LOCUS       XM_039082267            4811 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus anillin, actin binding protein (Anln),
            transcript variant X1, mRNA.
ACCESSION   XM_039082267
VERSION     XM_039082267.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082267.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4811
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4811
                     /gene="Anln"
                     /note="anillin, actin binding protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 98 ESTs, 4 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 98 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:363031"
                     /db_xref="RGD:1561367"
     CDS             240..3644
                     /gene="Anln"
                     /codon_start=1
                     /product="anillin isoform X1"
                     /protein_id="XP_038938195.1"
                     /db_xref="GeneID:363031"
                     /db_xref="RGD:1561367"
                     /translation="MDPFTEKLLERTRARRENLQRKMAERPTAAARSAPHAKRGREPL
                     SEASNQQQPLLAGGEEKSCTKPSPSKKRCSDKIEVEASDLENKEPVDAAKPCSPKPAP
                     RQMKPPAPAAISDSVAAPASLLSTGKASTTSSVKTRMQKLAEQRRHWDSEITDDVSES
                     SHFSPMPSEEKPASPSKPPVSNASATPVGRRGRLANLAATICSWEDDVSYSSAKQNSV
                     QEQPGTACLSKSSSASGPSASINSSSVQQEATCCSQRDGNASVKKDPTSNAADGPLLK
                     ASVSSPVKASSSPVRSAPFITRNCEVQSPELLHKTVSPLKTEVLKPCEKPTLSQALQP
                     KEGANKEVCLQSQSKDKLATPGGRGIKPFLERFGERCQEHSKESPTCRAFHRTPNITP
                     NTKAIQERLFKQNTCSSTTHLAQQLKQEREKELACLRGRFDKGSLWSAEKDEKSRSKQ
                     LETKQEVHCQNSPLKKHQIVSGTPSTSVSDKVAETPTAVKISGTEPAGSTESEMTKSS
                     PLKITLFLEEEKSLKVASDPEVEQKTEAVHEVEMSVDDEDINSSKVINDIFSDVLEEG
                     ELDVEKSQEEMDQVGTESSEEQEDVLNISSMSLLAPLAQTVGVVNLQNVISSPELELR
                     DSSLSAPSPKPGKFQRTRVPRAESGDSLSSEDRDLLYSIDAYRSQRFKETERPSIKQV
                     IVRKEDVTSKLSEKNGVFSGQVNIKQKMQELNNDINLQQTVIYQASQALNCCVDEEHG
                     KGSLEEAEAERLLLIATEKRALLIDELNKLKSEGPQRRNKTAVASQSGFAPSKGSVTL
                     SEICLPLKAEFVCSTAQKPESSNYYYLIMLKAGAEQMVATPLASTANSLSGDALTFPT
                     TFTLNDVSNDFEINVEVYSLVQKKDSSGPEKKKKASKSKAITPKRLLTSITSKSSLHA
                     SVMASPGGLSAVRTSNFTLVGSHTLSLSSVGDTKFALDKINFDVREQELLGYLFQEKV
                     PFLSPLEGHICLKISCQVTSTVEEKGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYP
                     DDERRKNPIGRINLANCISHQIEPANREFCARRNTLELITVRPQREDDRETLVSQCRD
                     TLCVTKNWLSADTKEERDLWMQKLNQVIVDIRLWQPDACYKPVRKP"
ORIGIN      
        1 ccccgcccac cccgcacgca tgcgcgccgt cccgggcgct gaaattcaaa ttttgaacgg
       61 ccgtggtagc ctaccgactc cggtgcggag ggcagagccg actgggtgtg ggagcgcccg
      121 tcgccttgac tccagctttc ctccaggggc tgcgccgagc ctgtactcac ttctttcctg
      181 ttcctgaact tgagccgtcg aacccaccgt ctagcagtcc actcgtgagg cttggggcga
