LOCUS       XM_345258               3386 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ankyrin repeat domain 35 (Ankrd35),
            transcript variant X1, mRNA.
ACCESSION   XM_345258
VERSION     XM_345258.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_345258.10.
            
            On Jan 21, 2021 this sequence version replaced XM_345258.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3386
                     /gene="Ankrd35"
                     /note="ankyrin repeat domain 35; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 5 ESTs, 3 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     4 samples with support for all annotated introns"
                     /db_xref="GeneID:365881"
                     /db_xref="RGD:1305527"
     CDS             180..3152
                     /gene="Ankrd35"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 35
                     isoform X1"
                     /protein_id="XP_345259.5"
                     /db_xref="GeneID:365881"
                     /db_xref="RGD:1305527"
                     /translation="MKRIFSCSSSQVAVEKWNRRDQKLLEAVQRGDVGRVAALASRKS
                     ARPTKLDSNGQSPFHLAASKGLTECLTILLANGADINSKNEDGSTALHLATISCQPQC
                     VKVLLQHGANEDAVDAENRSPLHWAASSGCASSVLLLCDHEAFLDVLDNDGRTPLMIA
                     SLGGHAAICSQLLQRGARVNVTDKDDKSALILACEKGSAEVAELLLSHGADAGAVDSL
                     GHNALHYALGTQDRELWRLLQQALNRRRRGGRELVQHPDHASQASSSESPWRAEPEEE
                     QEEEKGEERGSEEWRWKFEEEQRKVHQLEQELLQKTDECKARAAAFVSLENQIREQVQ
                     ELGYLLVQVPGAPRNQGPGLRPEGDGMEQGCPLNLLAEWIQELKKQQKATATINPTLV
                     PKRAEDLAPAETHYEVPGKFQPEQGLSQSPRSETIGKATGQQLNTNGEQNLDLDNTEQ
                     VCADQKERALAPGTEPAVTVGEPVGIAAMNQLLLQLREELAAVWREKDAARGALSRPV
                     LEGALGTPRAEAAAAAWEKMEARLEKVLVRLDGAKMGLHVKPEVPAQGSRDGAPKIVQ
                     GCTKEQEGKRAPGARGEPLGAPGGEQALGGGLAKGQLEKEVSALRLSNSNLLEELEEL
                     GRERQRLQGELQSLTQKLQREFVPKPEAQVQLQQLRRSVGLLTEELAIEKEATEKLRR
                     RLASQTSGLQGLWNCFPPDLVGKGSARSTAAEPLEELQACISTLVDRHLESQQVQARL
                     EEENQRLRGSLPPCGEPEASLKATASPQVAALEEDLGKLEEELRAVQATMSGKSQEIC
                     KLKQLLYQATEEVAELRAREAASLRQHEKTRGSLVAQAQAWGQELKVMLEKYNTACRE
                     MTRLRDTAAEERRRSEELAARAAEQERQAGEMRGRSEQFEKTAELLKEKTNHLIGACR
                     DKESKIKELLKKLEQLSEEVLEVRAENTHLVLQLQDTQKNHEEIISTYRNHLLNAARG
                     YMEQDVYNILLRILSVQE"
ORIGIN      
        1 gagggttgga atatagagtg gagctccacg cagaaaggcg aggaacttag ggcctggaag
       61 tcacctctgc agcagagcct gcgagcatcc ttttcggatt tgtagtagca gagtgggttt
      121 aggaacctgt ggcccggctc tctgcgcgtc cccgtccccc cgtggcccta gccccggcca
      181 tgaagcgcat cttctcctgc tccagttcac aagtggcggt ggagaaatgg aaccgccgtg
      241 atcagaagct gctggaggcg gtacagcggg gggacgtggg acgcgtggct gccttggcct
      301 ctaggaagtc agcccgaccc accaaactag actcaaatgg ccagtccccg ttccatctgg
      361 cagcctccaa aggcctgaca gagtgtctga cgatactgct tgcaaacggg gctgatatca
      421 acagcaagaa cgaggacgga agcaccgccc ttcatttggc caccatctcc tgtcagccgc
      481 agtgtgtgaa ggtcttgctt cagcatggtg ctaatgaaga cgccgtggat gcagaaaatc
      541 gcagtccgtt acactgggca gcctcctctg gctgcgcttc aagtgtcctc ctgctgtgtg
      601 accacgaagc cttcctggat gtgctggata atgatggacg cacacccctg atgattgcat
      661 cgctgggtgg tcatgcagct atctgctcac agctgctgca gagaggtgcc cgagtcaatg
