LOCUS       NM_001191875            3387 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ankyrin repeat domain 52 (Ankrd52), mRNA.
ACCESSION   NM_001191875 XM_343139
VERSION     NM_001191875.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Jul 17, 2010 this sequence version replaced XM_343139.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.25384.1,
                                           SRR26643297.24060.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-88                JAXUCZ010000007.1  1391372-1391459
            89-172              JAXUCZ010000007.1  1391779-1391862
            173-251             JAXUCZ010000007.1  1392300-1392378
            252-322             JAXUCZ010000007.1  1392565-1392635
            323-523             JAXUCZ010000007.1  1393547-1393747
            524-611             JAXUCZ010000007.1  1394536-1394623
            612-754             JAXUCZ010000007.1  1394891-1395033
            755-967             JAXUCZ010000007.1  1395318-1395530
            968-1046            JAXUCZ010000007.1  1395915-1395993
            1047-1161           JAXUCZ010000007.1  1396232-1396346
            1162-1244           JAXUCZ010000007.1  1396645-1396727
            1245-1362           JAXUCZ010000007.1  1396803-1396920
            1363-1431           JAXUCZ010000007.1  1397056-1397124
            1432-1572           JAXUCZ010000007.1  1397268-1397408
            1573-1653           JAXUCZ010000007.1  1397487-1397567
            1654-1765           JAXUCZ010000007.1  1400075-1400186
            1766-1837           JAXUCZ010000007.1  1400379-1400450
            1838-2039           JAXUCZ010000007.1  1400876-1401077
            2040-2127           JAXUCZ010000007.1  1401424-1401511
            2128-2245           JAXUCZ010000007.1  1401633-1401750
            2246-2465           JAXUCZ010000007.1  1402764-1402983
            2466-2553           JAXUCZ010000007.1  1403112-1403199
            2554-2637           JAXUCZ010000007.1  1403302-1403385
            2638-2783           JAXUCZ010000007.1  1403465-1403610
            2784-2866           JAXUCZ010000007.1  1403703-1403785
            2867-2949           JAXUCZ010000007.1  1403992-1404074
            2950-3041           JAXUCZ010000007.1  1404255-1404346
            3042-3387           JAXUCZ010000007.1  1404678-1405023
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..3387
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /note="ankyrin repeat domain 52"
                     /db_xref="GeneID:362811"
                     /db_xref="RGD:1307124"
     exon            1..88
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     CDS             62..3292
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 6
                     regulatory ankyrin repeat subunit C"
                     /protein_id="NP_001178804.1"
                     /db_xref="GeneID:362811"
                     /db_xref="RGD:1307124"
                     /translation="MGILSITDQPPLVQAIFSRDVEEVRSLLSQKENINVLDQERRTP
                     LHAAAYVGDVPILQLLLMSGANVNAKDTLWLTPLHRAAASRNEKVLGLLLAHSADVNA
                     RDKLWQTPLHVAAANRATKCAEALAPLLSSLNVADRSGRSALHHAVHSGHLETVNLLL
                     NKGASLNVCDKKERQPLHWAAFLGHLEVLKLLVARGADLSCKDRKGYGLLHTAAASGQ
                     IEVVKYLLRMGAEIDEPNAFGNTALHIACYLGQDAVAIELVNAGANVNQPNDKGFTPL
                     HVAAVSTNGALCLELLVNNGADVNYQSKEGKSPLHMAAIHGRFTRSQILIQNGSEIDC
                     ADKFGNTPLHVAARYGHELLISTLMTNGADTARRGIHDMFPLHLAVLFGFSDCCRKLL
                     SSGQLYSIVSSLSNEHVLSAGFDINTPDSLGRTCLHAAASGGNVECLNLLLSSGADLR
                     RRDKFGRTPLHYAAANGSYQCAVTLVTAGAGVNEADCKGCSPLHYAAASDTYRRAEPH