      241 tggacccgtt caccgagaag ttgctagaac ggacacgtgc cagacgagag aatcttcaga
      301 gaaaaatggc tgagaggccc actgcagcag caaggtctgc acctcacgcg aagcgaggcc
      361 gagagccact ttcagaagca agtaatcagc agcagcccct actggcaggg ggtgaagaaa
      421 aatcatgtac aaaaccatca ccatcaaaaa aacgttgttc tgacaaaatc gaagtggaag
      481 cttcggactt agaaaataaa gaacctgttg atgctgcaaa gccttgttct ccaaagcctg
      541 cgccccggca gatgaagccc ccagcaccgg ctgccatcag tgattctgtg gctgccccag
      601 catcgctcct cagcacaggc aaagcatcca ccacctcctc agttaaaact cgaatgcaaa
      661 agcttgctga gcagcggcgc cattgggata gtgagatcac agatgatgta tcagaaagct
      721 cacacttctc accaatgcca tctgaggaaa agcctgcctc accttccaag ccacccgttt
      781 caaatgcctc agctacccca gttgggagaa ggggccgtct ggccaacctt gctgcaacga
      841 tttgctcctg ggaagatgat gtaagctact catctgcaaa gcaaaatagt gtacaagaac
      901 agcctggtac cgcttgttta tccaaatcct cctctgcaag tggaccatct gctagcatca
      961 atagtagcag tgttcagcag gaagctacat gctgttccca aagggatggc aatgcctctg
     1021 tcaagaaaga cccaacttca aatgctgccg atgggccttt gcttaaagcc tcagtgtcca
     1081 gccctgtgaa agcatcttct tcccctgtga gatccgctcc attcatcact agaaactgtg
     1141 aggtgcagag tcctgagcta cttcacaaaa ctgttagtcc tctgaaaaca gaggtgttga
     1201 aaccatgtga gaagccaact ttatcccagg cacttcagcc caaagaggga gctaacaagg
     1261 aagtttgtct acagtcacag tccaaggaca aacttgcaac accaggagga agaggaatta
     1321 agcctttcct ggaacgcttt ggagagcgtt gtcaagaaca cagtaaagaa agtccaactt
     1381 gcagagcatt tcatagaacc ccaaatatca ctccaaatac aaaagctatc caggaaagat
     1441 tattcaagca aaacacgtgt tcatctacta cccatttagc acagcagctc aaacaggagc
     1501 gtgaaaagga actggcgtgt ctccgtggcc gatttgacaa gggcagtctc tggagtgcag
     1561 agaaggatga aaagtcaaga agcaaacagc tagaaaccaa acaggaagtt cactgtcaga
     1621 actctcccct caagaaacac caaattgtct caggcacccc gtcgacctct gtgtcagata
     1681 aagtggctga gactccaacc gcagtgaaga tttctggtac agagcctgca ggttccactg
     1741 aaagcgaaat gacaaagtcc agccctttga aaataacatt gtttttagaa gaggagaagt
     1801 ccttaaaagt agcatcagac ccggaggttg agcagaagac tgaagcagtg catgaagtag
     1861 agatgagtgt ggacgatgag gatatcaaca gctccaaggt cattaacgac atcttcagtg
     1921 acgtcctaga ggaaggggaa ctggacgtgg aaaagagcca agaggagatg gaccaagtgg
     1981 gaacggaaag cagcgaggag caggaagatg tgctgaatat ctcctcaatg tctttacttg
     2041 ctccgctggc tcagacggtc ggcgtggtga atctacagaa tgtaatttct tcacctgagt
     2101 tggaattgag agactctagc ctgagtgctc caagtcccaa accaggaaaa ttccaaagaa
     2161 ctcgtgtccc ccgagccgaa tctggtgaca gcctcagttc tgaggaccgg gaccttcttt
     2221 acagcattga tgcatatagg tctcaaagat tcaaagaaac agaacgccct tccataaagc
     2281 aagtgattgt tcgaaaggaa gatgttactt caaaattgag tgaaaagaat ggtgtctttt
     2341 ctggtcaagt taatatcaaa caaaaaatgc aggaactcaa taatgacata aatttgcagc
     2401 agacagtgat ctatcaggcc agccaggctc tcaactgctg tgttgatgaa gagcacggga
     2461 aaggatccct ggaagaagct gaggcagaaa ggctccttct gattgcaact gagaaaagag
