LOCUS       XM_039106735            1678 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin repeat domain 60 (Ankrd60),
            transcript variant X1, mRNA.
ACCESSION   XM_039106735
VERSION     XM_039106735.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106735.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1678
                     /gene="Ankrd60"
                     /note="ankyrin repeat domain 60; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:103691988"
                     /db_xref="RGD:9091054"
     CDS             8..940
                     /gene="Ankrd60"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 60
                     isoform X1"
                     /protein_id="XP_038962663.1"
                     /db_xref="GeneID:103691988"
                     /db_xref="RGD:9091054"
                     /translation="MRRAVDMARAGARPPKKHGDDPKAGARPAQPSSRARARIKGHTG
                     DPLASTASPDLTPDVYVLRVRLEETGELFRVANCRSDMTVRELKEELDLMVGIPFNLQ
                     RLHFLDQGILMDDATLKFYDVIPGAIISLCIWHYDGWTELVLAAVEGDPSKMSCLGIS
                     EDTFYRTANSQHFKGEQWRQWTAQRAFVALYVSAHRGHVDAVQYLLELGANCLAKSPL
                     GRTPLHVAAAMGRTECIQPLLEHGASIHDRDLKSETPVTIARRLKRGNFERKMFILYW
                     MIKSGTRDPDLVSRDASEKHSPGVMARKTSVLIS"
ORIGIN      
        1 gcgggccatg cggagggcgg tagacatggc gagggcgggc gcgcgtccgc caaagaagca
       61 tggggatgac cccaaggcgg gcgcgcgccc cgctcagccc tccagccggg cccgcgcgcg
      121 gattaagggg cacacagggg acccgctcgc ctccaccgcg tcgccagact tgacccctga
      181 cgtctatgtc ctgcgggtga ggcttgagga gactggagag ctgttccgcg tggccaactg
      241 ccgcagtgac atgacggtgc gggagctcaa agaagagcta gacctgatgg tcggcatccc
      301 cttcaacctg cagcggctgc atttcctgga ccaaggaatt ttgatggatg acgccacgct
      361 caagttctat gatgtcattc cgggagctat tatttcacta tgcatctggc actatgatgg
      421 ttggacggaa ctggttttgg ccgctgtgga aggggacccc agtaagatgt catgtcttgg
      481 tatcagtgag gacactttct accggacagc aaactcgcag cactttaagg gggagcagtg
      541 gaggcagtgg accgcccaga gggcgtttgt ggccttgtat gtctctgctc acagaggtca
      601 cgtggatgcc gtgcagtatc ttctagaact tggagcgaac tgcctggcca aatcacccct
      661 gggcaggaca cccctgcacg tggccgcagc catgggcagg acagaatgca tccagccctt
      721 actggaacat ggcgcctcca tccacgacag agacttgaag agcgaaacgc ctgtcactat
      781 cgcgcggcgc ctgaagcggg ggaatttcga gcgcaagatg ttcattctct actggatgat
      841 caagtctggg accagggacc ctgacttagt atcgagggat gcttcagaga aacacagccc
      901 tggggtcatg gcaaggaaga cctcagtgtt gatctcctga gtacctttgc ccgtcatgtg
      961 attctggggt gaccttatag cccccgttgt ggccccaccg tggtactctt tatggaacaa
     1021 agaaagggac agaactcaat cagacaccaa attggttgtc ctcttacaag agtctggggg
     1081 cggggggggg gaggagggtg taatggagca ggtgagtcca tctcctttgc aatccattct
     1141 gccccgcccc ccacccacca tgccgacaat gctagccttt aattttaagc tctttgtacg
     1201 ttggtgccca atcacaccgt ttggggtgat ggtagccaat tatccctccc ttcctcggcc
     1261 cttctaatgt accagcataa tgggagtaat aacaggaacg ataatagcgc ccctgttacc
     1321 gcggggagcg agcacggccg acgtcaggag gtcacaagca gagcaggttg tgaatttgtt
     1381 tgtcaaaccc acgtagctaa ccatttcctt ggcccgtcat gggacacagt gtaggctgag
     1441 ctagctctta ggggtctgcg gcctgagttc agggaagatg agaagccagg agtggggctt
     1501 gtaggcctcc aaacatagtc ttcttccaag gggttcattt cttatcctca tgggaaggag
     1561 gcatgtggtc ttccgtggga agaaaacagc ccaggaaaca gaagagagag agagagagag
     1621 agagagagag agagagagag agagagagag agagagagag agagagagag agagagac
//
