LOCUS       XM_039106460            5982 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus anoctamin 3 (Ano3), transcript variant
            X1, mRNA.
ACCESSION   XM_039106460
VERSION     XM_039106460.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106460.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5982
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5982
                     /gene="Ano3"
                     /note="anoctamin 3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 24 ESTs, 8 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 23 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:311287"
                     /db_xref="RGD:1308873"
     CDS             162..3107
                     /gene="Ano3"
                     /codon_start=1
                     /product="anoctamin-3 isoform X1"
                     /protein_id="XP_038962388.1"
                     /db_xref="GeneID:311287"
                     /db_xref="RGD:1308873"
                     /translation="MVHHSGSIQSFKQQKGMNISKSEITTEASLKPSRRSLPCLAQSY
                     AHSKSLSQSASLFQSTESESQAPTSVTFLSADKPEHVTSEESRKDSTLKCSFADLSEF
                     CLALGKDKDYMDESEHANYDRSRLLNDFVTKDKPESKTKLSKNDMNYIASSGLLFKDG
                     KKRIDYILVYRKTNIQYDKRNTFEKNLRAEGLMLEKEPAVANPDIMFIKVHIPWDTLC
                     KYAERLNIRVPFRKKCYYTDQKNKSMSRVQKYFKRIKKWMSQNPMVLDKSAFPELEES
                     DCYTGPFSRARIHHFIINNKDTFFSNATRSRIVYHMLERTKYENGISKVGIRKLINNG
                     SYIAAFPPHEGAYKSSLPIKTHGPQNNRHLLYERWARWGMWYKHQPLDLIRLYFGEKI
                     GLYFAWLGWYTGMLIPAAVVGLCVFFYGLVTMNESQVSQEICKATEVFMCPLCDKNCS
                     LQRLNDSCIYAKVTYLFDNGGTVFFAIFMAIWATVFLEFWKRRRSILTYTWDLIEWEE
                     EEETLRPQFEAKYYRMEIINPITGKPEPHQPSSDKVTRLLVSVSGIFFMISLVITAVF
                     AVVVYRLVVMEQFASFKWNFIKQHWQFATSGAAVCINFIIIMLLNLAYEKIAYLLTNL
                     EYPRTESEWENSFALKMFLFQFVNLNSSIFYIAFFLGRFVGHPGKYNKLFERWRLEEC
                     HPSGCLIDLCLQMGVIMFLKQIWNNFMELGYPLIQNWWSRHKIKRGIQDASIPQWEND
                     WNLQPMNIHGLMDEYLEMVLQFGFTTIFVAAFPLAPLLALLNNIIEIRLDAYKFVTQW
                     RRPLPARATDIGIWLGILEGIGILAVITNAFVIAITSDYIPRFVYEYKYGPCANHVKQ
                     NENCLKGYVNNSLSFFDLSELGIGKSGYCRYRDYRGPPWSSKPYEFTLQYWHILAARL
                     AFIIVFEHLVFGIKSFIAYLIPDIPKGLRERIRREKYLVQEMMYEAELEHLQQQRRKS
                     GQPIHHEWP"
ORIGIN      
        1 ttcagagcta agtgctggct aaagcaggtg tcagattgcg acgagctagg tggctctggg
       61 attactcaga gcctcaggag tgtctctgga aagtctgact acaattgctc cgcatccctc
      121 tcggacagct cctcaactcc gctggaacag gcagagtgaa aatggtccac cactcaggct
      181 ccattcagtc ctttaaacag caaaaaggta tgaatataag caaaagtgag ataacaactg
      241 aagcttcttt aaaaccatct cggagatctc tgccctgtct ggctcagagc tatgctcact
      301 caaaaagctt gagtcaatct gcctcgctgt ttcagtcaac tgagagtgaa tctcaggctc
      361 caacctctgt gacatttctt tctgctgata aacctgaaca tgttacttct gaggagagta
      421 gaaaagactc tacccttaag tgttcctttg ctgacctcag tgagttttgc ttggctctgg
      481 ggaaagacaa ggattacatg gatgaatctg aacatgccaa ctatgatcga tctcgtctcc
      541 ttaatgactt tgttaccaaa gataaacctg aatccaagac aaagttatct aagaatgaca
      601 tgaattacat agcatccagt gggcttttat tcaaagatgg caaaaagaga attgattaca
      661 tcctggttta tcgaaaaaca aatatacaat atgacaaaag aaacacattt gaaaagaacc