     2521 cacttctgat tgacgaactg aataagctga agagtgaagg acctcagagg agaaacaaga
     2581 ccgctgtcgc atcccagagt ggatttgccc catctaaagg gtcagtcacc ttgtcagaga
     2641 tctgcctgcc tctgaaggca gagtttgtct gcagcaccgc gcaaaagcca gagtcatcga
     2701 attactacta cttaattatg ctaaaagctg gggctgagca gatggtggcc accccattag
     2761 caagtactgc aaactctctt agtggtgatg ccctgacatt ccccaccacg tttaccctga
     2821 atgatgtttc caatgacttt gaaataaatg ttgaagttta cagcttggta caaaagaaag
     2881 attcctcagg ccctgagaag aagaagaagg cgtccaagtc taaggctatt actccaaaga
     2941 gactcctcac atctataact tcaaaaagca gccttcatgc ttcagttatg gccagtccag
     3001 gaggtctcag tgctgtgcgc accagcaact ttaccctagt tggatctcac acactatcgt
     3061 tatcttctgt tggagacact aagtttgctt tggacaagat aaattttgat gtaagagagc
     3121 aggagctact gggctatttg ttccaggaaa aggtaccttt tttgtctcca ttggaaggtc
     3181 acatctgctt aaagataagc tgtcaagtga cttcaactgt tgaggagaaa ggttttctta
     3241 ccatatttga agatgttagt ggctttggtg cctggcatcg aagatggtgt gttctctctg
     3301 gcaactgtat ttcttactgg acttacccag atgatgagag gcgaaagaat cccataggaa
     3361 ggataaatct ggccaattgt atcagtcatc agatagaacc agccaacaga gaattctgtg
     3421 caagacggaa cactctggaa ttaattactg tccgaccaca aagagaagac gaccgagaga
     3481 ctcttgtcag ccaatgcagg gacacactct gtgtcaccaa gaactggctc tctgcagaca
     3541 ctaaagaaga gcgggatctc tggatgcaga aactcaacca ggtgattgtg gacattcgcc
     3601 tctggcagcc ggatgcttgc tataagcctg tcagaaagcc ctgaacccag ggaacttcag
     3661 gaccgtggag agacttcgct agctgtgtta gaaagtgtcc aaggaagaca tggttagaag
     3721 caccagattt gcaagttgta ttttatgctt taaatataaa agggtatgtg caaatattca
     3781 ctacagatta tgcagtattt atatcttttc tatgtaaaac tttacccagt ttgtcttaca
     3841 tacatgttta actgtcaaat acttaaaata gtcaagagaa ttgatattca tgtttaatac
     3901 gttaagagtt tcattttata gaaacctcgc tagccattta ttcatgacaa agagtatata
     3961 ttataatcaa gttctgaatt gtatttggga gctgtgggtt ttaaggtccc ctgtaggtcg
     4021 taaacagaaa catgtagttt gatgagtccc tctccagcct cggtggtttt ttaaaaaggt
     4081 tgtggccatt cctggctcat gatatgacca gggtactgaa tgtaatctca gagggtttac
     4141 aggaatgtgt ttagtaagga gctgagaaga gacaacagat gcttactaat ctaataggaa
     4201 ctcaaagctg ctttctgaag agatgtggac agtgacacag tgacattggg gctaaatatt
     4261 gtaccagaag cattaagaat tacacagctc acattcactc cgactctgtg tgcagtgtgg
     4321 ggcagattgt cagtgttcag gctttattaa acagctattt ttcatgtagt ttaggatcct
     4381 cattaacatg ttcagccttt tctcttataa caagagcaaa tgtaaattga agaacacata
     4441 cataagaatt tctaccaagc tgctgtgact actcctttgc ttcccagagt tcttgtctcg
     4501 ttttcctttc atgttaatct aagacacttt acaaatctgt tttgagatca ctgaaaaata
     4561 tataaagcta tgcattccct ttaaagccca atgccttctt gcaatttaaa aatattacaa
     4621 tgcatggctg cagtttttaa atagtctgtg tttctcctct gactgtcagt tattgatggt
     4681 ttcatttata aacactaaat tctatcactt gccattatat ttcttactca tttaaatgtg
     4741 ggttttctta tgtatattat aaaagtattt tatgactcct acataaataa ataattgtga
     4801 attgtcaaaa g
//
