LOCUS       NM_001191807            6093 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus ankyrin repeat domain 44 (Ankrd44), mRNA.
ACCESSION   NM_001191807 XM_237153
VERSION     NM_001191807.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6093)
  AUTHORS   Bonaldo MF, Lennon G and Soares MB.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000214.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001191807.5.
            
            On Feb 10, 2021 this sequence version replaced NM_001191807.3.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-209               JACYVU010000214.1  12422191-12422399   c
            210-293             JACYVU010000214.1  12311250-12311333   c
            294-372             JACYVU010000214.1  12276108-12276186   c
            373-443             JACYVU010000214.1  12265944-12266014   c
            444-644             JACYVU010000214.1  12251335-12251535   c
            645-732             JACYVU010000214.1  12250911-12250998   c
            733-875             JACYVU010000214.1  12248196-12248338   c
            876-1088            JACYVU010000214.1  12246852-12247064   c
            1089-1167           JACYVU010000214.1  12234886-12234964   c
            1168-1282           JACYVU010000214.1  12224233-12224347   c
            1283-1365           JACYVU010000214.1  12216425-12216507   c
            1366-1429           JACYVU010000214.1  12215223-12215286   c
            1430-1498           JACYVU010000214.1  12213217-12213285   c
            1499-1639           JACYVU010000214.1  12210630-12210770   c
            1640-1720           JACYVU010000214.1  12207831-12207911   c
            1721-1832           JACYVU010000214.1  12204909-12205020   c
            1833-1904           JACYVU010000214.1  12155198-12155269   c
            1905-2106           JACYVU010000214.1  12147116-12147317   c
            2107-2194           JACYVU010000214.1  12143139-12143226   c
            2195-2312           JACYVU010000214.1  12142203-12142320   c
            2313-2529           JACYVU010000214.1  12140492-12140708   c
            2530-2617           JACYVU010000214.1  12135776-12135863   c
            2618-2701           JACYVU010000214.1  12134498-12134581   c
            2702-2847           JACYVU010000214.1  12132919-12133064   c
            2848-2930           JACYVU010000214.1  12132427-12132509   c
            2931-3013           JACYVU010000214.1  12129887-12129969   c
            3014-3105           JACYVU010000214.1  12127902-12127993   c
            3106-6093           JACYVU010000214.1  12121637-12124624   c
FEATURES             Location/Qualifiers
     source          1..6093
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q31"
     gene            1..6093
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /note="ankyrin repeat domain 44"
                     /db_xref="GeneID:301415"
                     /db_xref="RGD:1561893"
     exon            1..209
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     CDS             183..3164
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 6
                     regulatory ankyrin repeat subunit B"
                     /protein_id="NP_001178736.3"
                     /db_xref="GeneID:301415"
                     /db_xref="RGD:1561893"
                     /translation="MAVLKLCDQPPLVQAIFSGDPEEIRLLIHKTEDVNALDSEKRTP
                     LHVAAFLGDAEIIELLILSGARVNAKDNMWLTPLHRAVASRSEEAVQVLIKHSADVNA
                     RDKNWQSPVHVAAANKAVKCAEVIIPLLSSVNVSDRGGRTALHHAALNGHMEMVNLLL
                     AKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVTCKDKKGYTPLHAAASNGQ
