LOCUS       NM_001134969            4638 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus ankyrin repeat domain 6 (Ankrd6), mRNA.
ACCESSION   NM_001134969 XM_001056902 XM_575792
VERSION     NM_001134969.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4638)
  AUTHORS   Haribaskar,R., Putz,M., Schupp,B., Skouloudaki,K., Bietenbeck,A.,
            Walz,G. and Schafer,T.
  TITLE     The planar cell polarity (PCP) protein Diversin translocates to the
            nucleus to interact with the transcription factor AF9
  JOURNAL   Biochem Biophys Res Commun 387 (1), 212-217 (2009)
   PUBMED   19591803
REFERENCE   2  (bases 1 to 4638)
  AUTHORS   Katoh,M. and Katoh,M.
  TITLE     Identification and characterization of rat Ankrd6 gene in silico
  JOURNAL   Int J Mol Med 15 (2), 359-363 (2005)
   PUBMED   15647854
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473962.1.
            
            On or before Sep 15, 2008 this sequence version replaced
            XM_001056902.1, XM_575792.2.
            
            ##Evidence-Data-START##
            CDS exon combination :: BC168675.1 [ECO:0000331]
            RNAseq introns       :: mixed sample support SAMD00132261,
                                    SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..4638
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q21"
     gene            1..4638
                     /gene="Ankrd6"
                     /note="ankyrin repeat domain 6"
                     /db_xref="GeneID:500430"
                     /db_xref="RGD:1583731"
     exon            1..211
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            212..475
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     CDS             356..2497
                     /gene="Ankrd6"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 6"
                     /protein_id="NP_001128441.1"
                     /db_xref="GeneID:500430"
                     /db_xref="RGD:1583731"
                     /translation="MSQQDAVAALSERLLIAAYKGQTENVVQLINKGAKVAVTKHGRT
                     PLHLAANKGHLSVVQILLKAGCDLDVQDDGDQTALHRATVVGNTEILTALIREGCALD
                     RQDKDGNTALHEAAWHGFSQSAKLLVKAGANVLARNKAGNTALHLACQNSHSQSTRVL
                     LLGGSRADLKNNAGDTCLHVAARYNHLSVVRLLLSAFCSVHEKNQAGDTALHVAAALN
                     HKKVVKILLEAGADTTLVNNAGQTPLETARYHDNPEVALLLTKAPQILRFSRGRSLRK
                     RRERLKEERRAQSVPRDEVAQSKGSVSAGDTPSSEQAVPEKEEARRDCPPASQEPRKD
                     ERRRKSRPEVSALSDPTPAADQQPGHQKNLHGHHHQKKKSRHRCWSPPPPHGFRAYQL
                     YTLYRGEDGKVMQAPIKGCRCEPLINKLENQLEAAVEELRAELGTVQDKVNTKLGHME
                     SKSQHQMCVLDKLMVERLSAERTECLNRLQQHAAAEKQEGEKRQMSLVDELKSWCMLK
                     IQNLELRLSGESRTFRAKSTPSPSDSSPAVDQPVVAAGPGAASDSSSQVVRPKDKALN
                     ATAVPRHQQELLPSDCTGSGLRKVKAPAASRLGDQQTGSCVNRGTQTKKSARGGQTKH
                     RGQQPTASSPSGQQPSAASSDARDASQALELTQYFFEAVSAQMEKWYERKIEEARSQA
                     SQKAQQDEATLKEHIRSLEEEVAKLRTKMHK"
     exon            476..574
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            575..673
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            674..772
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            773..871
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            872..970