                     TASSHDAEEDELLKESRRKEAFFCLEFLLDNGADPSLRDRQGYTAVHYAAAYGNRQNL
                     ELLLEMSFNCLEDVESTVPVSPLHLAAYNGHCEALKTLAETLVNLDVRDHKGRTALFL
                     ATERGSTECVEVLTAHGASALIKERKRKWTPLHAAAASGHTDSLHLLIDSGERADITD
                     VMDAYGQTPLMLAIMNGHVDCVHLLLEKGSTADAADLRGRTALHRGAVTGCEDCLAAL
                     LDHDAFVLCRDFKGRTPIHLASACGHTAVLRTLLQAALSTDPLDAGVDYSGYSPMHWA
                     SYTGHEDCLELLLEHSPFSYLEGNPFTPLHCAVINNQDSTTEMLLGALGAKVVNSRDA
                     KGRTPLHAAAFADNVSGLRMLLQHQAEVNATDHTGRTALMTAAENGQTAAVEFLLYRG
                     KADLTVLDENKNTALHLACSKGHEKCALMILAETQDLGLINATNSALQMPLHIAARNG
                     LASVVQALLSRGATVLAVDEEGHTPALACAPNKDVADCLALILSTMKPFPPKDAVSPF
                     SFSLLKNCGIAAAKTVGGCGALPHGASCPYSQERHGAIGLDGCYSE"
     exon            89..172
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            173..251
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            252..322
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            323..523
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            524..611
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            612..754
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            755..967
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            968..1046
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            1047..1161
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            1162..1244
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            1245..1362
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            1363..1431
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            1432..1572
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            1573..1653
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            1654..1765
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            1766..1837
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            1838..2039
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            2040..2127
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            2128..2245
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            2246..2465
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            2466..2553
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            2554..2637
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            2638..2783
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            2784..2866
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            2867..2949
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            2950..3041
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
     exon            3042..3387
                     /gene="Ankrd52"
                     /gene_synonym="RGD1307124"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctgccgctg ccgccgccgc cgccgccgcg agctcgatgc ggacggagcc tgggccgggc
       61 catggggatc ctcagcatca cggaccagcc gcccctggtc caggccatct ttagccgaga
      121 tgtggaggaa gtgcgttccc tcctctcgca gaaggagaac atcaatgtac tggaccaaga
      181 gaggcgaacc ccattgcatg ctgctgccta cgtaggcgat gtccccatcc tccagttgct
      241 actgatgtca ggtgctaatg tcaacgctaa ggacacactg tggctgaccc ctcttcatcg
      301 tgccgctgcc tcccgaaacg agaaggtgct ggggctgctg ctggcacact ccgcggatgt
      361 gaatgcccgg gacaagctgt ggcagacacc actgcatgtg gctgctgcca accgggccac
      421 caagtgtgcc gaggctctgg cacctctgtt gagcagcctc aatgtggctg acaggagcgg
      481 ccgtagcgct ctgcaccacg cagtacacag tgggcatctt gagaccgtga acctgctcct
