LOCUS       NM_001191565            1791 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus ankyrin repeat domain 33B (Ankrd33b), mRNA.
ACCESSION   NM_001191565 XM_002729017
VERSION     NM_001191565.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jul 17, 2010 this sequence version replaced XM_002729017.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ232932.1, SRR26643287.5017.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-354               JAXUCZ010000002.1  84069226-84069579   c
            355-484             JAXUCZ010000002.1  84026631-84026760   c
            485-625             JAXUCZ010000002.1  84005842-84005982   c
            626-1791            JAXUCZ010000002.1  83993974-83995139   c
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q23"
     gene            1..1791
                     /gene="Ankrd33b"
                     /gene_synonym="RGD1564227"
                     /note="ankyrin repeat domain 33B"
                     /db_xref="GeneID:310200"
                     /db_xref="RGD:1564227"
     CDS             1..1446
                     /gene="Ankrd33b"
                     /gene_synonym="RGD1564227"
                     /codon_start=1
                     /product="ankyrin repeat domain-containing protein 33B"
                     /protein_id="NP_001178494.1"
                     /db_xref="GeneID:310200"
                     /db_xref="RGD:1564227"
                     /translation="MVLLAGPGPEGGGTRCLSPQSPTPPRSVQTGDDPADYEEYEDFS
                     SLPDTRSIASDDSFYPPGGEEECGSVCAESVPEGVPESATLLRAACANDVGLLRALVR
                     RGPSSEEARETDRNGRTGLIIACYHGFVDTVVALAECPHIDVNWQDSEGNTALITAAQ
                     AGHATITNYLLNYFPGLDLERRNIFGFTALMKAAMQGRTECVRALMLAGADVQARDPR
                     RGLSPQEWAAYTGRAEAVRVMQRLMERPCPEQFGDKYKLELPLPAETILKKAGSKNCL
                     QRFTAFLRSTLTSRSGQSLEDGGVLDHMVRMTTSLYSPAVAVVCQTVCPENPPCVGKR
                     RLAVQEILAARGNLDAQAQDSNNVELQSQILETPRASSRSPQSLGSGSTPAPVTRKAS
                     LLPLQLLRRSSVRPGVVVPRVRISKAPAPTFQPERAASKGNTKDSIYLQIPKWRYKEA
                     KEEKRKAEEAEKKRQAEAQKERRAPRWRKRT"
     exon            1..354
                     /gene="Ankrd33b"
                     /gene_synonym="RGD1564227"
                     /inference="alignment:Splign:2.1.0"
     exon            355..484
                     /gene="Ankrd33b"
                     /gene_synonym="RGD1564227"
                     /inference="alignment:Splign:2.1.0"
     exon            485..625
                     /gene="Ankrd33b"
                     /gene_synonym="RGD1564227"
                     /inference="alignment:Splign:2.1.0"
     exon            626..1791
                     /gene="Ankrd33b"
                     /gene_synonym="RGD1564227"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggtgctgc tggctgggcc cgggccggag ggcggcggga cacgctgctt gtccccacag
       61 tcgccgacgc caccccggag cgtacagaca ggggacgacc cagcggacta cgaggagtac
      121 gaagacttct cgagtctgcc ggacacccgc agcatcgcat cggacgattc cttctaccct
      181 ccgggaggcg aggaggagtg cggctcggtg tgcgcggaga gcgtcccgga gggcgtccct
      241 gagtcggcga ccctcctgcg cgccgcctgc gccaacgacg tggggctgct gcgggcgcta
      301 gtgcggcgcg gacctagttc cgaggaggca cgggagactg accgcaacgg ccggactggc
      361 cttattattg cgtgctacca tggctttgtg gataccgtgg tggccttagc agagtgtccc
      421 cacatcgacg tcaactggca ggacagcgaa gggaacacag ccctgatcac tgctgcccaa
      481 gcagggcatg ccaccatcac caactacttg ctgaattatt tccccggtct ggacctagaa
      541 aggaggaaca tattcggctt cacagctctc atgaaggcag ccatgcaggg tagaacagaa
      601 tgtgtgcgag ccctgatgct agcaggggca gacgttcaag caagggatcc ccgacgtggg
      661 ctgtcacctc aggagtgggc tgcatacaca ggccgagcgg aggctgttcg agtcatgcag
      721 aggctgatgg agcgaccctg cccagaacag tttggggaca agtataagct ggaattgcca
      781 cttcccgctg agacgatctt aaagaaggca ggttccaaaa actgcttgca gagattcacc
      841 gcattcctgc gatctacttt gacctcccgc tccggccaga gcctggagga tggaggcgtc
      901 cttgatcaca tggtcaggat gaccacaagt ctctacagcc ccgctgttgc tgtagtctgt
      961 cagaccgtgt gcccggagaa cccaccctgt gtggggaaac gacgcttggc ggtacaggaa
     1021 atcctagcag ctaggggcaa cctggacgcc caagcgcagg acagcaacaa cgtagagctg
     1081 caatcccaga ttttggagac tcccagagct agctcccggt ctccccagtc gctcggctcg
     1141 ggttccactc ctgctcctgt tactcggaag gccagcctcc tgcctttgca gttgctacgg
     1201 aggagcagtg tgcggccggg cgtggtggtc cctcgagtgc gcatcagcaa ggcccctgcg
     1261 cccaccttcc agccagagcg cgcagcgtcc aagggcaaca ccaaggacag catctatctg
     1321 cagatcccca agtggcggta caaagaggcc aaggaggaga agaggaaggc ggaggaggca
     1381 gagaagaagc gccaggcaga ggcacagaaa gaaaggcggg cgccacgctg gaggaaaagg
     1441 acgtgaaggg gctacgactc tcataggcct gtgcctggtg tggggaagca gcgcaggaat
     1501 cctgctggga ggctgcaagt gctggagaca gcaccgtgga gagggatgct cctgtctgct
     1561 acggggtgcg tgctgcgtca cacagcctcc gggccattca catcttctag atccacaaag
     1621 gacggtccac attgctccca agacagaact gggaaaagta caagtgattt tgtttaaaac
     1681 cagttccttg agcattctgt acactaagag gtcagtttac ctagaagtcg cccttaaaga
     1741 accccaatta agaattaaaa aaaaaaaaaa acaacccaac atatcacagg g
//