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            971..1069
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            1070..1147
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            1148..1252
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            1253..1384
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            1385..1570
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            1571..1723
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            1724..1837
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            1838..1964
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
     exon            1965..4638
                     /gene="Ankrd6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgctgtcgtg cctttgtgct ggctgtccct tgtcccacag aggctagcga ggtcggtaag
       61 agtcctccat tgtgaaactc cattgtggtc tgaggctgga ctgaaggttc tgccagcccg
      121 cgtggccaga gctgcgtctt gggagtgctc tttcctggat gtggacagag ggactcttga
      181 cagggtttga agtggaaatg agaactacta gggcctgaag atggagtagt aacaaaggca
      241 tcccccatga ttctcagcac ccttccctgt ggactccagc cccagccaga ggctgcatgt
      301 ggagctgaag aaactgacca gctgctttcc tgagagcccc tttctctcct aattcatgag
      361 ccagcaggat gcggtcgccg cgctttcaga acgcctgctc atagctgcgt acaaaggcca
      421 aacagagaat gtggttcagc tcatcaacaa gggtgccaag gtagcggtta ccaagcatgg
      481 ccggaccccc ttgcacctcg ctgccaataa gggtcatctt tctgtggtgc agattttgct
      541 gaaggctggc tgtgacctcg atgtacaaga tgatggggac cagacagcct tgcaccgggc
      601 cactgtggtg ggcaacactg agatcctcac agcgcttatc cgggagggat gtgccctgga
      661 cagacaggac aaggatggga atacggccct gcatgaagcc gcctggcatg gattcagcca
      721 gtcagccaag ctgctcgtta aagccggagc caacgtgctt gccagaaaca aggcagggaa
      781 cacggctctg cacctggcct gccagaatag tcactcccag agcacacgcg tcctcctgct
      841 gggcggctcc cgggctgacc tcaaaaataa tgcaggggac acctgcttgc acgtggctgc
      901 gcgctataac cacttgtccg ttgttagact cctcctcagt gctttctgct ctgttcatga
      961 aaagaaccag gctggagaca cggccctcca tgtggccgct gccctaaatc acaagaaggt
     1021 agttaaaatc ctgctggaag ccggtgctga cacgaccctt gtgaacaatg cagggcagac
     1081 cccactggag accgcccgct accacgacaa tcccgaagtt gctctgctcc tcaccaaggc
     1141 tccccagatc ttgcgcttca gtcgtgggcg aagcctgagg aaaaggaggg agaggctcaa
     1201 ggaagagagg agggctcagt ctgtgcccag agatgaggtg gcccagagca agggaagcgt
     1261 ctcagcagga gacaccccca gcagtgaaca agctgtaccc gaaaaggaag aagctaggag
     1321 agattgccca ccagcttccc aggagccaag aaaggatgaa aggaggagaa agtcaaggcc
     1381 agaggtgtca gcactatctg accccacccc agcagcagac caacaacctg gacaccaaaa
     1441 gaacctacat ggtcatcacc accaaaaaaa gaagagcaga catcgatgct ggtccccacc
     1501 accgccccac gggttcaggg cgtaccagct ctacacgctg taccgtggcg aggacgggaa
     1561 agtgatgcag gcaccaatca aaggttgtcg ctgtgagcct ctgatcaaca agctggagaa
     1621 ccagctggag gcggctgtgg aggagttaag agctgagctg ggaacagtgc aggacaaagt
     1681 gaacacaaag ctgggccaca tggagagcaa gagccagcac caaatgtgcg ttttggacaa
     1741 actgatggtg gagcggctgt cagctgagag aacggaatgt ctgaatcgcc tgcagcagca
     1801 tgcagctgct gagaagcagg agggagagaa acgtcagatg tcattggtgg atgaactgaa
     1861 atcctggtgt atgttgaaga tccagaatct ggagttgaga ctttcgggag agtctcggac
     1921 ctttagagct aaatccacac catctccctc cgactcctct ccagctgtag accaaccagt
     1981 ggtagctgca gggccgggag cagcttccga cagctcctct caggttgtga ggcccaagga
