LOCUS       NM_001109427            1269 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus ankyrin repeat domain 65 (Ankrd65), mRNA.
ACCESSION   NM_001109427 XM_001058618
VERSION     NM_001109427.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Boiko T, Vakulenko M, Ewers H, Yap CC, Norden C and Winckler B.
  TITLE     Ankyrin-dependent and -independent mechanisms orchestrate axonal
            compartmentalization of L1 family members neurofascin and
            L1/neuron-glia cell adhesion molecule
  JOURNAL   J Neurosci 27 (3), 590-603 (2007)
   PUBMED   17234591
  REMARK    GeneRIF: Ankyrin B is expressed along the entire lengths of axons.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On Oct 4, 2007 this sequence version replaced XM_001058618.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132292, SAMD00132297
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1269
                     /gene="Ankrd65"
                     /gene_synonym="RGD1562345"
                     /note="ankyrin repeat domain 65"
                     /db_xref="GeneID:680734"
                     /db_xref="RGD:1588232"
     exon            1..356
                     /gene="Ankrd65"
                     /gene_synonym="RGD1562345"
                     /inference="alignment:Splign:2.1.0"
     CDS             172..1269
                     /gene="Ankrd65"
                     /gene_synonym="RGD1562345"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 65"
                     /protein_id="NP_001102897.1"
                     /db_xref="GeneID:680734"
                     /db_xref="RGD:1588232"
                     /translation="MDSSRLKQELQWMKLVWEETPADKTDRPLTPQGWSTLFQAVWWG
                     APSLVMQLLRQGASVEERDHTGRTPLHLAVMRGHAPLVRLLLQRGALAGAVDHTGRTP
                     LHEAAWHGHSNVAELLLRRGASAAAPCSQTGLTPLHGAAALGRTLLVTCFTAAPDSVP
                     DVKDIRGWTATHWAAACGQLPVLELLTAGGSVDLDGALLVSAVAGSASALRLLLTLGA
                     KVDALDSTGATALGLAAGLGHHQEIEVLLGHGADPNIRDRNNRSALHRAASGGCLRAI
                     QLLVAKGTDVDARDSLGLTPLHYAARGGHREVVSHLLDRGAHVDAAGWLHKTPLHLAV
                     ECGHTTILELLLSRGANPSLRTQWGEVAQIP"
     exon            357..894
                     /gene="Ankrd65"
                     /gene_synonym="RGD1562345"
                     /inference="alignment:Splign:2.1.0"
     exon            895..1269
                     /gene="Ankrd65"
                     /gene_synonym="RGD1562345"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaagtcagag ctcctgtgcc agctccctct gtaggtaatt gggagccaca gcccttcaga
       61 aggctaaagg gtgtgagtcc ttctggtgga gtggtgacat ggtgacaagg gacaggtaag
      121 gtgaaccagc caggggcctt agtgtggacg caggtccctg ctctccccta gatggattcc
      181 agcaggctga agcaagaact acagtggatg aagctggtct gggaggagac cccagcagac
      241 aagacagaca gacctcttac acctcagggc tggagtactt tgttccaggc agtgtggtgg
      301 ggagctccca gcctggtgat gcagctgctg aggcaaggtg ccagtgtgga ggagagggat
      361 cacacaggta ggactccgct ccatctggct gtgatgcgag ggcacgcacc attggttcgc
      421 ctactgttgc agcggggggc cctggcaggt gcagttgacc acacagggcg cacaccactg
      481 cacgaggctg cctggcatgg gcactcgaac gtggcagaac tattgctgcg acgcggggct
      541 tcagcagctg ctccatgctc tcaaacgggc ctcacgcccc tgcacggggc agctgctctg
      601 ggccgcacgc tactggttac atgctttacg gcggctccag attcagtccc tgatgtgaaa
      661 gacataagag gctggactgc cacacactgg gcagcagctt gtgggcaact gccggtgctg
      721 gagctactga ctgctggagg cagtgtagac ctggacggcg ctctgctggt gtcagcggta
      781 gctggaagtg cgtcagcgtt gcggcttctc ctgacactgg gggcaaaggt ggacgccctg
      841 gacagtacag gagccaccgc acttggcctg gcagctggct taggccacca ccaagaaatt
      901 gaggtgctgc tgggccatgg ggcagaccca aatatcaggg acaggaacaa ccgctctgca
      961 ctccacaggg ctgccagtgg tggctgtcta cgtgctatac agctgctggt ggctaagggc
     1021 accgacgtag atgctcgaga ctctctgggc ctcacacctc tgcactatgc tgctcgggga
     1081 ggccacagag aagttgtcag ccatctcctg gacaggggtg cgcacgtcga tgctgctggt
     1141 tggctccaca agacccctct gcatcttgct gtagaatgtg gccataccac cattctggag
     1201 cttttgctga gccgaggagc caacccttcc ttgaggacac aatggggtga agtagcccag
     1261 atcccatag
//