                     INVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVNELIDYGANVNQPNNSGFTPL
                     HFAAASTHGALCLELLVNNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEIDC
                     VDKDGNTPLHVAARYGHELLINTLITSGADTAKCGIHSMFPLHLAALNAHSDCCRKLL
                     SSGFEIDTPDTFGRTCLHAAAAGGNVECIKLLQSSGADFHKKDKCGRTPLHYAAANCH
                     FHCIKALVTTGANINETDNWGRTALHYAAASDMDRNKMILGNAHDNSEELERAREVKG
                     KDAALCLEFLLQNDANPSIRDKEGYNSIHYAAAYGHRQCLELLLERTNTGFEESDGGA
                     LKSPLHLAAYNGHHQALEVLLQSLVDLDIRDEKGRTALYLAAFKGHTECVEALVNQGA
                     SIFVKDNVTKRTPLHASVINGHTLCLRLLLEIADNPEVVDVKDAKGQTPLMLAVAYGH
                     IDAVSLLLEKEANVDAVDTVGCTALHRGIMTGHEECVQMLLEQEASILCKDSRGRTPL
                     HYAAARGHATWLNELVQIALSEEDCCLKDNQGYTPLHWACYNGNENCIEVLLEQKCFR
                     KFIGNPFTPLHCAIINGHESCASLLLGAIDSSIVSCRDDKGRTTLHAAAFGDHAECLQ
                     LLLRHDAQVNAVDNSGKTALMMAAENGQAGAVDILVNSAQADLTVKDKDLNTPLHLAI
                     SKGHEKCALLILDKIQDESLINAKNSALQTPLHIAARNGLKVVVEELLAKGACVLAVD
                     ENASRSNGPRSPPGTAVRKEE"
     exon            210..293
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            294..372
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            373..443
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            444..644
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            645..732
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            733..875
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            876..1088
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            1089..1167
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            1168..1282
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            1283..1365
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            1366..1429
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            1430..1498
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            1499..1639
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            1640..1720
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            1721..1832
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            1833..1904
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            1905..2106
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            2107..2194
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            2195..2312
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            2313..2529
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            2530..2617
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            2618..2701
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            2702..2847
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            2848..2930
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            2931..3013
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            3014..3105
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
     exon            3106..6093
                     /gene="Ankrd44"
                     /gene_synonym="RGD1561893"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcccgcgagc cggggctggg ctctgggagg caggcggcag cggccgagcg gtggcagggc
       61 tgtcaccttc gcgagcccag ctcctggcgc ttccccgggc cgtcccttcc gtttctccgg
      121 gctcccggcg ttgacatcta cgaagcggag agctgtatgt gcgcgcgcgc gggaacggaa
      181 gaatggcagt gctcaaactc tgcgatcagc cacctctggt ccaggcaatc ttcagtggcg
      241 acccagagga gattcgcctg ctcatccata agactgaaga tgtgaacgca ctggattctg