     2041 caaggcactc aatgccactg ctgtccccag acaccagcag gagctgcttc cctctgattg
     2101 cacaggctcc gggttaagga aggtcaaggc cccggctgct tccagactgg gtgatcagca
     2161 gactgggtcc tgtgtcaacc gaggcactca aaccaagaag tctgcgagag gtgggcagac
     2221 caagcatcga ggccaacaac cgacagccag cagccccagt gggcagcagc catccgcggc
     2281 aagcagtgac gcccgagatg cctcgcaagc cctggagcta acccagtatt tttttgaggc
     2341 tgtttctgct cagatggaaa agtggtacga acggaaaatt gaagaagcac gaagccaggc
     2401 cagtcagaaa gctcagcaag atgaggccac actgaaggag cacatcagga gtctagaaga
     2461 ggaggttgcc aagctgcgca caaagatgca caagtaaaac cagattctga agtggaccca
     2521 gcagggtttc cagcttgata acagcaaagt aactgtgtcc ccggagttgg ttgtcatgca
     2581 caaggtggat ttgcctttaa tagagtcact aattggttgt ggacacatac ttcgtgctct
     2641 gaagttacaa ggccttcact ggttaaaatg aatcctggga agatgtctat aaacagcaag
     2701 acaccaagaa gaggaggtgt gacccacgtc tgtgattcat gaagtgtgtc agaagcaaag
     2761 cagagaactc tgggaaccca gtagccattc acgtccatgc caacacacct gctgtgccta
     2821 gacggtcctt ctagcagagc tgggactcag atgcgggaag ccctctttct cccatgtaac
     2881 tcaagatgct catcttttaa aggggtgaaa ccctttcagg ttgtgaggat atacactgta
     2941 atgacctcag tgtccagtgt gtcttcaagt aagtttaagg atcatataaa ggagtagcaa
     3001 ttgctgactg tcaagtgaga agggtttaaa ccattggtca gttactgtga ttttggccaa
     3061 ataactgagc agattaatgg aaaaatattc accaaacaac tccagccagt taccttagat
     3121 tacctttcta gagtcaagac gtttgttcca tgttttgtaa agaaatcagg aaatatcacg
     3181 aaagtttaat tttgaattga cttctcactg aagaacatca agccgtcaaa aggcgttgcc
     3241 tgtttactga gtaagatgta ccagactgag gtggtgactc tatcttggtt gggaccttgg
     3301 atttgcctaa tcctttggta catggaacac ggattatgtc tgtctccaca tatgcataga
     3361 aacgtatgtt tctctaagcc taaggaccta ataactacta tccatgaatt gtaactaaaa
     3421 tgctgttcat tgagccaaag agaagtgatc tttgcggaat agtatgcatt tatgccttgg
     3481 tcaagccaag ttcttccttt tgcttatagt gacaatccac ggatagacat tcgtataaac
     3541 acgacagggc agatattggg tatgcatcat ccagtgagcc caattatttc ctgggaccga
     3601 cctatcctca gcctcttggg aggtacagcc cttccccatt ctccttcacc ggagtcctgt
     3661 cctcagctca cttgcacctg agccctgcta tgacactacc cacaacaaaa tgtcactcac
     3721 tcctgtagga tcactcctta ttcatacagc aaattattgg gaactgccta atactaagta
     3781 agagatgaaa ccccgagttc agcatgagtt attttcacta ttagaatact cattacctca
     3841 agaaaccctt gacaagaagg gcagaaatca actgtaactg aacatcaagt ctagaccaca
     3901 gaatatctta gtggcagtgc tttgatgata tcctcctacc tatgagaagc aggcagctta
     3961 tcactgtgaa tggatgtttt tgtcaagtca ttaagcataa agaccaggct attgtctaag
     4021 gccagtcagc cccttaccca cagggttgac ttctgaggaa gtggtggttg gcttgttttt
     4081 ggaaggctta ccgtgtactc tagactggct ttggtctcat gaccttcctg tcgcagccac
     4141 ctgagttggg actaaaggag tgagccccat ggccaatcat gttttgtttg taacaccagt
     4201 gttaggtttg tggcaattgg tcctcagcat tgtacagcac tgaggatcag ctgtgtcttt
     4261 cccctcgtgc tgtgtgcaaa aaacaaatat cccagctgta cttttacaga taactgctca
     4321 taccatacac tctcacaata ggtcatgttt caaaccgagg cctaaaaagt gtcaacagcc
     4381 gtgaagaaac atgttataaa acagtagtgt tgcatatcaa tgtccttttt aaaaaacagg
     4441 taattgttag cacatccctt agagtgcata ctgagcatct gtgctggggt gaaagtgtta
     4501 gtctagcatc acttttgatg tggagtccaa aatacaggtt tttcatgttt agatttgtgt
     4561 gtgcaaggca tgctgtctaa tttttttagt caccttgaac ttgtgtctcc tataagcatt
     4621 aaacgtttga gttctgtc
//
