGAGDATLEGERGKRPPPEGEPAAPASGVLDKLFGKRLL
                     QAGRYLVSHKAWMKTVPTEDCDVLMTFPDTTDDHTLLWLLNHIRVGIPELIVQVRHHR
                     HTRAYAFFVTATYESLLRGADELGLRKAVKAEFGGGTRSFSCEEDFIYENVENELRFF
                     TSQERQSIIRFWLQNLRAKQGEALHNVRFLEDQPIIPELAARGIIQQVFPVHEQRILN
                     RLMKSWVQAVCENQPLDDICDYFGVKIAMYFAWLGFYTSAMVYPAVFGSVLYTFTEAD
                     QTSRDVSCVVFALFNVIWSTLFLEEWKRRGAELAYKWGTLDSPGEAVEEPRPQFRGIR
                     RISPITRAEEFYYPPWKRLLFQLLVSLPLCLACLVCVFVLMLGCFQLQELVLSVKGLP
                     RLVRFLPKVILALLVSVSAEGYKKLAVWLNDMENYRLESTYERHLIIKVVLFQFVNSY
                     LSLFYIGFYLKDMDRLKELLLLLSLTQSLERQLRAALVPLAALRFRLLLLSLRGLLLV
                     ARAKMLATLLITRQLLQNVREVLQPHLYRRLGSGELGLRTILELARALLGLLNPLRPD
                     PRRHLEAQADEGGAGSRRCLGGGCGAPEEEEEVAVERRPAGEGGEVPEGPRGGKEEDE
                     EEDDDDEDEDEEYEGEEGSLLDCGLRLKKVSFAERGAGRRRPGPSPDGLLEEGSPTMV
                     EKGLEPGVFTLAEEDDEPEAPPSSPGPEPQTVLLRRAGGEGRDQGSDGDRDPETGSGD
                     AAGRQKRHNRSSWIDPPEEEHSPQLTQAELESCMKKYEDTFQDYQEMFVQFGYVVLFS
                     SAFPLAALCALVNNLIEIRSDAFKLCTGLQRPFGQRVESIGQWQKVMEAMGVLAIVVN
                     CYLIGQCGQLQRLFPWLSPEAAIVSVVVLEHLALLVKYLIHAAIPDIPGWVAEEMAKL
                     EYQRREAFKRHERQAQQRFQQQQRRRREEEERQRHAEQQARRERDTGGREEARAEAPG
                     PDPAAERGAAKAKGSERPRRPGALLPPGPVLRLKQIIPLQTRPPAPTGCAPPPRSPAD
                     TRLPAFLSLRFLKAPERGPSPPRPGKLFAFAAREPAANGALGGGARSHRSAGDEPAAA
                     ELEPRPEDAGPASPPAGCWRWDAPWGCGDNPPRVPADAPARPAQPACWPTARH"
ORIGIN      
        1 gggaagaaga atcgaggttt ggctcgggcg gggacgacaa gcaagtggag cacagggacg
       61 gccggctgcg cgggcgggcg agagaggcct ttgtcttctc cagcgcgctc ggtggtgcca
      121 ctccggtccc catgagcccg cggccccccg gcgcccgggc gtcccgcagc ccctaacctg
      181 ccttatcctc gccatggccg aggcggcttc gggcgccggg gacgcgaccc tggaggggga
      241 gcggggcaag aggcccccac ccgagggcga acctgcggcg cctgcgtctg gagtcctgga
      301 taaactattt gggaagaggc tcctgcaggc tggccgctac ctggtatccc acaaggcatg
      361 gatgaagaca gtgcccaccg aggactgcga cgtgctcatg accttcccag acaccactga
      421 tgaccacacg ctgctgtggc tgctgaatca catccgggtg ggcattcccg agctgatcgt
      481 gcaagttcgc caccaccgcc acacgcgtgc ctatgccttc tttgtcaccg ccacatacga
      541 gagcctgctc cgtggggccg acgagctggg tctgcgcaag gccgtgaagg ccgagtttgg
      601 agggggcact cgcagcttct cctgcgaaga ggacttcatc tacgagaatg tggagaatga
      661 gctacgcttt ttcacatcgc aggagcggca gagcatcatt cgcttctggt tgcagaacct
      721 acgagccaag cagggggagg ctctgcacaa cgtgcgcttc ttggaggacc agccaatcat
      781 tccggagctg gctgcacgag gcatcataca gcaggtgttt ccagttcacg agcagcgtat
      841 tctgaatcgt ctcatgaagt cctgggtgca ggccgtgtgt gaaaaccagc ctttagatga
      901 tatctgtgac tattttgggg tgaagattgc tatgtatttt gcctggctgg gcttctacac
      961 atcagcaatg gtttaccctg ctgtctttgg ctctgttctg tatacattca ctgaagctga
     1021 tcagacaagc cgggatgttt cctgtgtggt ctttgctctc ttcaacgtga tctggtcaac
     1081 actgttcttg gaggagtgga aacggagggg ggcagagcta gcctacaagt ggggtacact
     1141 agactcacct ggggaggctg tggaggagcc acgtccccag ttcaggggca tccggcgcat
     1201 cagccccatc acccgtgctg aggagttcta ctacccgccc tggaagcgac tgctctttca
