LOCUS       NM_001013948            2396 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus ankyrin repeat domain 46 (Ankrd46), mRNA.
ACCESSION   NM_001013948 XM_216938
VERSION     NM_001013948.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001013948.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB095364.1, BC105616.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840110 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-73                JAXUCZ010000007.1  69553205-69553277   c
            74-184              JAXUCZ010000007.1  69552376-69552486   c
            185-517             JAXUCZ010000007.1  69540868-69541200   c
            518-676             JAXUCZ010000007.1  69539587-69539745   c
            677-2396            JAXUCZ010000007.1  69532308-69534027   c
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q22"
     gene            1..2396
                     /gene="Ankrd46"
                     /gene_synonym="ank-s; RGD1309382"
                     /note="ankyrin repeat domain 46"
                     /db_xref="GeneID:299982"
                     /db_xref="RGD:1309382"
     exon            1..73
                     /gene="Ankrd46"
                     /gene_synonym="ank-s; RGD1309382"
                     /inference="alignment:Splign:2.1.0"
     exon            74..184
                     /gene="Ankrd46"
                     /gene_synonym="ank-s; RGD1309382"
                     /inference="alignment:Splign:2.1.0"
     exon            185..517
                     /gene="Ankrd46"
                     /gene_synonym="ank-s; RGD1309382"
                     /inference="alignment:Splign:2.1.0"
     CDS             207..893
                     /gene="Ankrd46"
                     /gene_synonym="ank-s; RGD1309382"
                     /note="ankyrin repeat small protein"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 46"
                     /protein_id="NP_001013970.1"
                     /db_xref="GeneID:299982"
                     /db_xref="RGD:1309382"
                     /translation="MSYVFVNDSSQTNVPLLQACIDGDFTYSKRLLESGFDPNIRDSR
                     GRTGLHLAAARGNVDICQLLHKFGADPLATDYQGNTALHLCGHVDTIQFLVSNGLKID
                     ICNHQGATPLVLAKRRGVNKDVIRLLESLEEQEVKGFNRGTHSKLETMQTAESESAME
                     SHSLLNPNLQQGEGVLSSFRTTWQEFVEDLGFWRVLLLILVIALLSLGIAYYVSGVLP
                     FVDNQPGLVH"
     exon            518..676
                     /gene="Ankrd46"
                     /gene_synonym="ank-s; RGD1309382"
                     /inference="alignment:Splign:2.1.0"
     exon            677..2396
                     /gene="Ankrd46"
                     /gene_synonym="ank-s; RGD1309382"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtggccgcc agcgccccgc cctcagtcac tggagaggag gagctgctgc cttcattgct
       61 ccttcaggat cagataaact gaggcacaga gtctaaatta acctgtccaa ggccagacag
      121 ttggcagagt aagtggaatc agagacacac aagacttcac gccagcaccc tttaccttcc
      181 aaaggggtgt ccgtccacca cagaccatgt cctacgtttt tgtgaatgac tcttcacaga
      241 ctaatgtgcc cttgcttcaa gcttgcatcg atggggactt cacctattct aagaggcttc
      301 tggaaagtgg ctttgaccca aatatccgag acagcagagg cagaacaggc ctgcacctcg
      361 ccgcagcccg agggaacgtg gacatctgcc agctgctaca taagtttggt gctgatccac
      421 tggccacgga ttatcagggg aacacagccc tccacctgtg tggccatgtg gacaccatcc
      481 agttcttagt ttccaacggg ctcaaaattg atatttgcaa tcatcaaggt gctacccctt
      541 tagttctggc aaagcgccgg ggtgtgaata aagatgtcat ccgactgctg gagtctttgg
      601 aagaacagga agtaaaagga tttaacagag gcacacactc gaaattggag accatgcaga
      661 cggcggagag cgaaagtgcc atggaaagcc attcactgct caaccccaat ctccagcaag
      721 gcgaaggagt cctgtccagc ttccggacta cgtggcagga atttgtggag gacctgggtt
      781 tctggagggt cttgctcttg atcttggtca ttgctttgct ttctctgggc attgcctact
      841 acgtgagtgg ggtgctgccc tttgtggata accagcctgg gctggtgcac tgagggctct
      901 cggacgtaag gcaaggggca gctggtgtgg cttttcagtt cttagaccat ttgttagcac
      961 aaggcagtga ggcctgtccg tgtttaggac ttttatttac tgtgacgctt acagaagaat
     1021 gatgtcccct ctgaacttca ccctgtagtt ggctatactg cgtcctgatg ccaccctctg
     1081 acgcagccgg gtccaaggaa gaattctcca ggcttgtgtg acccaagtgt ggtggacact
     1141 gaaggtagag gcttgggagg cctcagagcg gggcctgacc ttgatggagg agcagtggcc
     1201 atctaggatt ccattcgcta gtggctttgt ttttttgttg tttttttttt ttttaattta
     1261 ctttcctggc aagaggaggg agagaaaact ttcaacttaa attttaattt cttttacaat
     1321 ctgtatgaca aattagaact gttagaaact ttgactttaa aagttcaggt tactcagaca
     1381 gtagacaggt ttaggaagtt ttttcgttag catggattga cttgatcaat gtttagcgcc
     1441 atggagcgat tttgattcat tctaaactga ttgcagtgtc tgagaatcaa ctctttgagg
     1501 agttcagctc actcttcagt ccctcccatt gttacttttg agatgtccca ttcagaaaaa
     1561 caccaggaaa ccctttgtag tgaatagttg ttagagaaag agtgctctcc ttcattatca
     1621 ccaaactcgg gagtgccgac aagccagctg tgtcatgggc acaccacagt taaccctggg
     1681 tctgaacccg tctaagtcag caggagccca gccgttgggg tagggggtgt atttctgagt
     1741 aaagagccct gaacagtacc gtgctgctgc tacggtgtct tcccgtgtcc aggtgcatta
     1801 tatgaataga acgcagcttc cctgcagtgt ctgaaagccc tctttggtcc tgtggtatag
     1861 aaatcacgta atttttgttt gtgtttgttt ttatattaca gagcatggag gcttaataat
     1921 tgagtaaaat ctgaaacttg cagtgaagag ctaacagttc tcttttctat agcaaaggta
     1981 cccctagctg actgtccttc tacaagcctc tcgctcactg acattttctc ctctgcttcc
     2041 agatacccag tactgacact cttttctttc atgcggcttt accctgtctg aaggaactgt
     2101 ttacagctcc ttactggctg cttcagaatc cgcctgcagt gtcttgcttt taactaatca
     2161 tgtttggtga atgcaagggg gaaacagtct tttgcttttg cacggagaac actagaattc
     2221 aagttcaaag tgtgttcaga atgagtgctg tggaattcgc ttcccctctg taaatcagac
     2281 tgtgtgatgt aatactctgc ctctaagatc cttgcttcct gcccagccct ggtttctgtg
     2341 catcatgtgc tcaacattgt tcatttaact gcttccaata aatgcattta taaatc
//
