LOCUS       NM_001025285            1904 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus ankyrin repeat domain 54 (Ankrd54), mRNA.
ACCESSION   NM_001025285
VERSION     NM_001025285.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Samuels,A.L., Klinken,S.P. and Ingley,E.
  TITLE     Liar, a novel Lyn-binding nuclear/cytoplasmic shuttling protein
            that influences erythropoietin-induced differentiation
  JOURNAL   Blood 113 (16), 3845-3856 (2009)
   PUBMED   19064729
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Mar 19, 2021 this sequence version replaced NM_001025285.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC093616.1, SRR26360186.2415952.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMN12840107 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-386               JAXUCZ010000007.1  112507743-112508128 c
            387-434             JAXUCZ010000007.1  112505946-112505993 c
            435-533             JAXUCZ010000007.1  112502405-112502503 c
            534-605             JAXUCZ010000007.1  112500280-112500351 c
            606-653             JAXUCZ010000007.1  112499771-112499818 c
            654-778             JAXUCZ010000007.1  112499566-112499690 c
            779-886             JAXUCZ010000007.1  112498628-112498735 c
            887-1904            JAXUCZ010000007.1  112497197-112498214 c
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..1904
                     /gene="Ankrd54"
                     /gene_synonym="RGD1309552"
                     /note="ankyrin repeat domain 54"
                     /db_xref="GeneID:362957"
                     /db_xref="RGD:1309552"
     exon            1..386
                     /gene="Ankrd54"
                     /gene_synonym="RGD1309552"
                     /inference="alignment:Splign:2.1.0"
     CDS             62..961
                     /gene="Ankrd54"
                     /gene_synonym="RGD1309552"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 54"
                     /protein_id="NP_001020456.1"
                     /db_xref="GeneID:362957"
                     /db_xref="RGD:1309552"
                     /translation="MAATGGGAEDESRSGRSSSEGECAVAPEPLAEAGGLFSFADLGA
                     ALGSGAGLPGRAVGRAQSPLRYLQVLWQQDVEPRDELRCKIPAGRLRRAARPHRRLGP
                     TGKEVHALKRLRDSANANDIETVQQLLEDGADPCAADDKGRTALHFASCNGNDQIVQL
                     LLDHGADPNQQDGLGNTPLHLAACTNHVPVITTLLRGGARVDALDRAGRTPLHLAKSK
                     LNILQEGHSQCLEAVRLEVKQIIHMLREYLERLGRHEQRERLDDLCTRLQMTSTKEQV
                     DEVTDLLASFTSLSLQMQSMEKR"
     exon            387..434
                     /gene="Ankrd54"
                     /gene_synonym="RGD1309552"
                     /inference="alignment:Splign:2.1.0"
     exon            435..533
                     /gene="Ankrd54"
                     /gene_synonym="RGD1309552"
                     /inference="alignment:Splign:2.1.0"
     exon            534..605
                     /gene="Ankrd54"
                     /gene_synonym="RGD1309552"
                     /inference="alignment:Splign:2.1.0"
     exon            606..653
                     /gene="Ankrd54"
                     /gene_synonym="RGD1309552"
                     /inference="alignment:Splign:2.1.0"
     exon            654..778
                     /gene="Ankrd54"
                     /gene_synonym="RGD1309552"
                     /inference="alignment:Splign:2.1.0"
     exon            779..886
                     /gene="Ankrd54"
                     /gene_synonym="RGD1309552"
                     /inference="alignment:Splign:2.1.0"
     exon            887..1904
                     /gene="Ankrd54"
                     /gene_synonym="RGD1309552"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgggtccgtt ggtcggttcg gaacgaggct ggcgctgcca gacccgcgcc tagccgttgc
       61 catggcagcc accggcgggg gcgcggagga cgagtcgcga tccggccgct cgagctccga
      121 gggcgagtgc gcggtggcgc cggagcctct ggcggaagcc ggaggcctgt tctcctttgc
      181 ggacctcggc gctgcactgg gcagcggcgc aggcctcccg ggtcgggcgg tgggcagggc
      241 ccagtccccg ctgcgctacc tccaagtcct gtggcagcag gacgtcgagc ctcgcgacga
      301 actgcgttgc aagattcccg ccgggcggct gaggcgtgca gccaggcccc accgacggct
      361 cgggcccacc ggcaaagagg tgcacgctct gaagaggctg agggactcag ctaatgccaa
      421 tgacatagaa acagtgcagc agcttctgga agatggtgcg gatccctgcg cagctgatga
      481 caaaggccga acagccctcc attttgcttc ctgcaatggc aatgaccaga ttgtgcagct
      541 tctcctggac catggggccg accccaacca acaggatggt ctgggcaaca ccccattgca
      601 cctggcggcc tgcaccaacc atgttcctgt catcaccaca ctgcttcgag gaggggcccg
      661 tgtagatgcc ctagacagag ctggccgcac gcccctacac ctggccaagt cgaaactgaa
      721 catcctgcag gagggtcatt ctcagtgcct ggaagccgtc cgcctagagg tgaagcagat
      781 catccacatg ctacgggagt acctggagcg cttggggcga catgaacagc gtgaacggct
      841 agatgacctc tgtacccgcc tccagatgac aagtaccaaa gaacaggtgg atgaagtgac
      901 ggacctcttg gccagcttca cctccctcag tctgcagatg cagagtatgg agaagaggta
      961 gcaaggaagg ctgcttcttg ctttaccgcc gcactcctgc cctctgcaca tgctacaggg
     1021 aaagcccaag ggatctggag ttccactttg cccttgccct gagatgctga ggacagaact
     1081 gacaatgtgc aacatctccc tgggtcagga ccacagcccc tgctcctgct gcataatacc
     1141 agctctgtag ccacactcca ggcccacacg tgctgtccta gcagacacca ctcctcctgt
     1201 ggcctccctg tccctcagcc cacctcagag ccctctctct tcccagccgt ggatttccat
     1261 tacctccacc tggctttggg taggccgctc tgaggccacc agggctgctc tgttctctaa
     1321 gctcgccctg ctccttacac cagcacttca gtttagccct gctcctgact ttcaaggaaa
     1381 cactgcactg tggggtgtct ctgagcagaa gagggacatt gctcaagctt aggccttcat
     1441 aagattagga aggacccttt ttagcccaaa gaaagatctg taacaccttc tctcccagtc
     1501 actggaacac tacacatggg agtccatttc acagcctact tatcagtggt tgatagtggg
     1561 tcatgggccc aggtccttat cccaggatcc tctaggcctt gggtgttttg ataagaggct
     1621 atacagatat ataactagag gtctttagtg gggagaagat tctggatcac ctaggtggac
     1681 tggatatcac cccaggtagc cctggggagg aggccggagg tgacctatgc catgtggacg
     1741 tgagtcatgg aggaagaagc caggagctgg ctaaggacag ccagtgggtc cctcggagcc
     1801 tccagcaggg actggctctg ctgacaactg caccagacag agctcagctg gacatgtttt
     1861 tgtttctggc ctccagaatt gtgaaaagaa gtctgttggt tgaa
//