      301 agaaacgaac cccgcttcat gtggctgcat tcctgggaga tgcagagatc atcgagctcc
      361 tgattttgtc aggagctcgc gtaaatgcca aggacaacat gtggctgacc ccactgcacc
      421 gggctgttgc ttccagaagt gaagaggcag tgcaagtatt gattaaacac tcggctgacg
      481 tcaatgcaag ggacaagaat tggcagagcc ccgtccatgt ggcagcagcc aataaggctg
      541 tcaagtgtgc agaagtgatc attccactcc tgagcagtgt caatgtctct gacagagggg
      601 gacgcacagc cttgcaccat gcggctctga acggacacat ggagatggtc aatttactct
      661 tggccaaagg ggcaaacatc aatgcatttg acaagaagga ccggcgtgct ctccactggg
      721 cagcatacat gggccacctg gatgttgtgg cactgctcat taaccatggc gcagaagtga
      781 cctgcaagga taagaagggc tataccccac tgcacgctgc agcctccaat gggcagatca
      841 atgttgtcaa acatctcctg aacctggggg tggagattga tgaaatcaat gtctatggaa
      901 acacagcact tcacattgcc tgctacaatg gccaggatgc tgtcgttaat gagctgatcg
      961 actacggcgc taacgtgaac cagcctaaca acagtggctt cacccctctg cactttgcag
     1021 cggcgtctac tcacggtgct ctgtgtctgg aactgttagt caacaatggg gccgatgtga
     1081 acattcagag taaggatggc aaaagtcctc tgcacatgac ggctgtccat gggcggttca
     1141 cacggtcaca aaccctcatt cagaatggag gtgaaatcga ctgtgtggat aaggatggca
     1201 acacacctct ccatgtggct gcaagatatg gtcacgagct cctgattaac accctaataa
     1261 ctagcggagc tgacacagcc aagtgtggaa tccatagcat gttccccctc catttagctg
     1321 ccctaaatgc tcactctgac tgctgcagga agttgttatc ctctggcttt gaaatagaca
     1381 ccccagatac gtttggaaga acgtgcctcc acgccgctgc tgcaggaggc aatgtagaat
     1441 gtataaagct cttgcagagc agcggagcgg attttcacaa aaaggacaaa tgtgggagga
     1501 cccctttgca ctatgcagct gcaaattgtc atttccactg tattaaagca ttagtgacca
     1561 ccggagccaa tatcaatgaa acagacaact ggggacggac agctttgcac tacgctgctg
     1621 catcagacat ggatagaaat aagatgatct taggcaacgc ccatgacaat tctgaagaac
     1681 ttgaaagggc cagggaagtg aaggggaagg acgccgcgct atgtctagag tttctgcttc
     1741 agaacgatgc aaacccatcc atccgggaca aggaaggcta caatagcatc cattatgctg
     1801 cggcctatgg ccacaggcag tgtctagaac tgcttttgga aagaaccaac actggttttg
     1861 aagaatcaga cggcggtgct ctcaagagtc cactccactt agcggcctac aatgggcacc
     1921 accaagcctt ggaggtcctt ctccagtccc tagtggacct ggacatcagg gatgagaaag
     1981 gccggacggc cctgtaccta gctgctttca agggacacac agaatgtgtg gaagcacttg
     2041 ttaaccaggg cgcatccatc ttcgtgaaag acaatgtcac caaaagaact ccacttcatg
     2101 cctcggttat taatggtcac acgctgtgtt tgaggctact acttgaaata gcggacaacc
     2161 cggaagtggt tgatgtgaag gatgccaagg gacaaacccc actgatgctt gcagtagcat
     2221 atggacacat tgatgccgtt tcgttgttac ttgaaaagga agcaaacgta gatgctgttg
     2281 acacagtggg ctgcacagct ttacatagag ggatcatgac aggacatgag gaatgtgtgc
     2341 aaatgctgct ggaacaagaa gcatccatcc tctgtaaaga ctccagaggg aggacacccc
     2401 tgcactatgc cgctgcccgg ggccacgcca cgtggctgaa tgagttggtc cagattgcgc
     2461 tttctgaaga ggactgttgc ctcaaagaca accagggata cacgccgctg cactgggcct
     2521 gttacaatgg taatgaaaat tgcatagagg tacttttgga gcaaaaatgt tttcgaaaat
     2581 ttattggtaa tcccttcact ccactgcact gtgcaataat aaacggtcat gagagctgtg
     2641 catcactgct cctgggggcc atagattcca gcattgtcag ctgtagggat gacaaaggca
     2701 ggacaaccct ccatgcggca gcctttgggg atcatgcaga atgcttgcag ctgcttctga
     2761 ggcatgacgc tcaagtgaat gccgtagata attcagggaa aacagcgctg atgatggccg
     2821 ctgagaacgg gcaggcaggc gctgtggata ttttggtgaa cagtgcccag gctgacctga
     2881 ctgtgaaaga taaggacctg aacacgccct tgcacctggc tatcagtaaa ggccatgaga
     2941 aatgtgcctt gttaatactt gacaagatac aagacgagag ccttatcaac gcgaaaaaca
     3001 gtgcattgca gacacccctc catattgctg cacgcaatgg cttgaaggtg gtagttgagg
     3061 agctgctggc taaaggagcc tgtgtacttg ccgtagatga aaatgcttct aggtcgaatg
     3121 gaccccgttc tccacctgga acagctgtac gaaaagaaga atgagacttt aagaattatg
     3181 cacatacaca tgcacacatg tgtgtatatt tatgtatgta cttcatcaac cagctatcca