     1261 actgcttgtc agcctgcctc tgtgcctggc ctgtctcgtc tgtgtctttg tcctgatgct
     1321 tggctgcttc cagctgcagg agctagtctt gagcgtgaag ggtctgcccc gcctagttcg
     1381 cttcttgcct aaggtcatac tagccctgct ggtcagcgtg agtgctgagg gctacaagaa
     1441 gttagctgtg tggctaaatg acatggagaa ttaccggcta gagagcacct acgagaggca
     1501 ccttatcatc aaagtcgtct tgttccagtt tgtcaactcg tacttgagtc tgttctacat
     1561 cggcttctac ctcaaagaca tggaccgcct gaaagagctc ctgctactcc tgtccctgac
     1621 ccagagcctc gagcggcagt tgcgggcggc gctggtcccg ctcgcggccc tgcggttccg
     1681 cctgctcctc ctgtccctcc ggggtctcct gctcgtggcc cgggccaaaa tgctggccac
     1741 cctgctcatc acccggcagc tgctgcagaa tgtgcgtgag gtgctgcagc cgcacctgta
     1801 ccgcaggttg ggcagcgggg agctgggcct gcgcaccatc ctggagctgg cccgggccct
     1861 gctaggcttg ctcaacccct tgcgcccgga cccccgacgg cacttggagg cccaggctga
     1921 tgagggcgga gcggggagcc gcaggtgcct gggcggtggc tgcggggcgc ccgaggagga
     1981 ggaggaggtg gctgtggaga ggaggccagc aggggaaggt ggggaggttc cagaagggcc
     2041 tcggggtggc aaggaagagg acgaggagga ggacgacgac gacgaggatg aggacgagga
     2101 atatgagggc gaggaaggaa gcctcctgga ttgcgggctg cgcctcaaga aggtcagctt
     2161 tgctgagcgg ggcgcagggc ggcgcaggcc aggcccaagc cccgacggcc tcctggagga
     2221 ggggagtccc accatggtgg agaaggggct ggagcctggt gtgtttacgc tggccgaaga
     2281 agacgatgag ccggaggcgc ctccaagcag ccccgggcca gaaccccaga ccgtcttgct
     2341 tcgtcgggcg ggtggcgagg gccgcgacca aggatctgat ggagaccgag atccggagac
     2401 tggctctggc gatgcggccg ggagacagaa gagacataac aggtcctcgt ggatcgaccc
     2461 gccagaggag gagcattcac cgcagctcac acaggcagag ctggagagct gcatgaagaa
     2521 gtatgaggac acgttccagg actaccagga gatgttcgtg cagtttggct atgtggtcct
     2581 cttctcctct gccttcccac tggccgccct gtgcgccctt gtcaacaact tgattgagat
     2641 ccgaagtgat gccttcaagc tctgcactgg cctacagcgg ccctttggcc agcgtgtgga
     2701 gagcattggc cagtggcaga aggtcatgga ggcgatgggc gtgctggcca tcgtggtgaa
     2761 ttgctacctc attggccagt gtggccagct gcagcgcctg ttcccctggc tgagcccaga
     2821 ggcggccatt gtgtctgtag tggtgctaga gcacttggct cttctagtca agtacctcat
     2881 ccacgcagcc atccctgaca tccctggctg ggtggctgag gagatggcca aattggagta
     2941 ccagcgacgg gaagccttca agcggcacga acggcaggcg cagcagcgct ttcagcagca
     3001 gcagcggcga cggcgcgagg aggaagagcg gcagcggcac gcggagcagc aggcgcggcg
     3061 ggagcgcgac acgggaggcc gcgaggaggc gcgcgcggag gccccgggcc ccgaccccgc
     3121 ggcggagcgc ggcgcggcca aggccaaggg cagcgagcgt ccccgacggc ccggagcgct
     3181 gctgccgccc ggccccgtgc tgcggctgaa gcagatcatc ccgctgcaga cccggccgcc
     3241 cgcgcccacc gggtgcgcgc ccccgccgcg ctcgcccgcg gacacgcgcc tgcccgcctt
     3301 ccttagcctg cgcttcctca aagcgcccga gcgcggcccg tccccgccgc ggcccgggaa
     3361 gctgttcgcg ttcgcggcgc gcgagcccgc agccaacggg gccctcgggg gcggcgcgcg
     3421 ctctcacagg agcgccgggg acgagcccgc ggccgccgag ctggagccgc ggccggagga
     3481 cgcagggccc gcctcgcctc ccgccggctg ctggcgttgg gacgcgccct ggggctgcgg
     3541 cgacaacccg ccccgcgtcc ccgcggacgc ccccgcgcgc cccgcgcagc ccgcctgctg
     3601 gcccacagcc cgccactagc cccgctgcgc ccctgccgtt ccttcgacca ggatgggggc
     3661 cacgagcgga ccccccaacc cccacagtac agaaaagtac acaggatggg tggttattta
     3721 tttgttttta atttattttg tcatattttt gtaaaacggc agaaatgcaa taaaaagtct
     3781 atttcaacag tg
//