      721 tcacagacaa ggatgacaaa tcagctttga tcctggcctg tgagaaaggc agcgctgagg
      781 tggctgagct gctcctgagc catggagcag acgctggagc ggtggacagc ttggggcaca
      841 atgctcttca ttatgctttg ggtacacaag acagggaact ctggaggctg ctacagcagg
      901 ccctgaaccg gcggcggaga ggaggtcgtg aactggttca acacccagat cacgcctctc
      961 aggcttcttc atctgagagc ccatggagag cagagcctga ggaagagcag gaggaagaga
     1021 agggggagga gcggggctcg gaagagtgga ggtggaagtt tgaagaggag cagaggaaag
     1081 ttcatcagct ggagcaggag ctcctgcaaa agacagatga gtgtaaggct cgagctgcag
     1141 ccttcgtaag cctagagaac cagattcgag agcaagtgca agaactaggc tatctcctgg
     1201 tgcaagtacc tggagctcca agaaatcaag gccctggcct tcggccggaa ggagatggca
     1261 tggagcaggg ctgtcccctg aacctgctgg ctgagtggat ccaagagcta aagaagcagc
     1321 agaaggcaac agccacaata aacccaacgt tagttccaaa gagagctgaa gacttagccc
     1381 cagcagagac ccattatgaa gtaccgggaa agttccaacc agaacaggga ctgtcccaga
     1441 gcccaaggtc tgagaccatc gggaaagcca caggacagca gctgaacacc aatggggaac
     1501 agaaccttga cctcgataac actgagcagg tgtgtgctga ccagaaggag agggccctgg
     1561 cccccgggac tgaaccagca gtcacagtgg gagaaccagt gggtatagca gccatgaacc
     1621 agctcctcct acagctaagg gaagagctgg ctgcagtgtg gcgagaaaag gatgctgcca
     1681 gaggggcttt gtcaagacca gttctggagg gagccctggg gactcccagg gctgaggctg
     1741 cagcagctgc ctgggaaaag atggaagcca ggcttgagaa ggtgctggtg aggttggatg
     1801 gagcgaagat gggactgcat gtaaaacctg aggttcctgc ccaggggtca agagacggag
     1861 caccaaagat agtccaggga tgcactaaag agcaggaagg aaagagggct cctggagcca
     1921 gaggagagcc cttaggggcc cctggagggg aacaggcctt aggaggaggc ctggcaaagg
     1981 gacagctgga gaaagaggtg tcagctctga gactgagcaa tagcaatttg ctggaggaat
     2041 tggaagagtt ggggcgtgag agacaacggt tgcagggaga gctgcagtcc ttgacccaga
     2101 agctacaacg ggagtttgtg cccaagcccg aggcacaggt ccagctacag cagttgcgaa
     2161 ggagcgtggg gttgttgaca gaggaactgg ccatcgagaa ggaggccaca gagaagctgc
     2221 gcagacgact ggcctcccag accagcggcc tccaaggact gtggaactgc tttcccccag
     2281 acctcgtggg caaggggagt gcacggagta cagctgcgga acccttggag gagctgcagg
     2341 cctgcatcag taccctggtg gataggcacc tcgagtccca acaggtgcag gctcggttgg
     2401 aggaggaaaa ccagcggctg aggggatcct tgcctccctg cggggagccc gaggcctccc
     2461 tgaaggctac agcatccccg caggtggccg ccctagagga ggatctgggg aagctagagg
     2521 aagagctgcg agcggtgcag gccacgatga gcgggaagag ccaggagatc tgcaagctga
     2581 agcagctgct ctaccaagcc acggaagaag tggccgagct gagagctcgg gaagcagcca
     2641 gcctgcgaca gcacgagaag acgcgaggct cactggtggc ccaggcgcag gcttggggcc
     2701 aggagctcaa agttatgctg gagaagtaca acacagcctg tcgggaaatg actcgattgc
     2761 gggacaccgc agcggaggaa cgtcgccgca gcgaggaact ggcggctcgg gcggccgagc
     2821 aggagcgcca ggctggggaa atgcgcgggc gctcggagca gtttgagaaa actgctgagt
     2881 tgctgaaaga gaaaacaaac cacctcatcg gagcttgccg ggacaaggag tccaagatca
     2941 aggagttgtt gaagaagctg gagcagcttt cagaggaagt cctggaagtc cgtgcagaga
     3001 atacccacct tgtcctacag ctgcaggata cccagaagaa ccatgaagag atcatctcca
     3061 cttacagaaa tcatctactg aatgctgccc ggggctacat ggaacaagac gtctacaaca
     3121 tcctacttcg aatcctcagc gtgcaggagt gaggcaggct cctagcgacc gtcagggata
     3181 aaggcatttc ccttttggag taatgaggct ccatcaagct gtggtgggca ggcaggtggg
     3241 tggtgattac ccactggtgt tgctgtgggc ttcacgggac ccagggactc cagtcctgaa
     3301 aacctggacc ctggagtcag cacagatgag accagaattg tggatgtaaa ctagctccat
     3361 ggaaaataaa gcagaaaata gatgga
//
