LOCUS       NM_001192012            1130 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus ankyrin repeat domain 7 (Ankrd7), mRNA.
ACCESSION   NM_001192012 XM_578232
VERSION     NM_001192012.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Cui,W., Dai,X., Marcho,C., Han,Z., Zhang,K., Tremblay,K.D. and
            Mager,J.
  TITLE     Towards Functional Annotation of the Preimplantation Transcriptome:
            An RNAi Screen in Mammalian Embryos
  JOURNAL   Sci Rep 6, 37396 (2016)
   PUBMED   27869233
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1130)
  AUTHORS   Shi,Y.Q., Du,L.C., Wang,Q.Z. and Han,C.F.
  TITLE     Ankrd7, a novel gene specifically expressed in Sertoli cells and
            its potential roles in Sertoli cell maturation
  JOURNAL   Mol Cells 27 (2), 199-203 (2009)
   PUBMED   19277502
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Oct 14, 2022 this sequence version replaced NM_001192012.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.2927936.1,
                                           SRR26360181.1345068.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-351               JAXUCZ010000004.1  48284469-48284819
            352-466             JAXUCZ010000004.1  48285768-48285882
            467-643             JAXUCZ010000004.1  48286036-48286212
            644-750             JAXUCZ010000004.1  48287016-48287122
            751-888             JAXUCZ010000004.1  48294090-48294227
            889-1130            JAXUCZ010000004.1  48302381-48302622
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q22"
     gene            1..1130
                     /gene="Ankrd7"
                     /gene_synonym="RGD1564660"
                     /note="ankyrin repeat domain 7"
                     /db_xref="GeneID:502733"
                     /db_xref="RGD:1564660"
     exon            1..351
                     /gene="Ankrd7"
                     /gene_synonym="RGD1564660"
                     /inference="alignment:Splign:2.1.0"
     CDS             110..949
                     /gene="Ankrd7"
                     /gene_synonym="RGD1564660"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 7"
                     /protein_id="NP_001178941.1"
                     /db_xref="GeneID:502733"
                     /db_xref="RGD:1564660"
                     /translation="MKKLFPFREKRKTDDSHSHSSDLSISLASTMPSLSTGGGYHLRD
                     KPLKKLHKAASVGNVQKLKDYLERKKYDVNGRDKRSRTPLHFACANGYTNIVSLLIEN
                     QCKINVQDSENRTPLIKQAAECQQESCATLLLHHGADPNLGDIYGNTALHYAVYGQNI
                     SLANKLLDYKANLEAKNKDGYTPLLLAVAENNENMVKFLLKKGADVNASDKNHRTAIM
                     IALIVEPTNSVKLLLQQDADLACEDIYGFTAEEYASFNGFTMYHQLIANNEKKKKTEQ
                     TAH"
     exon            352..466
                     /gene="Ankrd7"
                     /gene_synonym="RGD1564660"
                     /inference="alignment:Splign:2.1.0"
     exon            467..643
                     /gene="Ankrd7"
                     /gene_synonym="RGD1564660"
                     /inference="alignment:Splign:2.1.0"
     exon            644..750
                     /gene="Ankrd7"
                     /gene_synonym="RGD1564660"
                     /inference="alignment:Splign:2.1.0"
     exon            751..888
                     /gene="Ankrd7"
                     /gene_synonym="RGD1564660"
                     /inference="alignment:Splign:2.1.0"
     exon            889..1130
                     /gene="Ankrd7"
                     /gene_synonym="RGD1564660"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aactctggat ttggtcagat acagaagcag tcgtgaatga ggtgcttgcg gcagaggacc
       61 tgggctgttg gttaggattc ccaggaacgt cttaattaga gatcttacta tgaagaagct
      121 cttccccttc agggaaaaga ggaagacaga tgattctcac agccactcct cagacctgtc
      181 cattagccta gccagtacca tgcccagcct gtccacaggt gggggatatc atcttcgaga
      241 taagccctta aagaaactcc ataaagctgc ttcagttggc aatgtgcaga agctgaagga
      301 ttacctcgaa cgcaagaaat acgacgtgaa tgggcgggac aaaagaagca gaacaccttt
      361 gcatttcgcc tgtgctaacg gatatacaaa cattgtctct ctcttaattg agaatcaatg
      421 caaaattaat gtccaggata gtgaaaacag aaccccattg attaagcagg cagcagagtg
      481 tcaacaggag agttgtgcta ctcttcttct acaccatggt gcagatccaa atctgggaga
      541 tatttatggt aatactgctc tccattatgc tgtttatggc caaaatatct cattagccaa
      601 taaattgctt gactacaaag ccaatcttga agccaaaaat aaggatggct acaccccgct
      661 tttacttgct gttgctgaaa ataatgaaaa tatggtaaaa ttccttctga agaaaggagc
      721 cgatgtaaat gcatcagata aaaaccacag aacagccatc atgattgctc tgattgttga
      781 accaacaaat tctgtaaaac ttcttcttca gcaagatgca gacctagctt gtgaagatat
      841 ttatggattt acagctgagg aatatgcttc atttaatggc tttactatgt atcatcagtt
      901 aattgccaat aatgagaaaa agaagaaaac tgagcaaaca gctcactgag cagtttttct
      961 tgtcacttta tattttcttt caagaaggga agcagccttt tcctttcaaa gcagtaccta
     1021 actatggaat taaaattttc ctctctttta aaatcataaa tcatgttgaa gatcttcatt
     1081 aacattttct gataacccat ttaataaaaa ttaaaaattc tatgatgaaa
//
