LOCUS       XM_056985480            1617 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin repeat domain 53 (Ankrd53),
            mRNA.
ACCESSION   XM_056985480
VERSION     XM_056985480.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_056985480.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1617
                     /gene="Ankrd53"
                     /note="ankyrin repeat domain 53; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins, and 81% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:500230"
                     /db_xref="RGD:1561200"
     CDS             1..1557
                     /gene="Ankrd53"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 53"
                     /protein_id="XP_056841460.1"
                     /db_xref="GeneID:500230"
                     /db_xref="RGD:1561200"
                     /translation="MKTMTQEVLAGAADGRGSAPKAGTGAGRVRRHLRRRSNAATPPR
                     SRTTPRRTGALDSRGQQGRKEQSRLSAQGSTLQAEHNSKVPSSDPESSQISTSESWNQ
                     KVIATYSEFFAASVGNVDWLRFCVNPERKEVVVDDKGFTAIHFAAQKCQLSCLKVLIE
                     EYKYPVDLPTNKGQTPLHLVIHKNNRSDIIPCVDYLLKKGAAINSQTCNGSTPLHLAS
                     ISGILGCIKLLVQNGANVHAQDAIGFKPIDYCRLWNHRTCARFLKDAMWKHDKKVFAR
                     EMERLKTLKKKLTIMEYRYLTEFQKEQQIMREDLFRKWLQSKVLARTLGSAVSKQNAS
                     VQPWSLASKTLEHQIIKSFQYPSIEAQLKSLPSPMVPPKPVYKQSKISRPKIWNCSAN
                     PSRPRITDIGHPQGIRLGVHPEPYKEHDFCRFLEMTRNKLGGACLRTVDCQLVKPVPQ
                     LPFEVMIRVLYPGTRPYRMKVPQGFYARDILKVPQKRHLGDTCTNTVAMSLRDTFDEP
                     FLASLEACQT"
ORIGIN      
        1 atgaagacta tgacacagga agtcctggct ggggccgcgg atggcagagg ctctgccccg
       61 aaggcgggga cgggggcggg tcgagtgcga cgccacttga ggcgtcggtc taatgccgct
      121 acacccccca ggagccgcac cactccccgc agaactgggg ccttggattc cagagggcaa
      181 caggggagaa aagagcagtc ccgcctctct gcacagggaa gcacactgca ggcagaacac
      241 aactcgaagg ttcctagcag cgaccccgaa tcctcgcaga tcagtacctc cgaatcgtgg
      301 aaccaaaaag tgatcgcgac ctactccgag tttttcgctg cctcggtggg caatgtggat
      361 tggcttcggt tctgtgtgaa tccggaacgc aaggaggtcg tagtcgacga caaggggttc
      421 acagccatcc acttcgcagc ccagaaatgc cagctttcct gtcttaaggt cttgatagag
      481 gagtacaaat atcctgtgga cctgcccacc aataaaggcc agacgcccct gcacctagtc
      541 atccataaaa acaacaggtc ggacattatc ccctgcgttg actacctgct caagaaaggg
      601 gcagccatca actcgcagac atgtaacggc tccacacccc tgcacctggc ttctatcagt
      661 ggcattctgg gatgtattaa gctgctggtg cagaatggag ccaatgtgca cgcccaagat
      721 gccataggct tcaagcccat cgactactgc agactgtgga accaccgtac ctgtgcccgg
      781 ttcttgaagg atgccatgtg gaaacatgat aagaaggtct ttgcccgaga gatggagaga
      841 ctgaagactt tgaagaagaa gctgaccatt atggagtatc gctacctgac tgagtttcaa
      901 aaagaacagc aaattatgag agaggatctt ttcagaaagt ggctccaaag caaggtgctg
      961 gcccggaccc tgggctctgc tgtctccaag caaaatgcta gtgtccaacc ttggtcattg
     1021 gcctccaaga ctttagaaca ccagattatt aaaagcttcc agtatccatc tatagaagct
     1081 cagctgaaaa gcttgccctc acccatggtg ccacccaagc ccgtctacaa gcagagcaaa
     1141 atcagtcggc ccaagatatg gaattgtagt gctaaccctt ccaggccccg gatcacagat
     1201 attggccacc cacagggtat acgcctgggt gtgcacccag aaccctataa ggagcatgac
     1261 ttctgcagat tcctggagat gactcgaaat aaacttgggg gtgcatgcct gcgcacagtg
     1321 gactgtcaat tggtgaaacc tgtaccccag ctgccttttg aggtgatgat ccgggtgctg
     1381 tacccaggga ctcgacccta caggatgaaa gtgccccagg gcttctatgc acgtgacata
     1441 ctcaaagtgc cccagaaacg gcacttggga gatacttgta ccaatacagt ggccatgagc
     1501 ctacgtgaca catttgatga acccttccta gcttccctgg aagcttgtca gacttgagag
     1561 gcctcaccct ccaagcaagt tctcacataa agttgttctg gaagctgtgg taaagga
//