      721 tgagagcaga aggcttgatg ttggagaagg agccagcagt tgccaatcct gacatcatgt
      781 ttattaaagt tcacattcca tgggacacac tgtgcaagta tgcagagagg ctgaacatca
      841 gggtgccctt caggaaaaaa tgttactata ctgaccagaa gaacaagtca atgagcaggg
      901 tacaaaagta tttcaagaga atcaaaaaat ggatgtccca aaacccaatg gttcttgaca
      961 agtcagcgtt tccagagctg gaggagtcgg actgctacac tggccctttc agcagagcca
     1021 ggattcacca ctttataata aacaataagg acaccttctt cagcaacgct actcgcagca
     1081 ggatagtcta tcacatgttg gaacgtacca aatatgaaaa cggaatatca aaagtgggta
     1141 ttcgtaagct tatcaataat ggctcataca tagcagcatt ccccccacac gagggagcct
     1201 acaagagtag ccttcccatc aaaacccatg gacctcagaa taacagacat ctgttgtatg
     1261 agcgctgggc acgctgggga atgtggtaca agcatcaacc tctggactta atcaggctgt
     1321 actttggtga gaagattggc ttatactttg cctggctggg atggtatact ggaatgctga
     1381 ttcctgctgc agtggtcggc ctatgtgttt tcttctacgg attagttaca atgaatgaaa
     1441 gtcaagtaag ccaagaaatt tgtaaagcca ccgaagtctt catgtgccct ctgtgtgaca
     1501 agaattgctc actgcagaga ctcaacgaca gctgcatcta tgccaaggta acatatttgt
     1561 ttgataatgg agggacagtc ttcttcgcta tttttatggc aatatgggcc actgtctttc
     1621 ttgagttttg gaaaaggaga agaagcatac tgacttatac atgggacctt attgaatggg
     1681 aagaagagga ggaaacactt cgtccccagt ttgaagcaaa atactacagg atggagataa
     1741 taaaccctat cacagggaaa cctgagcctc atcagccttc atctgacaaa gtcacacgac
     1801 ttcttgtgtc tgtctcaggg atcttcttca tgatctcctt ggtcatcaca gcagtgtttg
     1861 cagttgtggt gtaccgtctg gttgtcatgg agcagtttgc atctttcaag tggaatttca
     1921 tcaaacagca ctggcagttt gctacatctg gtgctgctgt ctgtatcaac ttcataatca
     1981 tcatgctgct gaatcttgcc tatgaaaaaa ttgcatacct cctcacaaat ttagaatatc
     2041 ctcgaacaga atcagagtgg gaaaacagct ttgctttgaa gatgttcctt ttccagtttg
     2101 tcaatctgaa cagttctatc ttctatattg cattcttttt gggaagattc gtaggccacc
     2161 caggaaaata caataaactt tttgagcggt ggagactgga ggaatgccat cctagcggct
     2221 gtctgataga cctctgcctc cagatgggcg tcatcatgtt tctgaagcaa atatggaaca
     2281 acttcatgga gctgggatat ccgttaatcc aaaactggtg gtcacgacat aaaatcaaac
     2341 ggggaatcca ggatgcttcc ataccacaat gggaaaatga ctggaacctt cagcctatga
     2401 acattcatgg gctgatggac gaatacttag aaatggtttt acagtttggt tttactacca
     2461 tctttgttgc tgcttttccc ctggcccctc ttttggcttt gttaaacaat atcatagaaa
     2521 tcagattgga tgcatataaa tttgtgaccc agtggaggag gcctctgcca gcccgagcca
     2581 ctgacatagg tatctggctt ggaattcttg agggaattgg catattggct gtgatcacca
     2641 atgcatttgt aattgctatt acatctgatt acatcccacg ttttgtctat gaatacaaat
     2701 acggcccttg tgcaaatcat gtaaagcaga atgaaaattg cctgaaggga tatgtcaaca
     2761 atagcttatc cttctttgac ctgagtgaac ttggtatcgg aaaatccggt tactgcaggt
     2821 accgagacta tagaggcccc ccttggagtt ccaaacccta tgagttcacc ttacagtact
     2881 ggcacatcct ggctgctcga ttggccttca ttattgtgtt tgagcatctt gtttttggca
     2941 ttaagtcatt cattgcatac ctgattccag atataccaaa gggcctccgc gagcgcatac
     3001 ggcgagagaa atacttagtt caagaaatga tgtatgaggc tgaactggaa catttacagc
     3061 aacagagaag aaaaagtggt cagcctattc accatgaatg gccttaggca gtacctgtta
     3121 cccaaaaggg gaggtaccat tagtgtgcag gaacgagaca cttgaaatgt agctaggatc
     3181 caagagaaag gcatacttgg caaactatat tgtaaaatgc tacttggaaa tacatcctag
     3241 aggtctatgt gatttagaat gctcagactt ctaaggaaat aaaggactcg tgacctccaa
     3301 agtgctgcaa cggaatggca ggcagccagg ctctgatgct cagagcaagc tttcagggga