      541 caataaggga gccagcctga atgtctgcga taaaaaggag cggcaaccac tgcactgggc
      601 tgcttttcta gggcatttag aggtcctgaa actgctggta gcacgtggag cagacctcag
      661 ctgtaaagat cggaagggct acgggctgct ccacacagct gcagccagcg gccagatcga
      721 agtggtgaag tacttgcttc ggatgggggc tgagattgat gagcccaacg ctttcggaaa
      781 cacagctttg cacatcgctt gctacctggg ccaagatgct gtggctatcg aactagtgaa
      841 tgcaggagcc aatgtcaacc agccaaatga caagggtttc acaccactgc acgtggcagc
      901 tgtctcgacc aatggcgcac tctgtttgga gctgttagtc aataatgggg ctgacgtcaa
      961 ctaccagagt aaagaaggga aaagtcccct gcacatggct gccatccatg ggcggttcac
     1021 gcgttcccag atcctcatcc agaatggtag cgagattgat tgtgctgaca aattcgggaa
     1081 cacgccccta catgtggctg ctcgatacgg acacgagctt ctcatcagca ctctcatgac
     1141 caatggcgca gatactgccc ggcgcggtat ccacgacatg ttccccctgc acttagccgt
     1201 tctctttgga ttctctgact gttgccggaa gcttctttcc tcaggtcagc tgtacagcat
     1261 cgtgtcttca ctcagtaatg agcatgtgct ttctgctggg tttgacatca acacacctga
     1321 cagccttggc cgcacctgtc ttcatgctgc tgcttctgga gggaatgttg agtgtcttaa
     1381 tttgctgctg agcagtggag ctgacctgag gaggagagac aaatttggaa ggaccccact
     1441 gcactatgca gctgccaatg gcagctacca gtgtgcggtg acactggtga cagccggggc
     1501 aggcgtcaat gaagccgact gtaagggctg ctctccccta cactatgctg ctgcctctga
     1561 cacctaccgg agagcggaac cccacactgc ttccagccat gatgcagaag aggatgagct
     1621 actgaaggaa tcccgtagga aggaggcctt cttctgtctg gagttcttat tggataatgg
     1681 tgcagacccc tccctgcggg acaggcaggg ctacacagct gtgcactatg cagccgccta
     1741 cggcaacaga cagaacctcg aactgctctt agaaatgtcc tttaactgcc tggaggatgt
     1801 ggagagtaca gttcccgtca gccctttgca cttagctgcc tacaacggtc actgtgaagc
     1861 cctgaagaca ctggctgaaa cgctggtgaa cctggatgta agggaccaca agggccggac
     1921 tgcactcttc ctggccactg agcgaggctc cactgagtgt gtggaggtac tgacggccca
     1981 tggtgcctct gccctcatca aggagcgtaa acgcaagtgg acacccttac atgctgctgc
     2041 tgcctctggc cacaccgatt ccctgcactt gctgattgac agtggggagc gcgctgatat
     2101 cacagatgtc atggatgcct atggacaaac cccgctgatg ctggccatta tgaatggtca
     2161 tgtggactgt gtacatctgc tgctagagaa aggatccacg gctgatgctg ctgacctccg
     2221 gggccgcact gccctccacc gtggggcagt gactggctgt gaggactgcc tggctgcact
     2281 gctggatcac gatgcatttg tactgtgccg agactttaag ggccgcacac ccattcacct
     2341 ggcctcagcc tgcggccata ctgcagtgct gcggactctg ctgcaggctg ccctttccac
     2401 agaccccctg gatgccggtg tcgactacag cggatactcg cccatgcatt gggcctccta
     2461 cactggacat gaagattgtc tggagttgtt acttgaacac agcccgttct catacttgga
     2521 gggaaacccc ttcactcctt tgcactgtgc agtaattaat aaccaagaca gcaccacaga
     2581 gatgctgctg ggggctctgg gtgccaaggt tgtgaacagc cgggacgcca aaggacggac
     2641 cccccttcat gccgctgcct ttgcggacaa tgtctctgga ctccggatgc tgttgcagca
     2701 tcaagctgaa gtgaatgcca ctgaccacac tggccgcact gcgctcatga cggccgctga
     2761 gaacggacag actgctgctg tggaatttct gctgtaccga gggaaggcag acctgactgt
     2821 gctggatgag aacaagaaca ctgcccttca cttggcttgc agcaagggcc atgagaaatg
     2881 tgccctcatg atcctggcgg aaacccaaga ccttggcctt atcaatgcta ccaacagtgc
     2941 gctgcagatg ccgctccaca ttgctgcccg gaatggtctg gcttctgtgg tgcaggccct
     3001 gctgagtcgt ggggccacag tgctggctgt ggatgaagaa ggtcacactc cagcactggc
     3061 ctgcgctccc aacaaagatg tggcagactg cctggccttg atcctctcca ccatgaagcc
     3121 tttcccaccc aaggacgccg tcagtccttt cagcttcagc ctgctcaaga actgcggcat
     3181 cgcagccgcc aagacggtgg gtggctgtgg cgccctgcct cacggggcct cctgtcccta
     3241 cagccaggag cggcatggtg ccattgggtt agatggctgc tactcagagt agcccccttc
     3301 agtgtccctc tccctgccgg tggcttgata ccttattcta tttatttaga aaaaagtcta
     3361 aacatttagg gcactttaaa ggagaac
//