     3241 tgaggaccaa aatgcttctg cttaaactgg gatgttctaa gtgttttttt ctttctacat
     3301 gcaagtgaga actgcagtaa cttttctatg gggttaaaat gtaatcgttt tacataccag
     3361 tctttattgt attttatatt tctaatgaca cagatttcta gttgatagct tgacatttgt
     3421 aaccgatgat gtgttgacca caggtttttg ttttcagact agagaatatg tctgtatact
     3481 ttgatgtaaa tgtgtttcta tttatttgaa atgaaagaaa tgccaagaaa tatccactgt
     3541 ttagatttgc cctcactctc tgtctctgtc tctctgtctc tgtctctgtc tctctctcct
     3601 ctctctctcc tctcctctct ctctctctct ctctctctct ctctctctct ctctctctct
     3661 ctctctctct ctctctctct ctctctctct catgtccctt atttagcata acaaagtaga
     3721 tgggaaaata ctcttgactc tgggctaccc aatagctctg ggattaaacc cagcatttcc
     3781 cactactacc agctaaccct tgggtttgtc tattgtttga ccccattctg tagccaatca
     3841 gagcctctct gtgggatgaa aactgatata gcagatcata tacacgtagc ccaaagtaag
     3901 acccagagac tacagaaact acaccaaaaa tgtcacatag tcctgacact taatgggaaa
     3961 tgatgccaag tatgggcact gtgccagaaa agggaatttc aaagtgcaca gatgcttgag
     4021 tgctctggtc cactagctgg agacttggga gagaagtctg cagccatagg gcatgaattt
     4081 gcagtatttt actgtaggtt ttctcttctc ctttgaagtt tctattttac aatattttga
     4141 gagttttaaa aataatccta tcacatctgg cccagaccca gataatgtat tctatcattt
     4201 ccattgagct gtaagagact ttgcccttac tattttaata tcctggattt aattaaaact
     4261 cccgttggtt cgtcacaaat gaaaacttgt ttttgatagt tttataaaac tgatactgat
     4321 gtcattaaaa aaatttgttt ttacaccagc aactttttgt ttttacattc ttggtgtaat
     4381 gtatccctcc atcttgtctt tttgtttaga gcaggtccat ttgaaccaag cagacagacc
     4441 tattaatggg cagcaatgac cttaccttta aggaatccag aggcttgagg gggcactcac
     4501 actgaggaag tgtgatgtac tgtagtgtct ttttctagag atgagtagtg gaagtcttgc
     4561 tgggttggca tttaaagcag aaaatgaaat gcctgcattg ctagtgatgc agcccagagc
     4621 aagggtttca cttctgcaaa gcagtgacct cgcaagagac attgtgtctg tcgagctatg
     4681 ctggacctcc ctggctcatt ctgatagagg atatacaaac aaacacaagg aaattgagct
     4741 tacaaagagc cattcttctg agtcgctgtc tgtctgtctg tctgtctgtc tgtctgtcta
     4801 cctaccttcc tgtctccccg cctcaccggt ttcctacccc tgtccaacaa gaccaaattt
     4861 tttaaagaaa taacttttga aaactgaaat ttttatgtat ttttgttatc tcatcaatgt
     4921 tcaccgcatc actttctgag gagaagatgt ttttagtagt ttcagttgct cagtgctttt
     4981 atctaaatgc agtgttttca gactgtgtat taaccacagc cacatgtttg attgcgcctc
     5041 cctagtcact ggtgtctgcc tatctttggt aaattcatta ccatctccaa attgcctaaa
     5101 gtcctagtaa ataatagctc aggggatttc tattcatcac tactagaagg gcgctgtggt
     5161 atgctttggt actttgggca gtgagcagct gcgggacttg tcattgctct agaacaagaa
     5221 caccggatgg atctgccaca ctagtcgtgt ttcacactgt ggagcagttt ggcttgtgca
     5281 tccgtggcgc ttgttgagga actcatccct ttgtggtgtc gtaacatgac ggtagagtgc
     5341 ctttttatat ttgtatatcc tggaaacgtt ctgtgaaaca ttttgtattt tttcatttga
     5401 gtgttatcgg agcaatataa tcctagtggg cttttctttc tttgactgta ccaagtgtcg
     5461 cctttcctct tcctcccctt ctctgctgtg aaatgaaaat gctcaagttt tctataggaa
     5521 ttatgtttga ctttgcagta ctgaaatgct ttcttcttac cgaactgtaa accataggtc
     5581 agtattatag gaggacagcg ttttaagata gtgacaatct gagcgtgttt gtaagatgta
     5641 attctgtgtg tttcctaccc ggtgatctga agactcgagg cgaggatctt ttgtttagca
     5701 gttttgtctc cagaccacgc ttcagcatgt gcaatatatc cttgcaaagc acggtgatac
     5761 acatcttatg ccagtgttac attttgtaaa acgtgtttgt aacagcataa actattatgt
     5821 gatgatttca gtgggatttt ttcgtctgta attttaagat gtagattgga gttgagtgac
     5881 tttggtaaac gtcctgagtg taaaaaatga ggaaaaatgg cattgggttc agtgaaggac
     5941 tttggaccag tgtgaatctt cccaagcaca ggttaatact ttcccaacta ctgagtgctc
     6001 taatatgcaa tgaagtactt acctgtaaca tacgatggac atgcattcag atggttattt
     6061 ttacaaataa aaacggtaca aatattgttg caa
//