     3361 gttctatgtt ttgaggccat tctgttccat tagctgcaga acaaatagga aacagagtgg
     3421 tggaatttcc agggacaagt tttcacataa atgttcataa gctggaaata ctaattggat
     3481 tctaggactt acacttaacc tcagatattt gcaagaaatg agtttaatca gttgttggct
     3541 ctgatgtcag aaccccatgt cccttcagct tacaggtttg tggagtcatc tttgtctcat
     3601 tgatataatg agtgtatgca catggcattt atgctgctct atgtcaacta tgcacttgaa
     3661 gagctgaaca tcactttagc agtcaatcca aaaatccaaa ttcccacaaa gagcaccact
     3721 gaaataattc cagtatattg gctgtgctca agtcttcttt atcactcaga gtcaagtgca
     3781 ctgcccattt ttgttaacaa atgccaataa ttctactttg aaattttgaa tgggtattct
     3841 tgtgtcatta gaacatgagt aattcatatt tcgctgcaga aacctacctt ctattcttat
     3901 attctatgtg cccctgtctg aatgattata aatctcacag aatgctatgt tgaaactttg
     3961 taaatatgcc aatgttcctt atatgtttgc acttttccac tgtgtaatat gagttacagt
     4021 tcattgagct ctacggccag ttacacagct actgtaatct gttcattcag gaaatccaaa
     4081 gccaaatgtt ctgcaacact tatgcttttt ctataacgtg cattctcaat tatgagctaa
     4141 tgaaaataat gcatgcatgg agtgtattat ttacataaaa aacctttcta tgtttcactt
     4201 tttcttcatg gaatggagat ttctgggttt tgatgagttg actctattga gtttcaaagc
     4261 tctctagaaa caagtcagtt tcattgtgaa gatcatagtt tagtttgtga tagattcctt
     4321 atttgaatgt tgactttatg tcacattaac agggcataaa tgaaaggata ttcaatgaaa
     4381 agaatctcag aggaaacatt atttaagggg acagaataca aagaaagtca ggggtgaagg
     4441 agcagggtat attgtagaaa tcaatacata ttcccttgca aaacaggaag atccattctt
     4501 ttttctctgt gtatagtgtg tgaaatcaca cagagaatac ataagcatat aacacacaca
     4561 cacatgaaga acacataaac acatatatac agaaaataca taagcacacg gaaagaacac
     4621 ataaacaaac acatgattat tatgatttct attatttgtt gtttggtttt gttcaattaa
     4681 gcaaaacaaa aatatttaca aaatataaaa tattagatta gccacacaca aaaaaataaa
     4741 taaaaaaaac cactttgcat tctctatcaa ggaaactctt ttcacttatt ggaagtacac
     4801 tgccccaatt ctaacagtta aaaagctctg tttatttgat tatgctgact ttatagtttc
     4861 ggccaaggat attcactttt cttctttccc tatgattctg agccaggcaa acagcctgag
     4921 aatctaacgt cttccacttg atctgggcat ggagctcagt ggcaatatat gtagcataca
     4981 tgcagaacat agagactcaa ccctcagcac cacaaaacaa acaaattaaa taaatgtaaa
     5041 tccaatgaag tatgacatga attccaacac agatccttct tcctgggact ctttcactac
     5101 aaatataatg gctgatttca tcagttatcg aataggattt tcaactcctc tgccttggag
     5161 catttgtgtc ccttttcttt gataaatgga tgtatccaca tacctgagca tattttgttt
     5221 acctaacatt tacatatttc ccaaaatagg gatgcaagac agacatgtgt gttatagtag
     5281 gacagacagt aacagccttt tccttgagaa ttctttttct agggttttct atacaccatt
     5341 ggggtttgaa taatattgat taatatgaac agagaaagat attttaatag gggttgtagt
     5401 atatttacaa aatatcttcc atgatatttt tgagatggat gggagaaaac agaaccaaaa
     5461 ataaattatc tggtgtgttt tgtttcttaa acagtgcaag acaatcaaac tttgtttcat
     5521 catcactgat agcaaaacac agacagcccc tcgcagtatg ttagcttatt agatcagtct
     5581 acttaagttg agagaaatgt tttgtaagtg ttttccatat gaatataaat tctttcttga
     5641 agatttatag cacacactat tctcaggaat tctgtatgac gtgaatgctg ctcacatatt
     5701 ttcatattct cacatgttgt ccttttatgc caacacctaa tggatacgtg catgcagtct
     5761 gccttgtcaa gttgtgtaaa ccattctggg tcttaactgt aatagctctc gatcatatga
     5821 gtctgtgtat gcacttttag gtgagccact gctgcctggc tgcatgatga aattcaactt
     5881 gaatgctaaa tgattcttgg cacaatccac tgtacaatgg aatgaataga aacttttttt
     5941 cactcaataa attatcattt ttactataac ttacacaatc ca
//
